data_3LZD # _model_server_result.job_id bjQToUgx22AArQF6NL-ThQ _model_server_result.datetime_utc '2024-11-30 05:05:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lzd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":344}' # _entry.id 3LZD # _exptl.entry_id 3LZD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LZD _cell.length_a 55.695 _cell.length_b 80.525 _cell.length_c 162.142 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LZD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 F N N ? 3 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 95 A CYS 59 1_555 C FE4 SF4 . A SF4 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc2 A SG CYS 199 A CYS 163 1_555 C FE3 SF4 . A SF4 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.35 ? metalc ? metalc3 A SG CYS 323 A CYS 287 1_555 C FE1 SF4 . A SF4 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.333 ? metalc ? metalc4 B SG CYS 95 B CYS 59 1_555 E FE4 SF4 . B SF4 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.345 ? metalc ? metalc5 B SG CYS 199 B CYS 163 1_555 E FE3 SF4 . B SF4 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc6 B SG CYS 323 B CYS 287 1_555 E FE1 SF4 . B SF4 343 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 302 n n S O2 SO4 doub 303 n n S O3 SO4 sing 304 n n S O4 SO4 sing 305 n n # _atom_sites.entry_id 3LZD _atom_sites.fract_transf_matrix[1][1] 0.017955 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012419 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006167 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SF4 A 1 343 1 SF4 SF4 . D 3 SO4 A 1 344 1 SO4 SO4 . E 2 SF4 B 1 343 2 SF4 SF4 . F 3 SO4 B 1 344 2 SO4 SO4 . G 3 SO4 B 1 345 3 SO4 SO4 . H 4 HOH A 1 345 2 HOH HOH . H 4 HOH A 2 346 3 HOH HOH . H 4 HOH A 3 347 5 HOH HOH . H 4 HOH A 4 348 7 HOH HOH . H 4 HOH A 5 349 8 HOH HOH . H 4 HOH A 6 350 9 HOH HOH . H 4 HOH A 7 351 10 HOH HOH . H 4 HOH A 8 352 13 HOH HOH . H 4 HOH A 9 353 14 HOH HOH . H 4 HOH A 10 354 18 HOH HOH . H 4 HOH A 11 355 19 HOH HOH . H 4 HOH A 12 356 21 HOH HOH . H 4 HOH A 13 357 23 HOH HOH . H 4 HOH A 14 358 24 HOH HOH . H 4 HOH A 15 359 26 HOH HOH . H 4 HOH A 16 360 27 HOH HOH . H 4 HOH A 17 361 30 HOH HOH . H 4 HOH A 18 362 31 HOH HOH . H 4 HOH A 19 363 35 HOH HOH . H 4 HOH A 20 364 39 HOH HOH . H 4 HOH A 21 365 40 HOH HOH . H 4 HOH A 22 366 42 HOH HOH . H 4 HOH A 23 367 44 HOH HOH . H 4 HOH A 24 368 45 HOH HOH . H 4 HOH A 25 369 46 HOH HOH . H 4 HOH A 26 370 47 HOH HOH . H 4 HOH A 27 371 48 HOH HOH . H 4 HOH A 28 372 50 HOH HOH . H 4 HOH A 29 373 51 HOH HOH . H 4 HOH A 30 374 53 HOH HOH . H 4 HOH A 31 375 56 HOH HOH . H 4 HOH A 32 376 57 HOH HOH . H 4 HOH A 33 377 60 HOH HOH . H 4 HOH A 34 378 61 HOH HOH . H 4 HOH A 35 379 62 HOH HOH . H 4 HOH A 36 380 63 HOH HOH . H 4 HOH A 37 381 65 HOH HOH . H 4 HOH A 38 382 66 HOH HOH . H 4 HOH A 39 383 67 HOH HOH . H 4 HOH A 40 384 74 HOH HOH . H 4 HOH A 41 385 76 HOH HOH . H 4 HOH A 42 386 77 HOH HOH . H 4 HOH A 43 387 80 HOH HOH . H 4 HOH A 44 388 81 HOH HOH . H 4 HOH A 45 389 84 HOH HOH . H 4 HOH A 46 390 91 HOH HOH . H 4 HOH A 47 391 98 HOH HOH . H 4 HOH A 48 392 99 HOH HOH . H 4 HOH A 49 393 102 HOH HOH . H 4 HOH A 50 394 104 HOH HOH . H 4 HOH A 51 395 105 HOH HOH . H 4 HOH A 52 396 117 HOH HOH . H 4 HOH A 53 397 118 HOH HOH . H 4 HOH A 54 398 119 HOH HOH . H 4 HOH A 55 399 120 HOH HOH . H 4 HOH A 56 400 121 HOH HOH . H 4 HOH A 57 401 122 HOH HOH . H 4 HOH A 58 402 123 HOH HOH . H 4 HOH A 59 403 124 HOH HOH . H 4 HOH A 60 404 125 HOH HOH . H 4 HOH A 61 405 126 HOH HOH . H 4 HOH A 62 406 127 HOH HOH . H 4 HOH A 63 407 128 HOH HOH . H 4 HOH A 64 408 131 HOH HOH . H 4 HOH A 65 409 132 HOH HOH . H 4 HOH A 66 410 137 HOH HOH . H 4 HOH A 67 411 138 HOH HOH . H 4 HOH A 68 412 139 HOH HOH . H 4 HOH A 69 413 140 HOH HOH . H 4 HOH A 70 414 141 HOH HOH . H 4 HOH A 71 415 142 HOH HOH . H 4 HOH A 72 416 143 HOH HOH . H 4 HOH A 73 417 144 HOH HOH . H 4 HOH A 74 418 145 HOH HOH . H 4 HOH A 75 419 146 HOH HOH . H 4 HOH A 76 420 147 HOH HOH . H 4 HOH A 77 421 148 HOH HOH . H 4 HOH A 78 422 149 HOH HOH . H 4 HOH A 79 423 150 HOH HOH . H 4 HOH A 80 424 151 HOH HOH . H 4 HOH A 81 425 152 HOH HOH . H 4 HOH A 82 426 153 HOH HOH . H 4 HOH A 83 427 154 HOH HOH . H 4 HOH A 84 428 155 HOH HOH . H 4 HOH A 85 429 156 HOH HOH . H 4 HOH A 86 430 157 HOH HOH . H 4 HOH A 87 431 158 HOH HOH . H 4 HOH A 88 432 159 HOH HOH . H 4 HOH A 89 433 160 HOH HOH . H 4 HOH A 90 434 161 HOH HOH . H 4 HOH A 91 435 162 HOH HOH . H 4 HOH A 92 436 163 HOH HOH . H 4 HOH A 93 437 164 HOH HOH . H 4 HOH A 94 438 165 HOH HOH . H 4 HOH A 95 439 166 HOH HOH . H 4 HOH A 96 440 167 HOH HOH . H 4 HOH A 97 441 168 HOH HOH . H 4 HOH A 98 442 169 HOH HOH . H 4 HOH A 99 443 170 HOH HOH . H 4 HOH A 100 444 171 HOH HOH . H 4 HOH A 101 445 172 HOH HOH . H 4 HOH A 102 446 173 HOH HOH . H 4 HOH A 103 447 174 HOH HOH . H 4 HOH A 104 448 175 HOH HOH . H 4 HOH A 105 449 177 HOH HOH . H 4 HOH A 106 450 178 HOH HOH . H 4 HOH A 107 451 179 HOH HOH . H 4 HOH A 108 452 180 HOH HOH . H 4 HOH A 109 453 181 HOH HOH . H 4 HOH A 110 454 182 HOH HOH . H 4 HOH A 111 455 183 HOH HOH . H 4 HOH A 112 456 189 HOH HOH . H 4 HOH A 113 457 200 HOH HOH . H 4 HOH A 114 458 207 HOH HOH . H 4 HOH A 115 459 208 HOH HOH . H 4 HOH A 116 460 209 HOH HOH . H 4 HOH A 117 461 210 HOH HOH . H 4 HOH A 118 462 213 HOH HOH . H 4 HOH A 119 463 214 HOH HOH . H 4 HOH A 120 464 217 HOH HOH . H 4 HOH A 121 465 220 HOH HOH . H 4 HOH A 122 466 221 HOH HOH . H 4 HOH A 123 467 227 HOH HOH . H 4 HOH A 124 468 228 HOH HOH . H 4 HOH A 125 469 229 HOH HOH . H 4 HOH A 126 470 232 HOH HOH . H 4 HOH A 127 471 237 HOH HOH . H 4 HOH A 128 472 245 HOH HOH . H 4 HOH A 129 473 246 HOH HOH . H 4 HOH A 130 474 249 HOH HOH . H 4 HOH A 131 475 251 HOH HOH . H 4 HOH A 132 476 254 HOH HOH . H 4 HOH A 133 477 257 HOH HOH . H 4 HOH A 134 478 258 HOH HOH . H 4 HOH A 135 479 259 HOH HOH . I 4 HOH B 1 346 1 HOH HOH . I 4 HOH B 2 347 4 HOH HOH . I 4 HOH B 3 348 6 HOH HOH . I 4 HOH B 4 349 11 HOH HOH . I 4 HOH B 5 350 12 HOH HOH . I 4 HOH B 6 351 15 HOH HOH . I 4 HOH B 7 352 16 HOH HOH . I 4 HOH B 8 353 17 HOH HOH . I 4 HOH B 9 354 20 HOH HOH . I 4 HOH B 10 355 22 HOH HOH . I 4 HOH B 11 356 25 HOH HOH . I 4 HOH B 12 357 28 HOH HOH . I 4 HOH B 13 358 29 HOH HOH . I 4 HOH B 14 359 32 HOH HOH . I 4 HOH B 15 360 33 HOH HOH . I 4 HOH B 16 361 34 HOH HOH . I 4 HOH B 17 362 36 HOH HOH . I 4 HOH B 18 363 37 HOH HOH . I 4 HOH B 19 364 38 HOH HOH . I 4 HOH B 20 365 41 HOH HOH . I 4 HOH B 21 366 43 HOH HOH . I 4 HOH B 22 367 49 HOH HOH . I 4 HOH B 23 368 52 HOH HOH . I 4 HOH B 24 369 54 HOH HOH . I 4 HOH B 25 370 55 HOH HOH . I 4 HOH B 26 371 58 HOH HOH . I 4 HOH B 27 372 59 HOH HOH . I 4 HOH B 28 373 64 HOH HOH . I 4 HOH B 29 374 68 HOH HOH . I 4 HOH B 30 375 69 HOH HOH . I 4 HOH B 31 376 70 HOH HOH . I 4 HOH B 32 377 71 HOH HOH . I 4 HOH B 33 378 72 HOH HOH . I 4 HOH B 34 379 73 HOH HOH . I 4 HOH B 35 380 75 HOH HOH . I 4 HOH B 36 381 78 HOH HOH . I 4 HOH B 37 382 79 HOH HOH . I 4 HOH B 38 383 82 HOH HOH . I 4 HOH B 39 384 83 HOH HOH . I 4 HOH B 40 385 85 HOH HOH . I 4 HOH B 41 386 86 HOH HOH . I 4 HOH B 42 387 87 HOH HOH . I 4 HOH B 43 388 88 HOH HOH . I 4 HOH B 44 389 89 HOH HOH . I 4 HOH B 45 390 90 HOH HOH . I 4 HOH B 46 391 92 HOH HOH . I 4 HOH B 47 392 93 HOH HOH . I 4 HOH B 48 393 94 HOH HOH . I 4 HOH B 49 394 95 HOH HOH . I 4 HOH B 50 395 96 HOH HOH . I 4 HOH B 51 396 97 HOH HOH . I 4 HOH B 52 397 100 HOH HOH . I 4 HOH B 53 398 101 HOH HOH . I 4 HOH B 54 399 103 HOH HOH . I 4 HOH B 55 400 106 HOH HOH . I 4 HOH B 56 401 107 HOH HOH . I 4 HOH B 57 402 