data_3LUQ # _model_server_result.job_id tCnDAoWCSdDeC9QvgzW6Xw _model_server_result.datetime_utc '2025-03-04 15:13:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3luq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":201}' # _entry.id 3LUQ # _exptl.entry_id 3LUQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 113.05 _cell.angle_gamma 90 _cell.entry_id 3LUQ _cell.length_a 62.545 _cell.length_b 71.971 _cell.length_c 67.374 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LUQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? tetrameric 4 author_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 1 1 A,B,C,E,F,G,H,I,J,K,L,M,N,O 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 78 A CYS 164 1_555 C SG CYS 78 C CYS 164 1_556 ? ? ? ? ? ? ? ? ? ? ? ? 2.972 ? disulf ? disulf2 B SG CYS 78 B CYS 164 1_555 D SG CYS 78 D CYS 164 1_656 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? covale ? covale1 A C ALA 17 A ALA 103 1_555 A N MSE 18 A MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale2 A C MSE 18 A MSE 104 1_555 A N PHE 19 A PHE 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale3 A C GLU 22 A GLU 108 1_555 A N MSE 23 A MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.306 ? covale ? covale4 A C MSE 23 A MSE 109 1_555 A N ARG 24 A ARG 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale5 A C GLY 45 A GLY 131 1_555 A N MSE 46 A MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale6 A C MSE 46 A MSE 132 1_555 A N SER 47 A SER 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale7 B C ALA 17 B ALA 103 1_555 B N MSE 18 B MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.317 ? covale ? covale8 B C MSE 18 B MSE 104 1_555 B N PHE 19 B PHE 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale9 B C GLU 22 B GLU 108 1_555 B N MSE 23 B MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale10 B C MSE 23 B MSE 109 1_555 B N ARG 24 B ARG 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale11 B C GLY 45 B GLY 131 1_555 B N MSE 46 B MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.31 ? covale ? covale12 B C MSE 46 B MSE 132 1_555 B N SER 47 B SER 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.306 ? covale ? covale13 C C ALA 17 C ALA 103 1_555 C N MSE 18 C MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale14 C C MSE 18 C MSE 104 1_555 C N PHE 19 C PHE 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.312 ? covale ? covale15 C C GLU 22 C GLU 108 1_555 C N MSE 23 C MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale16 C C MSE 23 C MSE 109 1_555 C N ARG 24 C ARG 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? covale ? covale17 C C GLY 45 C GLY 131 1_555 C N MSE 46 C MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.314 ? covale ? covale18 C C MSE 46 C MSE 132 1_555 C N SER 47 C SER 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.316 ? covale ? covale19 D C ALA 17 D ALA 103 1_555 D N MSE 18 D MSE 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale20 D C MSE 18 D MSE 104 1_555 D N PHE 19 D PHE 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale21 D C GLU 22 D GLU 108 1_555 D N MSE 23 D MSE 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.322 ? covale ? covale22 D C MSE 23 D MSE 109 1_555 D N ARG 24 D ARG 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.306 ? covale ? covale23 D C GLY 45 D GLY 131 1_555 D N MSE 46 D MSE 132 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale24 D C MSE 46 D MSE 132 1_555 D N SER 47 D SER 133 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 221 n n C1 C2 PGE sing 222 n n C1 H1 PGE sing 223 n n C1 H12 PGE sing 224 n n O1 HO1 PGE sing 225 n n C2 O2 PGE sing 226 n n C2 H2 PGE sing 227 n n C2 H22 PGE sing 228 n n O2 C3 PGE sing 229 n n C3 C4 PGE sing 230 n n C3 H3 PGE sing 231 n n C3 H32 PGE sing 232 n n C4 O3 PGE sing 233 n n C4 H4 PGE sing 234 n n C4 H42 PGE sing 235 n n O4 C6 PGE sing 236 n n O4 HO4 PGE sing 237 n n C6 C5 PGE sing 238 n n C6 H6 PGE sing 239 n n C6 H62 PGE sing 240 n n C5 O3 PGE sing 241 n n C5 H5 PGE sing 242 n n C5 H52 PGE sing 243 n n # _atom_sites.entry_id 3LUQ _atom_sites.fract_transf_matrix[1][1] 0.015988 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.006803 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013894 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01613 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 1 1 SO4 SO4 . F 2 SO4 A 1 3 3 SO4 SO4 . G 3 PGE A 1 201 3 PGE PGE . H 2 SO4 B 1 2 2 SO4 SO4 . I 3 PGE B 1 201 2 PGE PGE . J 3 PGE B 1 5 5 PGE PGE . K 3 PGE C 1 1 1 PGE PGE . L 3 PGE C 1 4 4 PGE PGE . M 4 HOH A 1 2 2 HOH HOH . M 4 HOH A 2 202 1 HOH HOH . N 4 HOH B 1 3 3 HOH HOH . N 4 HOH B 2 6 6 HOH HOH . N 4 HOH B 3 7 7 HOH HOH . N 4 HOH B 4 8 8 HOH HOH . N 4 HOH B 5 13 13 HOH HOH . N 4 HOH B 6 14 14 HOH HOH . N 4 HOH B 7 15 15 HOH HOH . N 4 HOH B 8 18 18 HOH HOH . O 4 HOH C 1 5 5 HOH HOH . O 4 HOH C 2 9 9 HOH HOH . O 4 HOH C 3 16 16 HOH HOH . P 4 HOH D 1 4 4 HOH HOH . P 4 HOH D 2 10 10 HOH HOH . P 4 HOH D 3 11 11 HOH HOH . P 4 HOH D 4 12 12 HOH HOH . P 4 HOH D 5 17 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . G 3 -7.998 -27.235 0.147 1 80.43 ? C1 PGE 201 A 1 HETATM 2 O O1 PGE . . . G 3 -7.008 -27.042 1.144 1 80.06 ? O1 PGE 201 A 1 HETATM 3 C C2 PGE . . . G 3 -9.134 -28.058 0.702 1 80.6 ? C2 PGE 201 A 1 HETATM 4 O O2 PGE . . . G 3 -9.317 -29.139 -0.172 1 81.72 ? O2 PGE 201 A 1 HETATM 5 C C3 PGE . . . G 3 -10.322 -30.027 0.258 1 83.25 ? C3 PGE 201 A 1 HETATM 6 C C4 PGE . . . G 3 -9.722 -31.335 0.742 1 84.14 ? C4 PGE 201 A 1 HETATM 7 O O4 PGE . . . G 3 -6.724 -33.527 0.183 1 86.15 ? O4 PGE 201 A 1 HETATM 8 C C6 PGE . . . G 3 -6.308 -32.462 1.041 1 86.66 ? C6 PGE 201 A 1 HETATM 9 C C5 PGE . . . G 3 -7.439 -31.478 1.322 1 86.19 ? C5 PGE 201 A 1 HETATM 10 O O3 PGE . . . G 3 -8.396 -31.452 0.269 1 86.32 ? O3 PGE 201 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #