data_3M0D
#
_model_server_result.job_id            pNXJTeB75mY8SaZEk5zqCQ 
_model_server_result.datetime_utc      '2024-11-22 21:42:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3m0d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    3M0D 
#
_exptl.entry_id    3M0D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3M0D 
_cell.length_a            91.867 
_cell.length_b            91.867 
_cell.length_c            88.702 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3M0D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        80 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA tetrameric 4 author_and_software_defined_assembly 1 
PISA tetrameric 4 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I 1 1 
D,E,I 2 2 
A,B,C,F,G,H 2 1 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 8_555 y,-x+1/2,z+1/4 0 1 0 -1 0 0 0 0 1 0 45.9335 22.1755 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 D SG CYS 42 D CYS 66 1_555 E ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? 
metalc ? metalc2 D SG CYS 45 D CYS 69 1_555 E ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? 
metalc ? metalc3 D NE2 HIS 62 D HIS 86 1_555 E ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc4 D SG CYS 69 D CYS 93 1_555 E ZN ZN . D ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3M0D 
_atom_sites.fract_transf_matrix[1][1]    0.010885 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010885 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011274 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 4 ZN D 1 401 401 ZN ZN . 
F 5 HOH A 1 1 1 HOH HOH . 
F 5 HOH A 2 2 2 HOH HOH . 
F 5 HOH A 3 5 5 HOH HOH . 
F 5 HOH A 4 12 12 HOH HOH . 
F 5 HOH A 5 15 15 HOH HOH . 
F 5 HOH A 6 17 17 HOH HOH . 
F 5 HOH A 7 18 18 HOH HOH . 
F 5 HOH A 8 22 22 HOH HOH . 
F 5 HOH A 9 23 23 HOH HOH . 
F 5 HOH A 10 24 24 HOH HOH . 
F 5 HOH A 11 25 25 HOH HOH . 
F 5 HOH A 12 31 31 HOH HOH . 
F 5 HOH A 13 32 32 HOH HOH . 
F 5 HOH A 14 41 41 HOH HOH . 
G 5 HOH B 1 8 8 HOH HOH . 
G 5 HOH B 2 13 13 HOH HOH . 
G 5 HOH B 3 14 14 HOH HOH . 
G 5 HOH B 4 20 20 HOH HOH . 
G 5 HOH B 5 28 28 HOH HOH . 
G 5 HOH B 6 37 37 HOH HOH . 
G 5 HOH B 7 39 39 HOH HOH . 
G 5 HOH B 8 42 42 HOH HOH . 
G 5 HOH B 9 100 100 HOH HOH . 
H 5 HOH C 1 3 3 HOH HOH . 
H 5 HOH C 2 4 4 HOH HOH . 
H 5 HOH C 3 6 6 HOH HOH . 
H 5 HOH C 4 9 9 HOH HOH . 
H 5 HOH C 5 10 10 HOH HOH . 
H 5 HOH C 6 19 19 HOH HOH . 
H 5 HOH C 7 27 27 HOH HOH . 
H 5 HOH C 8 29 29 HOH HOH . 
H 5 HOH C 9 30 30 HOH HOH . 
H 5 HOH C 10 34 34 HOH HOH . 
H 5 HOH C 11 35 35 HOH HOH . 
H 5 HOH C 12 38 38 HOH HOH . 
H 5 HOH C 13 40 40 HOH HOH . 
I 5 HOH D 1 7 7 HOH HOH . 
I 5 HOH D 2 11 11 HOH HOH . 
I 5 HOH D 3 16 16 HOH HOH . 
I 5 HOH D 4 21 21 HOH HOH . 
I 5 HOH D 5 100 33 HOH HOH . 
I 5 HOH D 6 101 101 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               39.628 
_atom_site.Cartn_y               11.351 
_atom_site.Cartn_z               3.485 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        56.14 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          D 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              71 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#