108 HOH HOH . I 4 HOH B 58 403 109 HOH HOH . I 4 HOH B 59 404 110 HOH HOH . I 4 HOH B 60 405 111 HOH HOH . I 4 HOH B 61 406 112 HOH HOH . I 4 HOH B 62 407 113 HOH HOH . I 4 HOH B 63 408 114 HOH HOH . I 4 HOH B 64 409 115 HOH HOH . I 4 HOH B 65 410 116 HOH HOH . I 4 HOH B 66 411 129 HOH HOH . I 4 HOH B 67 412 130 HOH HOH . I 4 HOH B 68 413 133 HOH HOH . I 4 HOH B 69 414 134 HOH HOH . I 4 HOH B 70 415 135 HOH HOH . I 4 HOH B 71 416 136 HOH HOH . I 4 HOH B 72 417 176 HOH HOH . I 4 HOH B 73 418 184 HOH HOH . I 4 HOH B 74 419 185 HOH HOH . I 4 HOH B 75 420 186 HOH HOH . I 4 HOH B 76 421 187 HOH HOH . I 4 HOH B 77 422 188 HOH HOH . I 4 HOH B 78 423 190 HOH HOH . I 4 HOH B 79 424 191 HOH HOH . I 4 HOH B 80 425 192 HOH HOH . I 4 HOH B 81 426 193 HOH HOH . I 4 HOH B 82 427 194 HOH HOH . I 4 HOH B 83 428 195 HOH HOH . I 4 HOH B 84 429 196 HOH HOH . I 4 HOH B 85 430 197 HOH HOH . I 4 HOH B 86 431 198 HOH HOH . I 4 HOH B 87 432 199 HOH HOH . I 4 HOH B 88 433 201 HOH HOH . I 4 HOH B 89 434 202 HOH HOH . I 4 HOH B 90 435 203 HOH HOH . I 4 HOH B 91 436 204 HOH HOH . I 4 HOH B 92 437 205 HOH HOH . I 4 HOH B 93 438 206 HOH HOH . I 4 HOH B 94 439 211 HOH HOH . I 4 HOH B 95 440 212 HOH HOH . I 4 HOH B 96 441 216 HOH HOH . I 4 HOH B 97 442 218 HOH HOH . I 4 HOH B 98 443 219 HOH HOH . I 4 HOH B 99 444 222 HOH HOH . I 4 HOH B 100 445 223 HOH HOH . I 4 HOH B 101 446 224 HOH HOH . I 4 HOH B 102 447 225 HOH HOH . I 4 HOH B 103 448 226 HOH HOH . I 4 HOH B 104 449 230 HOH HOH . I 4 HOH B 105 450 231 HOH HOH . I 4 HOH B 106 451 233 HOH HOH . I 4 HOH B 107 452 234 HOH HOH . I 4 HOH B 108 453 235 HOH HOH . I 4 HOH B 109 454 236 HOH HOH . I 4 HOH B 110 455 238 HOH HOH . I 4 HOH B 111 456 239 HOH HOH . I 4 HOH B 112 457 240 HOH HOH . I 4 HOH B 113 458 241 HOH HOH . I 4 HOH B 114 459 242 HOH HOH . I 4 HOH B 115 460 243 HOH HOH . I 4 HOH B 116 461 244 HOH HOH . I 4 HOH B 117 462 247 HOH HOH . I 4 HOH B 118 463 248 HOH HOH . I 4 HOH B 119 464 250 HOH HOH . I 4 HOH B 120 465 252 HOH HOH . I 4 HOH B 121 466 253 HOH HOH . I 4 HOH B 122 467 255 HOH HOH . I 4 HOH B 123 468 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . D 3 26.984 29.146 27.604 1 86.72 ? S SO4 344 A 1 HETATM 2 O O1 SO4 . . . D 3 25.844 28.695 26.782 1 88.84 ? O1 SO4 344 A 1 HETATM 3 O O2 SO4 . . . D 3 27.154 28.254 28.769 1 83.93 ? O2 SO4 344 A 1 HETATM 4 O O3 SO4 . . . D 3 28.207 29.141 26.779 1 89 ? O3 SO4 344 A 1 HETATM 5 O O4 SO4 . . . D 3 26.723 30.512 28.088 1 88.18 ? O4 SO4 344 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #