data_3M1P # _model_server_result.job_id YuVKeo8TI6nvrPfwssuC_Q _model_server_result.datetime_utc '2024-12-15 03:39:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3m1p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":154}' # _entry.id 3M1P # _exptl.entry_id 3M1P _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3M1P _cell.length_a 92.763 _cell.length_b 92.763 _cell.length_c 93.094 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3M1P _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 7_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3M1P _atom_sites.fract_transf_matrix[1][1] 0.01078 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01078 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010742 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PO4 A 1 154 2 PO4 PO4 . D 2 PO4 B 1 154 1 PO4 PO4 . E 3 HOH A 1 155 2 HOH HOH . E 3 HOH A 2 156 3 HOH HOH . E 3 HOH A 3 157 4 HOH HOH . E 3 HOH A 4 158 5 HOH HOH . E 3 HOH A 5 159 6 HOH HOH . E 3 HOH A 6 160 9 HOH HOH . E 3 HOH A 7 161 10 HOH HOH . E 3 HOH A 8 162 12 HOH HOH . E 3 HOH A 9 163 14 HOH HOH . E 3 HOH A 10 164 15 HOH HOH . E 3 HOH A 11 165 17 HOH HOH . E 3 HOH A 12 166 18 HOH HOH . E 3 HOH A 13 167 20 HOH HOH . E 3 HOH A 14 168 23 HOH HOH . E 3 HOH A 15 169 24 HOH HOH . E 3 HOH A 16 170 27 HOH HOH . E 3 HOH A 17 171 29 HOH HOH . E 3 HOH A 18 172 31 HOH HOH . E 3 HOH A 19 173 33 HOH HOH . E 3 HOH A 20 174 34 HOH HOH . E 3 HOH A 21 175 35 HOH HOH . E 3 HOH A 22 176 43 HOH HOH . E 3 HOH A 23 177 37 HOH HOH . E 3 HOH A 24 178 38 HOH HOH . E 3 HOH A 25 179 39 HOH HOH . E 3 HOH A 26 180 40 HOH HOH . E 3 HOH A 27 181 41 HOH HOH . E 3 HOH A 28 182 44 HOH HOH . E 3 HOH A 29 183 45 HOH HOH . E 3 HOH A 30 184 46 HOH HOH . E 3 HOH A 31 185 47 HOH HOH . E 3 HOH A 32 186 48 HOH HOH . E 3 HOH A 33 187 49 HOH HOH . E 3 HOH A 34 188 50 HOH HOH . E 3 HOH A 35 189 52 HOH HOH . E 3 HOH A 36 190 53 HOH HOH . E 3 HOH A 37 191 54 HOH HOH . E 3 HOH A 38 192 56 HOH HOH . E 3 HOH A 39 193 59 HOH HOH . E 3 HOH A 40 194 60 HOH HOH . E 3 HOH A 41 195 61 HOH HOH . E 3 HOH A 42 196 62 HOH HOH . E 3 HOH A 43 197 63 HOH HOH . E 3 HOH A 44 198 64 HOH HOH . E 3 HOH A 45 199 65 HOH HOH . E 3 HOH A 46 200 66 HOH HOH . E 3 HOH A 47 201 68 HOH HOH . E 3 HOH A 48 202 69 HOH HOH . E 3 HOH A 49 203 1 HOH HOH . E 3 HOH A 50 204 2 HOH HOH . E 3 HOH A 51 205 3 HOH HOH . E 3 HOH A 52 206 59 HOH HOH . E 3 HOH A 53 207 5 HOH HOH . E 3 HOH A 54 208 8 HOH HOH . E 3 HOH A 55 209 10 HOH HOH . E 3 HOH A 56 210 15 HOH HOH . E 3 HOH A 57 211 20 HOH HOH . E 3 HOH A 58 212 21 HOH HOH . E 3 HOH A 59 213 23 HOH HOH . E 3 HOH A 60 214 28 HOH HOH . E 3 HOH A 61 215 29 HOH HOH . E 3 HOH A 62 216 33 HOH HOH . E 3 HOH A 63 217 34 HOH HOH . E 3 HOH A 64 218 35 HOH HOH . E 3 HOH A 65 219 45 HOH HOH . E 3 HOH A 66 220 49 HOH HOH . E 3 HOH A 67 221 50 HOH HOH . E 3 HOH A 68 222 52 HOH HOH . E 3 HOH A 69 223 53 HOH HOH . E 3 HOH A 70 224 54 HOH HOH . E 3 HOH A 71 225 58 HOH HOH . E 3 HOH A 72 226 64 HOH HOH . F 3 HOH B 1 155 1 HOH HOH . F 3 HOH B 2 156 7 HOH HOH . F 3 HOH B 3 157 8 HOH HOH . F 3 HOH B 4 158 11 HOH HOH . F 3 HOH B 5 159 13 HOH HOH . F 3 HOH B 6 160 16 HOH HOH . F 3 HOH B 7 161 19 HOH HOH . F 3 HOH B 8 162 21 HOH HOH . F 3 HOH B 9 163 22 HOH HOH . F 3 HOH B 10 164 25 HOH HOH . F 3 HOH B 11 165 26 HOH HOH . F 3 HOH B 12 166 28 HOH HOH . F 3 HOH B 13 167 30 HOH HOH . F 3 HOH B 14 168 32 HOH HOH . F 3 HOH B 15 169 42 HOH HOH . F 3 HOH B 16 171 51 HOH HOH . F 3 HOH B 17 172 55 HOH HOH . F 3 HOH B 18 173 57 HOH HOH . F 3 HOH B 19 174 58 HOH HOH . F 3 HOH B 20 175 67 HOH HOH . F 3 HOH B 21 176 36 HOH HOH . F 3 HOH B 22 177 7 HOH HOH . F 3 HOH B 23 178 9 HOH HOH . F 3 HOH B 24 179 11 HOH HOH . F 3 HOH B 25 180 12 HOH HOH . F 3 HOH B 26 181 13 HOH HOH . F 3 HOH B 27 182 14 HOH HOH . F 3 HOH B 28 183 16 HOH HOH . F 3 HOH B 29 184 17 HOH HOH . F 3 HOH B 30 185 18 HOH HOH . F 3 HOH B 31 186 19 HOH HOH . F 3 HOH B 32 187 22 HOH HOH . F 3 HOH B 33 188 24 HOH HOH . F 3 HOH B 34 189 25 HOH HOH . F 3 HOH B 35 190 26 HOH HOH . F 3 HOH B 36 191 27 HOH HOH . F 3 HOH B 37 192 30 HOH HOH . F 3 HOH B 38 193 31 HOH HOH . F 3 HOH B 39 194 32 HOH HOH . F 3 HOH B 40 195 36 HOH HOH . F 3 HOH B 41 196 37 HOH HOH . F 3 HOH B 42 197 38 HOH HOH . F 3 HOH B 43 198 39 HOH HOH . F 3 HOH B 44 199 40 HOH HOH . F 3 HOH B 45 200 41 HOH HOH . F 3 HOH B 46 201 42 HOH HOH . F 3 HOH B 47 202 43 HOH HOH . F 3 HOH B 48 203 44 HOH HOH . F 3 HOH B 49 204 46 HOH HOH . F 3 HOH B 50 205 47 HOH HOH . F 3 HOH B 51 206 4 HOH HOH . F 3 HOH B 52 207 51 HOH HOH . F 3 HOH B 53 208 55 HOH HOH . F 3 HOH B 54 209 56 HOH HOH . F 3 HOH B 55 210 57 HOH HOH . F 3 HOH B 56 211 6 HOH HOH . F 3 HOH B 57 212 60 HOH HOH . F 3 HOH B 58 213 61 HOH HOH . F 3 HOH B 59 214 62 HOH HOH . F 3 HOH B 60 215 63 HOH HOH . F 3 HOH B 61 216 65 HOH HOH . F 3 HOH B 62 217 66 HOH HOH . F 3 HOH B 63 218 67 HOH HOH . F 3 HOH B 64 219 48 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 2 42.877 29.708 12.542 0.5 21.45 ? P PO4 154 B 1 HETATM 2 O O1 PO4 . . . D 2 43.409 29.994 13.919 0.5 22.08 ? O1 PO4 154 B 1 HETATM 3 O O2 PO4 . . . D 2 41.375 29.619 12.631 0.5 22.08 ? O2 PO4 154 B 1 HETATM 4 O O3 PO4 . . . D 2 43.42 28.406 12.018 0.5 20.3 ? O3 PO4 154 B 1 HETATM 5 O O4 PO4 . . . D 2 43.275 30.84 11.625 0.5 21.61 ? O4 PO4 154 B 1 # _model_server_stats.io_time_ms 83 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 358 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #