data_3LSY # _model_server_result.job_id HqT9Ctx27xCrM5QADPoCdw _model_server_result.datetime_utc '2024-10-28 15:34:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lsy # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 3LSY # _exptl.entry_id 3LSY _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 214.217 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-hydroxy-4-phenoxybenzaldehyde _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LSY _cell.length_a 132.035 _cell.length_b 132.035 _cell.length_c 83.026 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LSY _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z+1/2 0 -1 0 -1 0 0 0 0 -1 132.035 132.035 41.513 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N # _chem_comp.formula 'C13 H10 O3' _chem_comp.formula_weight 214.217 _chem_comp.id FT0 _chem_comp.mon_nstd_flag . _chem_comp.name 3-hydroxy-4-phenoxybenzaldehyde _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 FT0 doub 83 n y C1 C6 FT0 sing 84 n y C1 O7 FT0 sing 85 n n C2 C3 FT0 sing 86 n y C2 O16 FT0 sing 87 n n C3 C4 FT0 doub 88 n y C4 C5 FT0 sing 89 n y C4 C14 FT0 sing 90 n n C5 C6 FT0 doub 91 n y O7 C8 FT0 sing 92 n n C8 C9 FT0 doub 93 n y C8 C13 FT0 sing 94 n y C9 C10 FT0 sing 95 n y C10 C11 FT0 doub 96 n y C11 C12 FT0 sing 97 n y C12 C13 FT0 doub 98 n y C14 O15 FT0 doub 99 n n C3 H3 FT0 sing 100 n n C5 H5 FT0 sing 101 n n C6 H6 FT0 sing 102 n n C9 H9 FT0 sing 103 n n C10 H10 FT0 sing 104 n n C11 H11 FT0 sing 105 n n C12 H12 FT0 sing 106 n n C13 H13 FT0 sing 107 n n C14 H14 FT0 sing 108 n n O16 HO16 FT0 sing 109 n n # _atom_sites.entry_id 3LSY _atom_sites.fract_transf_matrix[1][1] 0.007574 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007574 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012044 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 501 501 NAD NAD . D 3 FT0 A 1 502 502 FT0 FT0 . E 2 NAD B 1 601 601 NAD NAD . F 3 FT0 B 1 602 602 FT0 FT0 . G 4 HOH A 1 1 1 HOH HOH . G 4 HOH A 2 2 2 HOH HOH . G 4 HOH A 3 3 3 HOH HOH . G 4 HOH A 4 4 4 HOH HOH . G 4 HOH A 5 5 5 HOH HOH . G 4 HOH A 6 6 6 HOH HOH . G 4 HOH A 7 10 10 HOH HOH . G 4 HOH A 8 11 11 HOH HOH . G 4 HOH A 9 15 15 HOH HOH . G 4 HOH A 10 20 20 HOH HOH . G 4 HOH A 11 31 31 HOH HOH . G 4 HOH A 12 33 33 HOH HOH . G 4 HOH A 13 34 34 HOH HOH . G 4 HOH A 14 35 35 HOH HOH . G 4 HOH A 15 37 37 HOH HOH . G 4 HOH A 16 40 40 HOH HOH . G 4 HOH A 17 41 41 HOH HOH . G 4 HOH A 18 42 42 HOH HOH . G 4 HOH A 19 43 43 HOH HOH . G 4 HOH A 20 46 46 HOH HOH . G 4 HOH A 21 47 47 HOH HOH . G 4 HOH A 22 48 48 HOH HOH . H 4 HOH B 1 7 7 HOH HOH . H 4 HOH B 2 8 8 HOH HOH . H 4 HOH B 3 9 9 HOH HOH . H 4 HOH B 4 12 12 HOH HOH . H 4 HOH B 5 13 13 HOH HOH . H 4 HOH B 6 14 14 HOH HOH . H 4 HOH B 7 16 16 HOH HOH . H 4 HOH B 8 17 17 HOH HOH . H 4 HOH B 9 18 18 HOH HOH . H 4 HOH B 10 19 19 HOH HOH . H 4 HOH B 11 21 21 HOH HOH . H 4 HOH B 12 22 22 HOH HOH . H 4 HOH B 13 23 23 HOH HOH . H 4 HOH B 14 24 24 HOH HOH . H 4 HOH B 15 25 25 HOH HOH . H 4 HOH B 16 26 26 HOH HOH . H 4 HOH B 17 27 27 HOH HOH . H 4 HOH B 18 28 28 HOH HOH . H 4 HOH B 19 29 29 HOH HOH . H 4 HOH B 20 30 30 HOH HOH . H 4 HOH B 21 32 32 HOH HOH . H 4 HOH B 22 36 36 HOH HOH . H 4 HOH B 23 38 38 HOH HOH . H 4 HOH B 24 39 39 HOH HOH . H 4 HOH B 25 44 44 HOH HOH . H 4 HOH B 26 45 45 HOH HOH . H 4 HOH B 27 49 49 HOH HOH . H 4 HOH B 28 50 50 HOH HOH . H 4 HOH B 29 51 51 HOH HOH . H 4 HOH B 30 52 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FT0 . . . D 3 50.673 92.856 34.396 0.9 55.88 ? C1 FT0 502 A 1 HETATM 2 C C2 FT0 . . . D 3 49.724 93.323 33.504 0.9 55.55 ? C2 FT0 502 A 1 HETATM 3 C C3 FT0 . . . D 3 49.421 94.679 33.434 0.9 54.89 ? C3 FT0 502 A 1 HETATM 4 C C4 FT0 . . . D 3 50.083 95.58 34.265 0.9 54.89 ? C4 FT0 502 A 1 HETATM 5 C C5 FT0 . . . D 3 51.049 95.126 35.172 0.9 54.97 ? C5 FT0 502 A 1 HETATM 6 C C6 FT0 . . . D 3 51.345 93.762 35.235 0.9 55.23 ? C6 FT0 502 A 1 HETATM 7 O O7 FT0 . . . D 3 50.926 91.495 34.418 0.9 55.33 ? O7 FT0 502 A 1 HETATM 8 C C8 FT0 . . . D 3 52.067 91.011 33.832 0.9 53.89 ? C8 FT0 502 A 1 HETATM 9 C C9 FT0 . . . D 3 52.52 89.731 34.143 0.9 53.63 ? C9 FT0 502 A 1 HETATM 10 C C10 FT0 . . . D 3 53.689 89.236 33.547 0.9 53.49 ? C10 FT0 502 A 1 HETATM 11 C C11 FT0 . . . D 3 54.417 90.024 32.653 0.9 52.92 ? C11 FT0 502 A 1 HETATM 12 C C12 FT0 . . . D 3 53.965 91.308 32.348 0.9 52.87 ? C12 FT0 502 A 1 HETATM 13 C C13 FT0 . . . D 3 52.791 91.795 32.931 0.9 53.55 ? C13 FT0 502 A 1 HETATM 14 C C14 FT0 . . . D 3 49.757 97.015 34.159 0.9 52.77 ? C14 FT0 502 A 1 HETATM 15 O O15 FT0 . . . D 3 49.272 97.545 35.13 0.9 52.73 ? O15 FT0 502 A 1 HETATM 16 O O16 FT0 . . . D 3 49.088 92.434 32.697 0.9 55.57 ? O16 FT0 502 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 20 _model_server_stats.query_time_ms 292 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 16 #