data_3LZW # _model_server_result.job_id lr1aCGISyffeIjz3c5x1JA _model_server_result.datetime_utc '2024-11-09 01:29:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3lzw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3001}' # _entry.id 3LZW # _exptl.entry_id 3LZW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3LZW _cell.length_a 63.9 _cell.length_b 135.724 _cell.length_c 39.191 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3LZW _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 266 A SER 266 1_555 D NA NA . A NA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc2 A O ASP 285 A ASP 285 1_555 D NA NA . A NA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc3 F O HOH . A HOH 336 1_555 D NA NA . A NA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.436 ? metalc ? metalc4 F O HOH . A HOH 356 1_555 D NA NA . A NA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? metalc ? metalc5 F O HOH . A HOH 374 1_555 D NA NA . A NA 3001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc6 F O HOH . A HOH 379 1_555 E NA NA . A NA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? metalc ? metalc7 F O HOH . A HOH 396 1_555 E NA NA . A NA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.408 ? metalc ? metalc8 F O HOH . A HOH 486 1_555 E NA NA . A NA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc9 F O HOH . A HOH 518 1_555 E NA NA . A NA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc10 C O3D NAP . A NAP 2000 1_555 E NA NA . A NA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.389 ? metalc ? metalc11 C O2D NAP . A NAP 2000 1_555 E NA NA . A NA 3002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3LZW _atom_sites.fract_transf_matrix[1][1] 0.015649 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007368 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025516 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 1000 1000 FAD FAD . C 3 NAP A 1 2000 2000 NAP NAP . D 4 NA A 1 3001 3001 NA NA . E 4 NA A 1 3002 3002 NA NA . F 5 HOH A 1 333 333 HOH HOH . F 5 HOH A 2 334 334 HOH HOH . F 5 HOH A 3 335 335 HOH HOH . F 5 HOH A 4 336 336 HOH HOH . F 5 HOH A 5 337 337 HOH HOH . F 5 HOH A 6 338 338 HOH HOH . F 5 HOH A 7 339 339 HOH HOH . F 5 HOH A 8 340 340 HOH HOH . F 5 HOH A 9 341 341 HOH HOH . F 5 HOH A 10 342 342 HOH HOH . F 5 HOH A 11 343 343 HOH HOH . F 5 HOH A 12 344 344 HOH HOH . F 5 HOH A 13 345 345 HOH HOH . F 5 HOH A 14 346 346 HOH HOH . F 5 HOH A 15 347 347 HOH HOH . F 5 HOH A 16 348 348 HOH HOH . F 5 HOH A 17 349 349 HOH HOH . F 5 HOH A 18 350 350 HOH HOH . F 5 HOH A 19 351 351 HOH HOH . F 5 HOH A 20 352 352 HOH HOH . F 5 HOH A 21 353 353 HOH HOH . F 5 HOH A 22 354 354 HOH HOH . F 5 HOH A 23 355 355 HOH HOH . F 5 HOH A 24 356 356 HOH HOH . F 5 HOH A 25 357 357 HOH HOH . F 5 HOH A 26 358 358 HOH HOH . F 5 HOH A 27 359 359 HOH HOH . F 5 HOH A 28 360 360 HOH HOH . F 5 HOH A 29 361 361 HOH HOH . F 5 HOH A 30 362 362 HOH HOH . F 5 HOH A 31 363 363 HOH HOH . F 5 HOH A 32 364 364 HOH HOH . F 5 HOH A 33 365 365 HOH HOH . F 5 HOH A 34 366 366 HOH HOH . F 5 HOH A 35 367 367 HOH HOH . F 5 HOH A 36 368 368 HOH HOH . F 5 HOH A 37 369 369 HOH HOH . F 5 HOH A 38 370 370 HOH HOH . F 5 HOH A 39 371 371 HOH HOH . F 5 HOH A 40 372 372 HOH HOH . F 5 HOH A 41 373 373 HOH HOH . F 5 HOH A 42 374 374 HOH