data_3M2W # _model_server_result.job_id BT1LRiOWfRiheJMOXQ72Xg _model_server_result.datetime_utc '2024-12-26 21:13:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3m2w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3M2W # _exptl.entry_id 3M2W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 388.437 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "2'-(2-fluorophenyl)-1-methyl-6',8',9',11'-tetrahydrospiro[azetidine-3,10'-pyrido[3',4':4,5]pyrrolo[2,3-f]isoquinolin]-7'(5'H)-one" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3M2W _cell.length_a 102.982 _cell.length_b 102.982 _cell.length_c 165.433 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3M2W _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 D O HOH . A HOH 2 1_555 C MG MG . A MG 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.46 ? metalc ? metalc2 A O SER 68 A SER 112 1_555 C MG MG . A MG 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc3 A O CYS 70 A CYS 114 1_555 C MG MG . A MG 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc4 A O ILE 73 A ILE 117 1_555 C MG MG . A MG 365 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.274 ? metalc ? metalc5 C MG MG . A MG 365 1_555 D O HOH . A HOH 366 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.418 ? # _chem_comp.formula 'C23 H21 F N4 O' _chem_comp.formula_weight 388.437 _chem_comp.id L8I _chem_comp.mon_nstd_flag . _chem_comp.name "2'-(2-fluorophenyl)-1-methyl-6',8',9',11'-tetrahydrospiro[azetidine-3,10'-pyrido[3',4':4,5]pyrrolo[2,3-f]isoquinolin]-7'(5'H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F1 C2 L8I sing 173 n n C2 C3 L8I doub 174 n y C2 C10 L8I sing 175 n y C3 C4 L8I sing 176 n y C3 C12 L8I sing 177 n y C4 C6 L8I doub 178 n y C6 C8 L8I sing 179 n y C8 C10 L8I doub 180 n y C12 N13 L8I doub 181 n y C12 C18 L8I sing 182 n y N13 C14 L8I sing 183 n y C14 C16 L8I doub 184 n y C16 C17 L8I sing 185 n y C16 C29 L8I sing 186 n n C17 C18 L8I doub 187 n y C17 C20 L8I sing 188 n y C20 N21 L8I sing 189 n y C20 C25 L8I doub 190 n y N21 C23 L8I sing 191 n y C23 C24 L8I doub 192 n y C23 C38 L8I sing 193 n n C24 C25 L8I sing 194 n y C24 C32 L8I sing 195 n n C25 C26 L8I sing 196 n n C26 C29 L8I sing 197 n n C32 N33 L8I sing 198 n n C32 O50 L8I doub 199 n n N33 C35 L8I sing 200 n n C35 C38 L8I sing 201 n n C38 C39 L8I sing 202 n n C38 C43 L8I sing 203 n n C39 N42 L8I sing 204 n n N42 C43 L8I sing 205 n n N42 C46 L8I sing 206 n n C4 H4 L8I sing 207 n n C6 H6 L8I sing 208 n n C8 H8 L8I sing 209 n n C10 H10 L8I sing 210 n n C14 H14 L8I sing 211 n n C18 H18 L8I sing 212 n n N21 HN21 L8I sing 213 n n C26 H26 L8I sing 214 n n C26 H26A L8I sing 215 n n C29 H29 L8I sing 216 n n C29 H29A L8I sing 217 n n N33 HN33 L8I sing 218 n n C35 H35 L8I sing 219 n n C35 H35A L8I sing 220 n n C39 H39 L8I sing 221 n n C39 H39A L8I sing 222 n n C43 H43 L8I sing 223 n n C43 H43A L8I sing 224 n n C46 H46 L8I sing 225 n n C46 H46A L8I sing 226 n n C46 H46B L8I sing 227 n n # _atom_sites.entry_id 3M2W _atom_sites.fract_transf_matrix[1][1] 0.00971 _atom_sites.fract_transf_matrix[1][2] 0.005606 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011213 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006045 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 L8I A 1 1 1 L8I L8I . C 3 MG A 1 365 1 MG MG . D 4 HOH A 1 2 2 HOH HOH . D 4 HOH A 2 3 3 HOH HOH . D 4 HOH A 3 4 4 HOH HOH . D 4 HOH A 4 5 5 HOH HOH . D 4 HOH A 5 6 6 HOH HOH . D 4 HOH A 6 7 7 HOH HOH . D 4 HOH A 7 8 8 HOH HOH . D 4 HOH A 8 9 9 HOH HOH . D 4 HOH A 9 10 10 HOH HOH . D 4 HOH A 10 11 11 HOH HOH . D 4 HOH A 11 12 12 HOH HOH . D 4 HOH A 12 13 13 HOH HOH . D 4 HOH A 13 14 14 HOH HOH . D 4 HOH A 14 15 15 HOH HOH . D 4 HOH A 15 16 16 HOH HOH . D 4 HOH A 16 17 17 HOH HOH . D 4 HOH A 17 18 18 HOH HOH . D 4 HOH A 18 19 19 HOH HOH . D 4 HOH A 19 20 20 HOH HOH . D 4 HOH A 20 21 21 HOH HOH . D 4 HOH A 21 22 22 HOH HOH . D 4 HOH A 22 23 23 HOH HOH . D 4 HOH A 23 24 24 HOH HOH . D 4 HOH A 24 25 25 HOH HOH . D 4 HOH A 25 26 26 HOH HOH . D 4 HOH A 26 27 27 HOH HOH . D 4 HOH A 27 28 28 HOH HOH . D 4 HOH A 28 29 29 HOH HOH . D 4 HOH A 29 30 30 HOH HOH . D 4 HOH A 30 31 31 HOH HOH . D 4 HOH A 31 32 32 HOH HOH . D 4 HOH A 32 33 33 HOH HOH . D 4 HOH A 33 34 34 HOH HOH . D 4 HOH A 34 35 35 HOH HOH . D 4 HOH A 35 36 36 HOH HOH . D 4 HOH A 36 37 37 HOH HOH . D 4 HOH A 37 38 38 HOH HOH . D 4 HOH A 38 39 39 HOH HOH . D 4 HOH A 39 40 40 HOH HOH . D 4 HOH A 40 41 41 HOH HOH . D 4 HOH A 41 42 42 HOH HOH . D 4 HOH A 42 43 43 HOH HOH . D 4 HOH A 43 44 44 HOH HOH . D 4 HOH A 44 366 1 HOH HOH . D 4 HOH A 45 367 45 HOH HOH . D 4 HOH A 46 368 46 HOH HOH . D 4 HOH A 47 369 47 HOH HOH . D 4 HOH A 48 370 48 HOH HOH . D 4 HOH A 49 371 49 HOH HOH . D 4 HOH A 50 372 50 HOH HOH . D 4 HOH A 51 373 51 HOH HOH . D 4 HOH A 52 374 52 HOH HOH . D 4 HOH A 53 375 53 HOH HOH . D 4 HOH A 54 376 54 HOH HOH . D 4 HOH A 55 377 55 HOH HOH . D 4 HOH A 56 378 56 HOH HOH . D 4 HOH A 57 379 57 HOH HOH . D 4 HOH A 58 380 58 HOH HOH . D 4 HOH A 59 381 59 HOH HOH . D 4 HOH A 60 382 60 HOH HOH . D 4 HOH A 61 383 61 HOH HOH . D 4 HOH A 62 384 62 HOH HOH . D 4 HOH A 63 385 63 HOH HOH . D 4 HOH A 64 386 64 HOH HOH . D 4 HOH A 65 387 65 HOH HOH . D 4 HOH A 66 388 66 HOH HOH . D 4 HOH A 67 389 67 HOH HOH . D 4 HOH A 68 390 68 HOH HOH . D 4 HOH A 69 391 69 HOH HOH . D 4 HOH A 70 392 70 HOH HOH . D 4 HOH A 71 393 71 HOH HOH . D 4 HOH A 72 394 72 HOH HOH . D 4 HOH A 73 395 73 HOH HOH . D 4 HOH A 74 396 74 HOH HOH . D 4 HOH A 75 397 75 HOH HOH . D 4 HOH A 76 398 76 HOH HOH . D 4 HOH A 77 399 77 HOH HOH . D 4 HOH A 78 400 78 HOH HOH . D 4 HOH A 79 401 79 HOH HOH . D 4 HOH A 80 402 80 HOH HOH . D 4 HOH A 81 403 81 HOH HOH . D 4 HOH A 82 404 82 HOH HOH . D 4 HOH A 83 405 83 HOH HOH . D 4 HOH A 84 406 84 HOH HOH . D 4 HOH A 85 407 85 HOH HOH . D 4 HOH A 86 408 86 HOH HOH . D 4 HOH A 87 409 87 HOH HOH . D 4 HOH A 88 410 88 HOH HOH . D 4 HOH A 89 411 89 HOH HOH . D 4 HOH A 90 412 90 HOH HOH . D 4 HOH A 91 413 91 HOH HOH . D 4 HOH A 92 414 92 HOH HOH . D 4 HOH A 93 415 93 HOH HOH . D 4 HOH A 94 416 94 HOH HOH . D 4 HOH A 95 417 95 HOH HOH . D 4 HOH A 96 418 96 HOH HOH . D 4 HOH A 97 419 97 HOH HOH . D 4 HOH A 98 420 98 HOH HOH . D 4 HOH A 99 421 99 HOH HOH . D 4 HOH A 100 422 100 HOH HOH . D 4 HOH A 101 423 101 HOH HOH . D 4 HOH A 102 424 102 HOH HOH . D 4 HOH A 103 425 103 HOH HOH . D 4 HOH A 104 426 104 HOH HOH . D 4 HOH A 105 427 105 HOH HOH . D 4 HOH A 106 428 106 HOH HOH . D 4 HOH A 107 429 107 HOH HOH . D 4 HOH A 108 430 108 HOH HOH . D 4 HOH A 109 431 109 HOH HOH . D 4 HOH A 110 432 110 HOH HOH . D 4 HOH A 111 433 111 HOH HOH . D 4 HOH A 112 434 112 HOH HOH . D 4 HOH A 113 435 113 HOH HOH . D 4 HOH A 114 436 114 HOH HOH . D 4 HOH A 115 437 115 HOH HOH . D 4 HOH A 116 438 116 HOH HOH . D 4 HOH A 117 439 117 HOH HOH . D 4 HOH A 118 440 118 HOH HOH . D 4 HOH A 119 441 119 HOH HOH . D 4 HOH A 120 442 120 HOH HOH . D 4 HOH A 121 443 121 HOH HOH . D 4 HOH A 122 444 122 HOH HOH . D 4 HOH A 123 445 123 HOH HOH . D 4 HOH A 124 446 124 HOH HOH . D 4 HOH A 125 447 125 HOH HOH . D 4 HOH A 126 448 126 HOH HOH . D 4 HOH A 127 449 127 HOH HOH . D 4 HOH A 128 450 128 HOH HOH . D 4 HOH A 129 451 129 HOH HOH . D 4 HOH A 130 452 130 HOH HOH . D 4 HOH A 131 453 131 HOH HOH . D 4 HOH A 132 454 132 HOH HOH . D 4 HOH A 133 455 133 HOH HOH . D 4 HOH A 134 456 134 HOH HOH . D 4 HOH A 135 457 135 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 F F1 L8I . . . B 2 35.606 3.456 14.952 1 32.43 ? F1 L8I 1 A 1 HETATM 2 C C2 L8I . . . B 2 35.468 3.825 13.674 1 28.37 ? C2 L8I 1 A 1 HETATM 3 C C3 L8I . . . B 2 36.37 4.69 13.054 1 24.01 ? C3 L8I 1 A 1 HETATM 4 C C4 L8I . . . B 2 36.208 5.054 11.728 1 28.65 ? C4 L8I 1 A 1 HETATM 5 C C6 L8I . . . B 2 35.128 4.551 11.011 1 32.11 ? C6 L8I 1 A 1 HETATM 6 C C8 L8I . . . B 2 34.231 3.672 11.626 1 26.79 ? C8 L8I 1 A 1 HETATM 7 C C10 L8I . . . B 2 34.392 3.318 12.955 1 26.2 ? C10 L8I 1 A 1 HETATM 8 C C12 L8I . . . B 2 37.513 5.277 13.769 1 25.53 ? C12 L8I 1 A 1 HETATM 9 N N13 L8I . . . B 2 38.582 5.604 13.02 1 23.62 ? N13 L8I 1 A 1 HETATM 10 C C14 L8I . . . B 2 39.667 6.175 13.552 1 26.47 ? C14 L8I 1 A 1 HETATM 11 C C16 L8I . . . B 2 39.714 6.453 14.918 1 25.66 ? C16 L8I 1 A 1 HETATM 12 C C17 L8I . . . B 2 38.612 6.118 15.706 1 21.61 ? C17 L8I 1 A 1 HETATM 13 C C18 L8I . . . B 2 37.48 5.544 15.14 1 23.46 ? C18 L8I 1 A 1 HETATM 14 C C20 L8I . . . B 2 38.68 6.431 17.155 1 18.94 ? C20 L8I 1 A 1 HETATM 15 N N21 L8I . . . B 2 37.917 6.022 18.117 1 20.34 ? N21 L8I 1 A 1 HETATM 16 C C23 L8I . . . B 2 38.293 6.531 19.268 1 30.02 ? C23 L8I 1 A 1 HETATM 17 C C24 L8I . . . B 2 39.369 7.324 19.081 1 24.37 ? C24 L8I 1 A 1 HETATM 18 C C25 L8I . . . B 2 39.618 7.252 17.636 1 23.04 ? C25 L8I 1 A 1 HETATM 19 C C26 L8I . . . B 2 40.659 7.936 16.8 1 20.31 ? C26 L8I 1 A 1 HETATM 20 C C29 L8I . . . B 2 40.967 7.094 15.533 1 23.88 ? C29 L8I 1 A 1 HETATM 21 C C32 L8I . . . B 2 40.007 8.083 20.168 1 26.73 ? C32 L8I 1 A 1 HETATM 22 N N33 L8I . . . B 2 39.413 8.079 21.376 1 31.52 ? N33 L8I 1 A 1 HETATM 23 C C35 L8I . . . B 2 38.182 7.349 21.674 1 31.63 ? C35 L8I 1 A 1 HETATM 24 C C38 L8I . . . B 2 37.702 6.302 20.639 1 32.93 ? C38 L8I 1 A 1 HETATM 25 C C39 L8I . . . B 2 37.985 4.839 21.054 1 40.58 ? C39 L8I 1 A 1 HETATM 26 N N42 L8I . . . B 2 36.571 4.678 21.464 1 43.85 ? N42 L8I 1 A 1 HETATM 27 C C43 L8I . . . B 2 36.204 5.981 20.83 1 36.81 ? C43 L8I 1 A 1 HETATM 28 C C46 L8I . . . B 2 36.346 4.523 22.932 1 46.27 ? C46 L8I 1 A 1 HETATM 29 O O50 L8I . . . B 2 41.014 8.755 19.985 1 26.18 ? O50 L8I 1 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 29 #