data_3M1D
#
_model_server_result.job_id            VYEtajoBIlJ9mCvZJMyYNQ 
_model_server_result.datetime_utc      '2024-10-19 03:52:09' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3m1d 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1000}' 
#
_entry.id    3M1D 
#
_exptl.entry_id    3M1D 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3M1D 
_cell.length_a            59.18 
_cell.length_b            59.18 
_cell.length_c            199.62 
_cell.Z_PDB               32 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3M1D 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        98 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 41 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 11 A CYS 45 1_555 A SG CYS 51 A CYS 85 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
disulf ? disulf2 B SG CYS 11 B CYS 45 1_555 B SG CYS 51 B CYS 85 5_454 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc1 A SG CYS 49 A CYS 83 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.351 ? 
metalc ? metalc2 A SG CYS 52 A CYS 86 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? 
metalc ? metalc3 A NE2 HIS 69 A HIS 103 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? 
metalc ? metalc4 A SG CYS 76 A CYS 110 1_555 C ZN ZN . A ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.344 ? 
metalc ? metalc5 B SG CYS 49 B CYS 83 1_555 D ZN ZN . B ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? 
metalc ? metalc6 B SG CYS 52 B CYS 86 1_555 D ZN ZN . B ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.412 ? 
metalc ? metalc7 B NE2 HIS 69 B HIS 103 1_555 D ZN ZN . B ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc8 B SG CYS 76 B CYS 110 1_555 D ZN ZN . B ZN 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3M1D 
_atom_sites.fract_transf_matrix[1][1]    0.016898 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016898 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00501 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 ZN A 1 1000 1000 ZN ZN . 
D 2 ZN B 1 1000 1000 ZN ZN . 
E 3 HOH A 1 18 18 HOH HOH . 
E 3 HOH A 2 20 20 HOH HOH . 
E 3 HOH A 3 21 21 HOH HOH . 
E 3 HOH A 4 23 23 HOH HOH . 
E 3 HOH A 5 27 27 HOH HOH . 
E 3 HOH A 6 30 30 HOH HOH . 
E 3 HOH A 7 33 33 HOH HOH . 
E 3 HOH A 8 120 42 HOH HOH . 
E 3 HOH A 9 121 43 HOH HOH . 
E 3 HOH A 10 122 44 HOH HOH . 
E 3 HOH A 11 123 46 HOH HOH . 
E 3 HOH A 12 124 47 HOH HOH . 
E 3 HOH A 13 125 125 HOH HOH . 
E 3 HOH A 14 126 126 HOH HOH . 
E 3 HOH A 15 127 48 HOH HOH . 
E 3 HOH A 16 128 50 HOH HOH . 
E 3 HOH A 17 129 129 HOH HOH . 
E 3 HOH A 18 130 53 HOH HOH . 
E 3 HOH A 19 131 131 HOH HOH . 
E 3 HOH A 20 132 132 HOH HOH . 
E 3 HOH A 21 133 133 HOH HOH . 
E 3 HOH A 22 134 134 HOH HOH . 
E 3 HOH A 23 135 135 HOH HOH . 
E 3 HOH A 24 136 136 HOH HOH . 
E 3 HOH A 25 137 56 HOH HOH . 
E 3 HOH A 26 138 65 HOH HOH . 
E 3 HOH A 27 139 70 HOH HOH . 
E 3 HOH A 28 140 72 HOH HOH . 
E 3 HOH A 29 141 73 HOH HOH . 
E 3 HOH A 30 142 74 HOH HOH . 
E 3 HOH A 31 143 143 HOH HOH . 
E 3 HOH A 32 144 80 HOH HOH . 
E 3 HOH A 33 145 145 HOH HOH . 
E 3 HOH A 34 146 85 HOH HOH . 
E 3 HOH A 35 147 147 HOH HOH . 
E 3 HOH A 36 148 148 HOH HOH . 
E 3 HOH A 37 149 87 HOH HOH . 
E 3 HOH A 38 150 89 HOH HOH . 
E 3 HOH A 39 151 90 HOH HOH . 
E 3 HOH A 40 152 91 HOH HOH . 
E 3 HOH A 41 153 92 HOH HOH . 
E 3 HOH A 42 154 93 HOH HOH . 
E 3 HOH A 43 155 94 HOH HOH . 
E 3 HOH A 44 156 96 HOH HOH . 
E 3 HOH A 45 157 97 HOH HOH . 
E 3 HOH A 46 158 99 HOH HOH . 
E 3 HOH A 47 159 100 HOH HOH . 
E 3 HOH A 48 160 101 HOH HOH . 
E 3 HOH A 49 161 103 HOH HOH . 
E 3 HOH A 50 162 105 HOH HOH . 
E 3 HOH A 51 163 106 HOH HOH . 
E 3 HOH A 52 164 107 HOH HOH . 
E 3 HOH A 53 165 112 HOH HOH . 
E 3 HOH A 54 166 113 HOH HOH . 
E 3 HOH A 55 167 115 HOH HOH . 
E 3 HOH A 56 168 117 HOH HOH . 
E 3 HOH A 57 169 119 HOH HOH . 
E 3 HOH A 58 170 36 HOH HOH . 
E 3 HOH A 59 171 39 HOH HOH . 
F 3 HOH B 1 14 14 HOH HOH . 
F 3 HOH B 2 31 31 HOH HOH . 
F 3 HOH B 3 34 34 HOH HOH . 
F 3 HOH B 4 120 120 HOH HOH . 
F 3 HOH B 5 121 121 HOH HOH . 
F 3 HOH B 6 122 122 HOH HOH . 
F 3 HOH B 7 123 123 HOH HOH . 
F 3 HOH B 8 124 124 HOH HOH . 
F 3 HOH B 9 125 41 HOH HOH . 
F 3 HOH B 10 126 78 HOH HOH . 
F 3 HOH B 11 127 79 HOH HOH . 
F 3 HOH B 12 128 81 HOH HOH . 
F 3 HOH B 13 129 82 HOH HOH . 
F 3 HOH B 14 130 130 HOH HOH . 
F 3 HOH B 15 131 83 HOH HOH . 
F 3 HOH B 16 132 95 HOH HOH . 
F 3 HOH B 17 133 104 HOH HOH . 
F 3 HOH B 18 134 108 HOH HOH . 
F 3 HOH B 19 135 118 HOH HOH . 
F 3 HOH B 20 137 137 HOH HOH . 
F 3 HOH B 21 138 138 HOH HOH . 
F 3 HOH B 22 139 139 HOH HOH . 
F 3 HOH B 23 140 140 HOH HOH . 
F 3 HOH B 24 141 141 HOH HOH . 
F 3 HOH B 25 142 142 HOH HOH . 
F 3 HOH B 26 144 144 HOH HOH . 
F 3 HOH B 27 149 149 HOH HOH . 
F 3 HOH B 28 150 150 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         C 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -11.069 
_atom_site.Cartn_y               17.837 
_atom_site.Cartn_z               -7.029 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        23.9 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           1000 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              55 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           1 
#