HOH . F 5 HOH A 43 375 375 HOH HOH . F 5 HOH A 44 376 376 HOH HOH . F 5 HOH A 45 377 377 HOH HOH . F 5 HOH A 46 378 378 HOH HOH . F 5 HOH A 47 379 379 HOH HOH . F 5 HOH A 48 380 380 HOH HOH . F 5 HOH A 49 381 381 HOH HOH . F 5 HOH A 50 382 382 HOH HOH . F 5 HOH A 51 383 383 HOH HOH . F 5 HOH A 52 384 384 HOH HOH . F 5 HOH A 53 385 385 HOH HOH . F 5 HOH A 54 386 386 HOH HOH . F 5 HOH A 55 387 387 HOH HOH . F 5 HOH A 56 388 388 HOH HOH . F 5 HOH A 57 389 389 HOH HOH . F 5 HOH A 58 390 390 HOH HOH . F 5 HOH A 59 391 391 HOH HOH . F 5 HOH A 60 392 392 HOH HOH . F 5 HOH A 61 393 393 HOH HOH . F 5 HOH A 62 394 394 HOH HOH . F 5 HOH A 63 395 395 HOH HOH . F 5 HOH A 64 396 396 HOH HOH . F 5 HOH A 65 397 397 HOH HOH . F 5 HOH A 66 398 398 HOH HOH . F 5 HOH A 67 399 399 HOH HOH . F 5 HOH A 68 400 400 HOH HOH . F 5 HOH A 69 401 401 HOH HOH . F 5 HOH A 70 402 402 HOH HOH . F 5 HOH A 71 403 403 HOH HOH . F 5 HOH A 72 404 404 HOH HOH . F 5 HOH A 73 405 405 HOH HOH . F 5 HOH A 74 406 406 HOH HOH . F 5 HOH A 75 407 407 HOH HOH . F 5 HOH A 76 408 408 HOH HOH . F 5 HOH A 77 409 409 HOH HOH . F 5 HOH A 78 410 410 HOH HOH . F 5 HOH A 79 411 411 HOH HOH . F 5 HOH A 80 412 412 HOH HOH . F 5 HOH A 81 413 413 HOH HOH . F 5 HOH A 82 414 414 HOH HOH . F 5 HOH A 83 415 415 HOH HOH . F 5 HOH A 84 416 416 HOH HOH . F 5 HOH A 85 417 417 HOH HOH . F 5 HOH A 86 418 418 HOH HOH . F 5 HOH A 87 419 419 HOH HOH . F 5 HOH A 88 420 420 HOH HOH . F 5 HOH A 89 421 421 HOH HOH . F 5 HOH A 90 422 422 HOH HOH . F 5 HOH A 91 423 423 HOH HOH . F 5 HOH A 92 424 424 HOH HOH . F 5 HOH A 93 425 425 HOH HOH . F 5 HOH A 94 426 426 HOH HOH . F 5 HOH A 95 427 427 HOH HOH . F 5 HOH A 96 428 428 HOH HOH . F 5 HOH A 97 429 429 HOH HOH . F 5 HOH A 98 430 430 HOH HOH . F 5 HOH A 99 431 431 HOH HOH . F 5 HOH A 100 432 432 HOH HOH . F 5 HOH A 101 433 433 HOH HOH . F 5 HOH A 102 434 434 HOH HOH . F 5 HOH A 103 435 435 HOH HOH . F 5 HOH A 104 436 436 HOH HOH . F 5 HOH A 105 437 437 HOH HOH . F 5 HOH A 106 438 438 HOH HOH . F 5 HOH A 107 439 439 HOH HOH . F 5 HOH A 108 440 440 HOH HOH . F 5 HOH A 109 441 441 HOH HOH . F 5 HOH A 110 442 442 HOH HOH . F 5 HOH A 111 443 443 HOH HOH . F 5 HOH A 112 444 444 HOH HOH . F 5 HOH A 113 445 445 HOH HOH . F 5 HOH A 114 446 446 HOH HOH . F 5 HOH A 115 447 447 HOH HOH . F 5 HOH A 116 448 448 HOH HOH . F 5 HOH A 117 449 449 HOH HOH . F 5 HOH A 118 450 450 HOH HOH . F 5 HOH A 119 451 451 HOH HOH . F 5 HOH A 120 452 452 HOH HOH . F 5 HOH A 121 453 453 HOH HOH . F 5 HOH A 122 454 454 HOH HOH . F 5 HOH A 123 455 455 HOH HOH . F 5 HOH A 124 456 456 HOH HOH . F 5 HOH A 125 457 457 HOH HOH . F 5 HOH A 126 458 458 HOH HOH . F 5 HOH A 127 459 459 HOH HOH . F 5 HOH A 128 460 460 HOH HOH . F 5 HOH A 129 461 461 HOH HOH . F 5 HOH A 130 462 462 HOH HOH . F 5 HOH A 131 463 463 HOH HOH . F 5 HOH A 132 464 464 HOH HOH . F 5 HOH A 133 465 465 HOH HOH . F 5 HOH A 134 466 466 HOH HOH . F 5 HOH A 135 467 467 HOH HOH . F 5 HOH A 136 468 468 HOH HOH . F 5 HOH A 137 469 469 HOH HOH . F 5 HOH A 138 470 470 HOH HOH . F 5 HOH A 139 471 471 HOH HOH . F 5 HOH A 140 472 472 HOH HOH . F 5 HOH A 141 473 473 HOH HOH . F 5 HOH A 142 474 474 HOH HOH . F 5 HOH A 143 475 475 HOH HOH . F 5 HOH A 144 476 476 HOH HOH . F 5 HOH A 145 477 477 HOH HOH . F 5 HOH A 146 478 478 HOH HOH . F 5 HOH A 147 479 479 HOH HOH . F 5 HOH A 148 480 480 HOH HOH . F 5 HOH A 149 481 481 HOH HOH . F 5 HOH A 150 482 482 HOH HOH . F 5 HOH A 151 483 483 HOH HOH . F 5 HOH A 152 484 484 HOH HOH . F 5 HOH A 153 485 485 HOH HOH . F 5 HOH A 154 486 486 HOH HOH . F 5 HOH A 155 487 487 HOH HOH . F 5 HOH A 156 488 488 HOH HOH . F 5 HOH A 157 489 489 HOH HOH . F 5 HOH A 158 490 490 HOH HOH . F 5 HOH A 159 491 491 HOH HOH . F 5 HOH A 160 492 492 HOH HOH . F 5 HOH A 161 493 493 HOH HOH . F 5 HOH A 162 494 494 HOH HOH . F 5 HOH A 163 495 495 HOH HOH . F 5 HOH A 164 496 496 HOH HOH . F 5 HOH A 165 497 497 HOH HOH . F 5 HOH A 166 498 498 HOH HOH . F 5 HOH A 167 499 499 HOH HOH . F 5 HOH A 168 500 500 HOH HOH . F 5 HOH A 169 501 501 HOH HOH . F 5 HOH A 170 502 502 HOH HOH . F 5 HOH A 171 503 503 HOH HOH . F 5 HOH A 172 504 504 HOH HOH . F 5 HOH A 173 505 505 HOH HOH . F 5 HOH A 174 506 506 HOH HOH . F 5 HOH A 175 507 507 HOH HOH . F 5 HOH A 176 508 508 HOH HOH . F 5 HOH A 177 509 509 HOH HOH . F 5 HOH A 178 510 510 HOH HOH . F 5 HOH A 179 511 511 HOH HOH . F 5 HOH A 180 512 512 HOH HOH . F 5 HOH A 181 513 513 HOH HOH . F 5 HOH A 182 514 514 HOH HOH . F 5 HOH A 183 515 515 HOH HOH . F 5 HOH A 184 516 516 HOH HOH . F 5 HOH A 185 517 517 HOH HOH . F 5 HOH A 186 518 518 HOH HOH . F 5 HOH A 187 519 519 HOH HOH . F 5 HOH A 188 520 520 HOH HOH . F 5 HOH A 189 521 521 HOH HOH . F 5 HOH A 190 522 522 HOH HOH . F 5 HOH A 191 523 523 HOH HOH . F 5 HOH A 192 524 524 HOH HOH . F 5 HOH A 193 525 525 HOH HOH . F 5 HOH A 194 526 526 HOH HOH . F 5 HOH A 195 527 527 HOH HOH . F 5 HOH A 196 528 528 HOH HOH . F 5 HOH A 197 529 529 HOH HOH . F 5 HOH A 198 530 530 HOH HOH . F 5 HOH A 199 531 531 HOH HOH . F 5 HOH A 200 532 532 HOH HOH . F 5 HOH A 201 533 533 HOH HOH . F 5 HOH A 202 534 534 HOH HOH . F 5 HOH A 203 535 535 HOH HOH . F 5 HOH A 204 536 536 HOH HOH . F 5 HOH A 205 537 537 HOH HOH . F 5 HOH A 206 538 538 HOH HOH . F 5 HOH A 207 539 539 HOH HOH . F 5 HOH A 208 540 540 HOH HOH . F 5 HOH A 209 541 541 HOH HOH . F 5 HOH A 210 542 542 HOH HOH . F 5 HOH A 211 543 543 HOH HOH . F 5 HOH A 212 544 544 HOH HOH . F 5 HOH A 213 545 545 HOH HOH . F 5 HOH A 214 546 546 HOH HOH . F 5 HOH A 215 547 547 HOH HOH . F 5 HOH A 216 548 548 HOH HOH . F 5 HOH A 217 549 549 HOH HOH . F 5 HOH A 218 550 550 HOH HOH . F 5 HOH A 219 551 551 HOH HOH . F 5 HOH A 220 552 552 HOH HOH . F 5 HOH A 221 553 553 HOH HOH . F 5 HOH A 222 554 554 HOH HOH . F 5 HOH A 223 555 555 HOH HOH . F 5 HOH A 224 556 556 HOH HOH . F 5 HOH A 225 557 557 HOH HOH . F 5 HOH A 226 558 558 HOH HOH . F 5 HOH A 227 559 559 HOH HOH . F 5 HOH A 228 560 560 HOH HOH . F 5 HOH A 229 561 561 HOH HOH . F 5 HOH A 230 562 562 HOH HOH . F 5 HOH A 231 563 563 HOH HOH . F 5 HOH A 232 564 564 HOH HOH . F 5 HOH A 233 565 565 HOH HOH . F 5 HOH A 234 566 566 HOH HOH . F 5 HOH A 235 567 567 HOH HOH . F 5 HOH A 236 568 568 HOH HOH . F 5 HOH A 237 569 569 HOH HOH . F 5 HOH A 238 570 570 HOH HOH . F 5 HOH A 239 571 571 HOH HOH . F 5 HOH A 240 572 572 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 4 _atom_site.Cartn_x -3.357 _atom_site.Cartn_y -13.667 _atom_site.Cartn_z 4.587 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 12.78 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 3001 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 1 #