data_3LZS # _model_server_result.job_id 4pyNguPc-TUJY6dCGeejhw _model_server_result.datetime_utc '2024-11-04 23:04:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lzs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 3LZS # _exptl.entry_id 3LZS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 547.664 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3LZS _cell.length_a 62.164 _cell.length_b 62.164 _cell.length_c 82.705 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LZS _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C27 H37 N3 O7 S' _chem_comp.formula_weight 547.664 _chem_comp.id 017 _chem_comp.mon_nstd_flag . _chem_comp.name (3R,3AS,6AR)-HEXAHYDROFURO[2,3-B]FURAN-3-YL(1S,2R)-3-[[(4-AMINOPHENYL)SULFONYL](ISOBUTYL)AMINO]-1-BENZYL-2-HYDROXYPROPYLCARBAMATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Darunavir;TMC114;UIC-94017 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 017 sing 1 n n N1 H11 017 sing 2 n n N1 H12 017 sing 3 n n C2 C3 017 doub 4 n y C2 C7 017 sing 5 n y C3 C4 017 sing 6 n y C3 H3 017 sing 7 n n C4 C5 017 doub 8 n y C4 H4 017 sing 9 n n C5 C6 017 sing 10 n y C5 S8 017 sing 11 n n C6 C7 017 doub 12 n y C6 H6 017 sing 13 n n C7 H7 017 sing 14 n n S8 O9 017 doub 15 n n S8 O10 017 doub 16 n n S8 N11 017 sing 17 n n N11 C12 017 sing 18 n n N11 C16 017 sing 19 n n C12 C13 017 sing 20 n n C12 H121 017 sing 21 n n C12 H122 017 sing 22 n n C13 C14 017 sing 23 n n C13 C15 017 sing 24 n n C13 H13 017 sing 25 n n C14 H141 017 sing 26 n n C14 H142 017 sing 27 n n C14 H143 017 sing 28 n n C15 H151 017 sing 29 n n C15 H152 017 sing 30 n n C15 H153 017 sing 31 n n C16 C17 017 sing 32 n n C16 H161 017 sing 33 n n C16 H162 017 sing 34 n n C17 O18 017 sing 35 n n C17 C19 017 sing 36 n n C17 H17 017 sing 37 n n O18 H18 017 sing 38 n n C19 N20 017 sing 39 n n C19 C32 017 sing 40 n n C19 H19 017 sing 41 n n N20 C21 017 sing 42 n n N20 H20 017 sing 43 n n C21 O22 017 doub 44 n n C21 O23 017 sing 45 n n O23 C24 017 sing 46 n n C24 C25 017 sing 47 n n C24 C31 017 sing 48 n n C24 H24 017 sing 49 n n C25 O26 017 sing 50 n n C25 H251 017 sing 51 n n C25 H252 017 sing 52 n n O26 C27 017 sing 53 n n C27 O28 017 sing 54 n n C27 C31 017 sing 55 n n C27 H27 017 sing 56 n n O28 C29 017 sing 57 n n C29 C30 017 sing 58 n n C29 H291 017 sing 59 n n C29 H292 017 sing 60 n n C30 C31 017 sing 61 n n C30 H301 017 sing 62 n n C30 H302 017 sing 63 n n C31 H31 017 sing 64 n n C32 C38 017 sing 65 n n C32 H321 017 sing 66 n n C32 H322 017 sing 67 n n C33 C34 017 doub 68 n y C33 C38 017 sing 69 n y C33 H33 017 sing 70 n n C34 C35 017 sing 71 n y C34 H34 017 sing 72 n n C35 C36 017 doub 73 n y C35 H35 017 sing 74 n n C36 C37 017 sing 75 n y C36 H36 017 sing 76 n n C37 C38 017 doub 77 n y C37 H37 017 sing 78 n n # _atom_sites.entry_id 3LZS _atom_sites.fract_transf_matrix[1][1] 0.016086 _atom_sites.fract_transf_matrix[1][2] 0.009288 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018575 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012091 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 017 A 1 200 200 017 017 . D 3 ACT A 1 100 1 ACT ACT . E 3 ACT A 1 101 1 ACT ACT . F 3 ACT B 1 100 1 ACT ACT . G 4 HOH A 1 102 2 HOH HOH . G 4 HOH A 2 103 3 HOH HOH . G 4 HOH A 3 104 5 HOH HOH . G 4 HOH A 4 105 6 HOH HOH . G 4 HOH A 5 106 12 HOH HOH . G 4 HOH A 6 107 13 HOH HOH . G 4 HOH A 7 108 15 HOH HOH . G 4 HOH A 8 109 19 HOH HOH . G 4 HOH A 9 110 23 HOH HOH . G 4 HOH A 10 111 24 HOH HOH . G 4 HOH A 11 112 25 HOH HOH . G 4 HOH A 12 113 29 HOH HOH . G 4 HOH A 13 114 32 HOH HOH . G 4 HOH A 14 115 33 HOH HOH . G 4 HOH A 15 116 36 HOH HOH . G 4 HOH A 16 117 38 HOH HOH . G 4 HOH A 17 118 43 HOH HOH . G 4 HOH A 18 119 50 HOH HOH . G 4 HOH A 19 120 51 HOH HOH . G 4 HOH A 20 121 55 HOH HOH . G 4 HOH A 21 122 56 HOH HOH . G 4 HOH A 22 123 58 HOH HOH . G 4 HOH A 23 124 59 HOH HOH . G 4 HOH A 24 125 60 HOH HOH . G 4 HOH A 25 126 62 HOH HOH . G 4 HOH A 26 127 63 HOH HOH . G 4 HOH A 27 128 65 HOH HOH . G 4 HOH A 28 129 66 HOH HOH . G 4 HOH A 29 130 67 HOH HOH . G 4 HOH A 30 131 68 HOH HOH . G 4 HOH A 31 132 69 HOH HOH . G 4 HOH A 32 133 70 HOH HOH . G 4 HOH A 33 134 71 HOH HOH . G 4 HOH A 34 135 72 HOH HOH . G 4 HOH A 35 137 76 HOH HOH . H 4 HOH B 1 101 1 HOH HOH . H 4 HOH B 2 102 4 HOH HOH . H 4 HOH B 3 103 7 HOH HOH . H 4 HOH B 4 104 8 HOH HOH . H 4 HOH B 5 105 9 HOH HOH . H 4 HOH B 6 106 10 HOH HOH . H 4 HOH B 7 107 11 HOH HOH . H 4 HOH B 8 108 14 HOH HOH . H 4 HOH B 9 109 16 HOH HOH . H 4 HOH B 10 110 17 HOH HOH . H 4 HOH B 11 111 18 HOH HOH . H 4 HOH B 12 112 20 HOH HOH . H 4 HOH B 13 113 26 HOH HOH . H 4 HOH B 14 114 27 HOH HOH . H 4 HOH B 15 115 28 HOH HOH . H 4 HOH B 16 116 31 HOH HOH . H 4 HOH B 17 117 34 HOH HOH . H 4 HOH B 18 118 37 HOH HOH . H 4 HOH B 19 119 40 HOH HOH . H 4 HOH B 20 120 42 HOH HOH . H 4 HOH B 21 121 44 HOH HOH . H 4 HOH B 22 122 46 HOH HOH . H 4 HOH B 23 123 48 HOH HOH . H 4 HOH B 24 124 49 HOH HOH . H 4 HOH B 25 125 54 HOH HOH . H 4 HOH B 26 126 57 HOH HOH . H 4 HOH B 27 127 61 HOH HOH . H 4 HOH B 28 128 64 HOH HOH . H 4 HOH B 29 129 74 HOH HOH . H 4 HOH B 30 130 75 HOH HOH . H 4 HOH B 31 131 79 HOH HOH . H 4 HOH B 32 136 73 HOH HOH . H 4 HOH B 33 138 77 HOH HOH . H 4 HOH B 34 139 78 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 017 . A . C 2 -8.129 16.351 -8.113 0.5 32.12 ? N1 017 200 A 1 HETATM 2 N N1 017 . B . C 2 -10.175 15.331 8.011 0.5 27.6 ? N1 017 200 A 1 HETATM 3 C C2 017 . A . C 2 -8.268 16.101 -6.788 0.5 28.94 ? C2 017 200 A 1 HETATM 4 C C2 017 . B . C 2 -9.864 15.305 6.696 0.5 24.4 ? C2 017 200 A 1 HETATM 5 C C3 017 . A . C 2 -7.14 15.818 -6.034 0.5 28.91 ? C3 017 200 A 1 HETATM 6 C C3 017 . B . C 2 -9.279 16.405 6.079 0.5 23.83 ? C3 017 200 A 1 HETATM 7 C C4 017 . A . C 2 -7.261 15.548 -4.677 0.5 27.02 ? C4 017 200 A 1 HETATM 8 C C4 017 . B . C 2 -8.957 16.345 4.725 0.5 21.88 ? C4 017 200 A 1 HETATM 9 C C5 017 . A . C 2 -8.511 15.583 -4.074 0.5 25.91 ? C5 017 200 A 1 HETATM 10 C C5 017 . B . C 2 -9.247 15.191 4.006 0.5 22.72 ? C5 017 200 A 1 HETATM 11 C C6 017 . A . C 2 -9.65 15.858 -4.83 0.5 26.22 ? C6 017 200 A 1 HETATM 12 C C6 017 . B . C 2 -9.83 14.096 4.628 0.5 22.38 ? C6 017 200 A 1 HETATM 13 C C7 017 . A . C 2 -9.525 16.125 -6.191 0.5 27.26 ? C7 017 200 A 1 HETATM 14 C C7 017 . B . C 2 -10.148 14.157 5.974 0.5 24.83 ? C7 017 200 A 1 HETATM 15 S S8 017 . A . C 2 -8.611 15.271 -2.51 0.5 24.05 ? S8 017 200 A 1 HETATM 16 S S8 017 . B . C 2 -8.914 15.06 2.452 0.5 22.33 ? S8 017 200 A 1 HETATM 17 O O9 017 . A . C 2 -9.904 14.712 -2.232 0.5 23.69 ? O9 017 200 A 1 HETATM 18 O O9 017 . B . C 2 -7.732 15.815 2.12 0.5 21.78 ? O9 017 200 A 1 HETATM 19 O O10 017 . A . C 2 -7.539 14.382 -2.181 0.5 23.22 ? O10 017 200 A 1 HETATM 20 O O10 017 . B . C 2 -8.695 13.669 2.178 0.5 21.47 ? O10 017 200 A 1 HETATM 21 N N11 017 . A . C 2 -8.439 16.567 -1.571 0.5 23.75 ? N11 017 200 A 1 HETATM 22 N N11 017 . B . C 2 -10.145 15.555 1.543 0.5 21.73 ? N11 017 200 A 1 HETATM 23 C C12 017 . A . C 2 -7.24 17.372 -1.869 0.5 22.47 ? C12 017 200 A 1 HETATM 24 C C12 017 . B . C 2 -11.434 15.024 2.017 0.5 21.52 ? C12 017 200 A 1 HETATM 25 C C13 017 . A . C 2 -6.733 18.057 -0.597 0.5 22.94 ? C13 017 200 A 1 HETATM 26 C C13 017 . B . C 2 -12.392 14.879 0.836 0.5 21.69 ? C13 017 200 A 1 HETATM 27 C C14 017 . A . C 2 -6.074 17.08 0.371 0.5 22.47 ? C14 017 200 A 1 HETATM 28 C C14 017 . B . C 2 -11.796 14.026 -0.275 0.5 21.14 ? C14 017 200 A 1 HETATM 29 C C15 017 . A . C 2 -5.73 19.168 -0.905 0.5 23.63 ? C15 017 200 A 1 HETATM 30 C C15 017 . B . C 2 -13.744 14.306 1.269 0.5 22.43 ? C15 017 200 A 1 HETATM 31 C C16 017 . A . C 2 -9.69 17.338 -1.552 0.5 21.81 ? C16 017 200 A 1 HETATM 32 C C16 017 . B . C 2 -10.126 17.023 1.47 0.5 20.85 ? C16 017 200 A 1 HETATM 33 C C17 017 . A . C 2 -10.137 17.42 -0.101 0.5 20.04 ? C17 017 200 A 1 HETATM 34 C C17 017 . B . C 2 -9.967 17.425 0.011 0.5 20 ? C17 017 200 A 1 HETATM 35 O O18 017 . A . C 2 -11.211 18.357 0.017 0.5 19.79 ? O18 017 200 A 1 HETATM 36 O O18 017 . B . C 2 -10.306 18.807 -0.095 0.5 21.44 ? O18 017 200 A 1 HETATM 37 C C19 017 . A . C 2 -10.546 16.049 0.436 0.5 20.81 ? C19 017 200 A 1 HETATM 38 C C19 017 . B . C 2 -8.563 17.146 -0.531 0.5 21.12 ? C19 017 200 A 1 HETATM 39 N N20 017 . A . C 2 -10.674 16.16 1.875 0.5 18.58 ? N20 017 200 A 1 HETATM 40 N N20 017 . B . C 2 -8.571 17.338 -1.97 0.5 18.88 ? N20 017 200 A 1 HETATM 41 C C21 017 . A . C 2 -9.94 15.496 2.753 0.5 16.11 ? C21 017 200 