data_3LQW # _model_server_result.job_id 3WuqPLm8YlPnOdq4kA8JUg _model_server_result.datetime_utc '2025-07-02 06:28:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lqw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":150}' # _entry.id 3LQW # _exptl.entry_id 3LQW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LQW _cell.length_a 63.14 _cell.length_b 63.14 _cell.length_c 108.37 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LQW _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 138 n n C1 C2 GOL sing 139 n n C1 H11 GOL sing 140 n n C1 H12 GOL sing 141 n n O1 HO1 GOL sing 142 n n C2 O2 GOL sing 143 n n C2 C3 GOL sing 144 n n C2 H2 GOL sing 145 n n O2 HO2 GOL sing 146 n n C3 O3 GOL sing 147 n n C3 H31 GOL sing 148 n n C3 H32 GOL sing 149 n n O3 HO3 GOL sing 150 n n # _atom_sites.entry_id 3LQW _atom_sites.fract_transf_matrix[1][1] 0.015838 _atom_sites.fract_transf_matrix[1][2] 0.009144 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018288 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009228 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 151 151 EDO EDO . C 3 GOL A 1 150 150 GOL GOL . D 4 HOH A 1 143 143 HOH HOH . D 4 HOH A 2 144 144 HOH HOH . D 4 HOH A 3 145 145 HOH HOH . D 4 HOH A 4 146 146 HOH HOH . D 4 HOH A 5 147 147 HOH HOH . D 4 HOH A 6 148 148 HOH HOH . D 4 HOH A 7 149 149 HOH HOH . D 4 HOH A 8 152 152 HOH HOH . D 4 HOH A 9 153 153 HOH HOH . D 4 HOH A 10 154 154 HOH HOH . D 4 HOH A 11 155 155 HOH HOH . D 4 HOH A 12 156 156 HOH HOH . D 4 HOH A 13 157 157 HOH HOH . D 4 HOH A 14 158 158 HOH HOH . D 4 HOH A 15 159 159 HOH HOH . D 4 HOH A 16 160 160 HOH HOH . D 4 HOH A 17 161 161 HOH HOH . D 4 HOH A 18 162 162 HOH HOH . D 4 HOH A 19 163 163 HOH HOH . D 4 HOH A 20 164 164 HOH HOH . D 4 HOH A 21 165 165 HOH HOH . D 4 HOH A 22 166 166 HOH HOH . D 4 HOH A 23 167 167 HOH HOH . D 4 HOH A 24 168 168 HOH HOH . D 4 HOH A 25 169 169 HOH HOH . D 4 HOH A 26 170 170 HOH HOH . D 4 HOH A 27 171 171 HOH HOH . D 4 HOH A 28 172 172 HOH HOH . D 4 HOH A 29 173 173 HOH HOH . D 4 HOH A 30 174 174 HOH HOH . D 4 HOH A 31 175 175 HOH HOH . D 4 HOH A 32 176 176 HOH HOH . D 4 HOH A 33 177 177 HOH HOH . D 4 HOH A 34 178 178 HOH HOH . D 4 HOH A 35 179 179 HOH HOH . D 4 HOH A 36 180 180 HOH HOH . D 4 HOH A 37 181 181 HOH HOH . D 4 HOH A 38 182 182 HOH HOH . D 4 HOH A 39 183 183 HOH HOH . D 4 HOH A 40 184 184 HOH HOH . D 4 HOH A 41 185 185 HOH HOH . D 4 HOH A 42 186 186 HOH HOH . D 4 HOH A 43 187 187 HOH HOH . D 4 HOH A 44 188 188 HOH HOH . D 4 HOH A 45 189 189 HOH HOH . D 4 HOH A 46 190 190 HOH HOH . D 4 HOH A 47 191 191 HOH HOH . D 4 HOH A 48 192 192 HOH HOH . D 4 HOH A 49 193 193 HOH HOH . D 4 HOH A 50 194 194 HOH HOH . D 4 HOH A 51 195 195 HOH HOH . D 4 HOH A 52 196 196 HOH HOH . D 4 HOH A 53 197 197 HOH HOH . D 4 HOH A 54 198 198 HOH HOH . D 4 HOH A 55 199 199 HOH HOH . D 4 HOH A 56 200 200 HOH HOH . D 4 HOH A 57 201 201 HOH HOH . D 4 HOH A 58 202 202 HOH HOH . D 4 HOH A 59 203 203 HOH HOH . D 4 HOH A 60 204 204 HOH HOH . D 4 HOH A 61 205 205 HOH HOH . D 4 HOH A 62 206 206 HOH HOH . D 4 HOH A 63 207 207 HOH HOH . D 4 HOH A 64 208 208 HOH HOH . D 4 HOH A 65 209 209 HOH HOH . D 4 HOH A 66 210 210 HOH HOH . D 4 HOH A 67 211 211 HOH HOH . D 4 HOH A 68 212 212 HOH HOH . D 4 HOH A 69 213 213 HOH HOH . D 4 HOH A 70 214 214 HOH HOH . D 4 HOH A 71 215 215 HOH HOH . D 4 HOH A 72 216 216 HOH HOH . D 4 HOH A 73 217 217 HOH HOH . D 4 HOH A 74 218 218 HOH HOH . D 4 HOH A 75 219 219 HOH HOH . D 4 HOH A 76 220 220 HOH HOH . D 4 HOH A 77 221 221 HOH HOH . D 4 HOH A 78 222 222 HOH HOH . D 4 HOH A 79 223 223 HOH HOH . D 4 HOH A 80 224 224 HOH HOH . D 4 HOH A 81 225 225 HOH HOH . D 4 HOH A 82 226 226 HOH HOH . D 4 HOH A 83 227 227 HOH HOH . D 4 HOH A 84 228 228 HOH HOH . D 4 HOH A 85 229 229 HOH HOH . D 4 HOH A 86 230 230 HOH HOH . D 4 HOH A 87 231 231 HOH HOH . D 4 HOH A 88 232 232 HOH HOH . D 4 HOH A 89 233 233 HOH HOH . D 4 HOH A 90 234 234 HOH HOH . D 4 HOH A 91 235 235 HOH HOH . D 4 HOH A 92 236 236 HOH HOH . D 4 HOH A 93 237 237 HOH HOH . D 4 HOH A 94 238 238 HOH HOH . D 4 HOH A 95 239 239 HOH HOH . D 4 HOH A 96 240 240 HOH HOH . D 4 HOH A 97 241 241 HOH HOH . D 4 HOH A 98 242 242 HOH HOH . D 4 HOH A 99 243 243 HOH HOH . D 4 HOH A 100 244 244 HOH HOH . D 4 HOH A 101 245 245 HOH HOH . D 4 HOH A 102 246 246 HOH HOH . D 4 HOH A 103 247 247 HOH HOH . D 4 HOH A 104 248 248 HOH HOH . D 4 HOH A 105 249 249 HOH HOH . D 4 HOH A 106 250 250 HOH HOH . D 4 HOH A 107 251 251 HOH HOH . D 4 HOH A 108 252 252 HOH HOH . D 4 HOH A 109 253 253 HOH HOH . D 4 HOH A 110 254 254 HOH HOH . D 4 HOH A 111 255 255 HOH HOH . D 4 HOH A 112 256 256 HOH HOH . D 4 HOH A 113 257 257 HOH HOH . D 4 HOH A 114 258 258 HOH HOH . D 4 HOH A 115 259 259 HOH HOH . D 4 HOH A 116 260 260 HOH HOH . D 4 HOH A 117 261 261 HOH HOH . D 4 HOH A 118 262 262 HOH HOH . D 4 HOH A 119 263 263 HOH HOH . D 4 HOH A 120 264 264 HOH HOH . D 4 HOH A 121 265 265 HOH HOH . D 4 HOH A 122 266 266 HOH HOH . D 4 HOH A 123 267 267 HOH HOH . D 4 HOH A 124 268 268 HOH HOH . D 4 HOH A 125 269 269 HOH HOH . D 4 HOH A 126 270 270 HOH HOH . D 4 HOH A 127 271 271 HOH HOH . D 4 HOH A 128 272 272 HOH HOH . D 4 HOH A 129 273 273 HOH HOH . D 4 HOH A 130 274 274 HOH HOH . D 4 HOH A 131 275 275 HOH HOH . D 4 HOH A 132 276 276 HOH HOH . D 4 HOH A 133 277 277 HOH HOH . D 4 HOH A 134 278 278 HOH HOH . D 4 HOH A 135 279 279 HOH HOH . D 4 HOH A 136 280 280 HOH HOH . D 4 HOH A 137 281 281 HOH HOH . D 4 HOH A 138 282 282 HOH HOH . D 4 HOH A 139 283 283 HOH HOH . D 4 HOH A 140 284 284 HOH HOH . D 4 HOH A 141 285 285 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 0.686 1.302 98.71 0.33 6.78 ? C1 GOL 150 A 1 HETATM 2 O O1 GOL . . . C 3 2.075 1.313 99.027 0.33 6.1 ? O1 GOL 150 A 1 HETATM 3 C C2 GOL . . . C 3 -0.01 0.044 99.245 0.33 9.24 ? C2 GOL 150 A 1 HETATM 4 O O2 GOL . . . C 3 -0.016 0.027 100.689 0.33 13.11 ? O2 GOL 150 A 1 HETATM 5 C C3 GOL . . . C 3 -1.443 -0.043 98.704 0.33 7.22 ? C3 GOL 150 A 1 HETATM 6 O O3 GOL . . . C 3 -2.177 1.129 99.034 0.33 6.79 ? O3 GOL 150 A 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #