data_3LPU # _model_server_result.job_id OtatgrbdiHU-GCUQhYNjLw _model_server_result.datetime_utc '2024-11-28 08:06:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lpu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":3}' # _entry.id 3LPU # _exptl.entry_id 3LPU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 106.12 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description DI(HYDROXYETHYL)ETHER _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LPU _cell.length_a 72.05 _cell.length_b 72.05 _cell.length_c 66.35 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LPU _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 18 A ASP 64 1_555 A N CAF 19 A CAF 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C CAF 19 A CAF 65 1_555 A N THR 20 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? covale ? covale3 A C ALA 83 A ALA 129 1_555 A N CAF 84 A CAF 130 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C CAF 84 A CAF 130 1_555 A N TRP 85 A TRP 131 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? # _chem_comp.formula 'C4 H10 O3' _chem_comp.formula_weight 106.12 _chem_comp.id PEG _chem_comp.mon_nstd_flag . _chem_comp.name DI(HYDROXYETHYL)ETHER _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEG sing 342 n n C1 C2 PEG sing 343 n n C1 H11 PEG sing 344 n n C1 H12 PEG sing 345 n n O1 HO1 PEG sing 346 n n C2 O2 PEG sing 347 n n C2 H21 PEG sing 348 n n C2 H22 PEG sing 349 n n O2 C3 PEG sing 350 n n C3 C4 PEG sing 351 n n C3 H31 PEG sing 352 n n C3 H32 PEG sing 353 n n C4 O4 PEG sing 354 n n C4 H41 PEG sing 355 n n C4 H42 PEG sing 356 n n O4 HO4 PEG sing 357 n n # _atom_sites.entry_id 3LPU _atom_sites.fract_transf_matrix[1][1] 0.013879 _atom_sites.fract_transf_matrix[1][2] 0.008013 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016026 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015072 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 976 A 1 1 1 976 976 . C 3 P03 A 1 213 1 P03 P03 . D 4 PEG A 1 2 2 PEG P01 . E 4 PEG A 1 3 3 PEG P01 . F 5 SO4 A 1 497 497 SO4 SO4 . G 5 SO4 A 1 498 498 SO4 SO4 . H 5 SO4 A 1 499 499 SO4 SO4 . I 6 CA A 1 500 500 CA CA . J 7 HOH A 1 304 304 HOH HOH . J 7 HOH A 2 305 305 HOH HOH . J 7 HOH A 3 306 306 HOH HOH . J 7 HOH A 4 307 307 HOH HOH . J 7 HOH A 5 308 308 HOH HOH . J 7 HOH A 6 309 309 HOH HOH . J 7 HOH A 7 310 310 HOH HOH . J 7 HOH A 8 312 312 HOH HOH . J 7 HOH A 9 313 313 HOH HOH . J 7 HOH A 10 314 314 HOH HOH . J 7 HOH A 11 315 315 HOH HOH . J 7 HOH A 12 316 316 HOH HOH . J 7 HOH A 13 317 317 HOH HOH . J 7 HOH A 14 320 320 HOH HOH . J 7 HOH A 15 321 321 HOH HOH . J 7 HOH A 16 322 322 HOH HOH . J 7 HOH A 17 324 324 HOH HOH . J 7 HOH A 18 326 326 HOH HOH . J 7 HOH A 19 327 327 HOH HOH . J 7 HOH A 20 330 330 HOH HOH . J 7 HOH A 21 333 333 HOH HOH . J 7 HOH A 22 336 336 HOH HOH . J 7 HOH A 23 339 339 HOH HOH . J 7 HOH A 24 341 341 HOH HOH . J 7 HOH A 25 344 344 HOH HOH . J 7 HOH A 26 345 345 HOH HOH . J 7 HOH A 27 347 347 HOH HOH . J 7 HOH A 28 349 349 HOH HOH . J 7 HOH A 29 350 350 HOH HOH . J 7 HOH A 30 351 351 HOH HOH . J 7 HOH A 31 352 352 HOH HOH . J 7 HOH A 32 354 354 HOH HOH . J 7 HOH A 33 356 356 HOH HOH . J 7 HOH A 34 358 358 HOH HOH . J 7 HOH A 35 360 360 HOH HOH . J 7 HOH A 36 361 361 HOH HOH . J 7 HOH A 37 362 362 HOH HOH . J 7 HOH A 38 363 363 HOH HOH . J 7 HOH A 39 366 366 HOH HOH . J 7 HOH A 40 371 371 HOH HOH . J 7 HOH A 41 373 373 HOH HOH . J 7 HOH A 42 377 377 HOH HOH . J 7 HOH A 43 379 379 HOH HOH . J 7 HOH A 44 381 381 HOH HOH . J 7 HOH A 45 384 384 HOH HOH . J 7 HOH A 46 386 386 HOH HOH . J 7 HOH A 47 388 388 HOH HOH . J 7 HOH A 48 389 389 HOH HOH . J 7 HOH A 49 390 390 HOH HOH . J 7 HOH A 50 392 392 HOH HOH . J 7 HOH A 51 394 394 HOH HOH . J 7 HOH A 52 395 395 HOH HOH . J 7 HOH A 53 396 396 HOH HOH . J 7 HOH A 54 397 397 HOH HOH . J 7 HOH A 55 400 400 HOH HOH . J 7 HOH A 56 401 401 HOH HOH . J 7 HOH A 57 402 402 HOH HOH . J 7 HOH A 58 403 403 HOH HOH . J 7 HOH A 59 404 404 HOH HOH . J 7 HOH A 60 405 405 HOH HOH . J 7 HOH A 61 406 406 HOH HOH . J 7 HOH A 62 407 407 HOH HOH . J 7 HOH A 63 408 408 HOH HOH . J 7 HOH A 64 410 410 HOH HOH . J 7 HOH A 65 411 411 HOH HOH . J 7 HOH A 66 412 412 HOH HOH . J 7 HOH A 67 413 413 HOH HOH . J 7 HOH A 68 414 414 HOH HOH . J 7 HOH A 69 415 415 HOH HOH . J 7 HOH A 70 416 416 HOH HOH . J 7 HOH A 71 418 418 HOH HOH . J 7 HOH A 72 420 420 HOH HOH . J 7 HOH A 73 421 421 HOH HOH . J 7 HOH A 74 423 423 HOH HOH . J 7 HOH A 75 425 425 HOH HOH . J 7 HOH A 76 427 427 HOH HOH . J 7 HOH A 77 428 428 HOH HOH . J 7 HOH A 78 429 429 HOH HOH . J 7 HOH A 79 430 430 HOH HOH . J 7 HOH A 80 431 431 HOH HOH . J 7 HOH A 81 432 432 HOH HOH . J 7 HOH A 82 434 434 HOH HOH . J 7 HOH A 83 435 435 HOH HOH . J 7 HOH A 84 441 441 HOH HOH . J 7 HOH A 85 449 449 HOH HOH . J 7 HOH A 86 450 450 HOH HOH . J 7 HOH A 87 451 451 HOH HOH . J 7 HOH A 88 452 452 HOH HOH . J 7 HOH A 89 453 453 HOH HOH . J 7 HOH A 90 454 454 HOH HOH . J 7 HOH A 91 455 455 HOH HOH . J 7 HOH A 92 456 456 HOH HOH . J 7 HOH A 93 457 457 HOH HOH . J 7 HOH A 94 458 458 HOH HOH . J 7 HOH A 95 459 459 HOH HOH . J 7 HOH A 96 460 460 HOH HOH . J 7 HOH A 97 461 461 HOH HOH . J 7 HOH A 98 462 462 HOH HOH . J 7 HOH A 99 463 463 HOH HOH . J 7 HOH A 100 464 464 HOH HOH . J 7 HOH A 101 465 465 HOH HOH . J 7 HOH A 102 466 466 HOH HOH . J 7 HOH A 103 467 467 HOH HOH . J 7 HOH A 104 468 468 HOH HOH . J 7 HOH A 105 470 470 HOH HOH . J 7 HOH A 106 471 471 HOH HOH . J 7 HOH A 107 472 472 HOH HOH . J 7 HOH A 108 473 473 HOH HOH . J 7 HOH A 109 474 474 HOH HOH . J 7 HOH A 110 476 476 HOH HOH . J 7 HOH A 111 477 477 HOH HOH . J 7 HOH A 112 478 478 HOH HOH . J 7 HOH A 113 479 479 HOH HOH . J 7 HOH A 114 480 480 HOH HOH . J 7 HOH A 115 481 481 HOH HOH . J 7 HOH A 116 482 482 HOH HOH . J 7 HOH A 117 483 483 HOH HOH . J 7 HOH A 118 484 484 HOH HOH . J 7 HOH A 119 485 485 HOH HOH . J 7 HOH A 120 486 486 HOH HOH . J 7 HOH A 121 487 487 HOH HOH . J 7 HOH A 122 492 492 HOH HOH . J 7 HOH A 123 494 494 HOH HOH . J 7 HOH A 124 495 495 HOH HOH . J 7 HOH A 125 496 496 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEG . . . E 4 14.557 18.387 -15.526 1 72.47 ? C1 PEG 3 A 1 HETATM 2 O O1 PEG . . . E 4 13.941 18.626 -16.8 1 72.32 ? O1 PEG 3 A 1 HETATM 3 C C2 PEG . . . E 4 14.919 16.907 -15.379 1 72.6 ? C2 PEG 3 A 1 HETATM 4 O O2 PEG . . . E 4 16.324 16.852 -15.043 1 72.81 ? O2 PEG 3 A 1 HETATM 5 C C3 PEG . . . E 4 16.879 18.171 -15.125 1 73.18 ? C3 PEG 3 A 1 HETATM 6 C C4 PEG . . . E 4 18.336 18.116 -15.576 1 73.59 ? C4 PEG 3 A 1 HETATM 7 O O4 PEG . . . E 4 19.108 19.073 -14.837 1 73.24 ? O4 PEG 3 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 7 #