A 1 HETATM 42 C C21 017 . B . C 2 -8.397 16.352 -2.83 0.5 17.64 ? C21 017 200 A 1 HETATM 43 O O22 017 . A . C 2 -9.053 14.704 2.469 0.5 16.1 ? O22 017 200 A 1 HETATM 44 O O22 017 . B . C 2 -8.212 15.178 -2.523 0.5 15.94 ? O22 017 200 A 1 HETATM 45 O O23 017 . A . C 2 -10.323 15.745 4.133 0.5 18.48 ? O23 017 200 A 1 HETATM 46 O O23 017 . B . C 2 -8.428 16.803 -4.21 0.5 19.16 ? O23 017 200 A 1 HETATM 47 C C24 017 . A . C 2 -9.638 14.989 5.121 0.5 17 ? C24 017 200 A 1 HETATM 48 C C24 017 . B . C 2 -8.074 15.812 -5.168 0.5 19.54 ? C24 017 200 A 1 HETATM 49 C C25 017 . A . C 2 -9.242 15.987 6.189 0.5 18.01 ? C25 017 200 A 1 HETATM 50 C C25 017 . B . C 2 -9.083 15.919 -6.294 0.5 18.83 ? C25 017 200 A 1 HETATM 51 O O26 017 . A . C 2 -10.479 16.238 6.846 0.5 17.26 ? O26 017 200 A 1 HETATM 52 O O26 017 . B . C 2 -8.674 17.112 -6.965 0.5 20.18 ? O26 017 200 A 1 HETATM 53 C C27 017 . A . C 2 -11.296 15.053 6.802 0.5 17.8 ? C27 017 200 A 1 HETATM 54 C C27 017 . B . C 2 -7.249 17.288 -6.825 0.5 19.15 ? C27 017 200 A 1 HETATM 55 O O28 017 . A . C 2 -12.624 15.276 6.291 0.5 17.45 ? O28 017 200 A 1 HETATM 56 O O28 017 . B . C 2 -6.867 18.577 -6.308 0.5 19.85 ? O28 017 200 A 1 HETATM 57 C C29 017 . A . C 2 -12.925 14.43 5.186 0.5 17.88 ? C29 017 200 A 1 HETATM 58 C C29 017 . B . C 2 -5.97 18.461 -5.206 0.5 18.84 ? C29 017 200 A 1 HETATM 59 C C30 017 . A . C 2 -11.737 13.498 5 0.5 18.86 ? C30 017 200 A 1 HETATM 60 C C30 017 . B . C 2 -5.793 16.978 -4.913 0.5 20.14 ? C30 017 200 A 1 HETATM 61 C C31 017 . A . C 2 -10.624 14.093 5.843 0.5 18.55 ? C31 017 200 A 1 HETATM 62 C C31 017 . B . C 2 -6.781 16.262 -5.819 0.5 20.6 ? C31 017 200 A 1 HETATM 63 C C32 017 . A . C 2 -11.859 15.547 -0.165 0.5 21.32 ? C32 017 200 A 1 HETATM 64 C C32 017 . B . C 2 -7.45 18.021 0.045 0.5 21.56 ? C32 017 200 A 1 HETATM 65 C C33 017 . A . C 2 -13.416 14.178 1.266 0.5 24.78 ? C33 017 200 A 1 HETATM 66 C C33 017 . B . C 2 -5.608 18.654 -1.563 0.5 26.99 ? C33 017 200 A 1 HETATM 67 C C34 017 . A . C 2 -13.818 12.981 1.852 0.5 24.45 ? C34 017 200 A 1 HETATM 68 C C34 017 . B . C 2 -4.417 18.395 -2.237 0.5 28.07 ? C34 017 200 A 1 HETATM 69 C C35 017 . A . C 2 -13.083 11.822 1.635 0.5 24.58 ? C35 017 200 A 1 HETATM 70 C C35 017 . B . C 2 -3.736 17.201 -2.023 0.5 26.98 ? C35 017 200 A 1 HETATM 71 C C36 017 . A . C 2 -11.953 11.874 0.818 0.5 25.72 ? C36 017 200 A 1 HETATM 72 C C36 017 . B . C 2 -4.263 16.277 -1.124 0.5 27.65 ? C36 017 200 A 1 HETATM 73 C C37 017 . A . C 2 -11.553 13.07 0.232 0.5 24.2 ? C37 017 200 A 1 HETATM 74 C C37 017 . B . C 2 -5.455 16.537 -0.449 0.5 26.17 ? C37 017 200 A 1 HETATM 75 C C38 017 . A . C 2 -12.279 14.233 0.461 0.5 22.77 ? C38 017 200 A 1 HETATM 76 C C38 017 . B . C 2 -6.141 17.728 -0.668 0.5 25.13 ? C38 017 200 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 76 #