data_3M3G # _model_server_result.job_id TG8V1f60nSEO4zXXywgENA _model_server_result.datetime_utc '2024-11-22 17:43:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3m3g # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":3}' # _entry.id 3M3G # _exptl.entry_id 3M3G _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 13 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3M3G _cell.length_a 28.238 _cell.length_b 46.365 _cell.length_c 88.104 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3M3G _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 21 A CYS 39 1_555 A SG CYS 60 A CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf2 A SG CYS 63 A CYS 81 1_555 A SG CYS 118 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.05 ? metalc ? metalc1 A NE2 HIS 71 A HIS 89 1_555 D ZN ZN . A ZN 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # _atom_sites.entry_id 3M3G _atom_sites.fract_transf_matrix[1][1] 0.035413 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021568 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BR A 1 1 1 BR BR . C 2 BR A 1 2 2 BR BR . D 3 ZN A 1 139 1 ZN ZN . E 4 EDO A 1 140 1 EDO EDO . F 4 EDO A 1 141 2 EDO EDO . G 4 EDO A 1 3 3 EDO EDO . H 4 EDO A 1 4 4 EDO EDO . I 4 EDO A 1 5 5 EDO EDO . J 4 EDO A 1 6 6 EDO EDO . K 4 EDO A 1 7 7 EDO EDO . L 4 EDO A 1 8 8 EDO EDO . M 4 EDO A 1 9 9 EDO EDO . N 4 EDO A 1 10 10 EDO EDO . O 4 EDO A 1 11 11 EDO EDO . P 4 EDO A 1 12 12 EDO EDO . Q 4 EDO A 1 13 13 EDO EDO . R 5 HOH A 1 14 14 HOH HOH . R 5 HOH A 2 15 15 HOH HOH . R 5 HOH A 3 16 16 HOH HOH . R 5 HOH A 4 17 17 HOH HOH . R 5 HOH A 5 18 18 HOH HOH . R 5 HOH A 6 142 1 HOH HOH . R 5 HOH A 7 143 2 HOH HOH . R 5 HOH A 8 144 3 HOH HOH . R 5 HOH A 9 145 4 HOH HOH . R 5 HOH A 10 146 5 HOH HOH . R 5 HOH A 11 147 6 HOH HOH . R 5 HOH A 12 148 7 HOH HOH . R 5 HOH A 13 149 8 HOH HOH . R 5 HOH A 14 150 9 HOH HOH . R 5 HOH A 15 151 10 HOH HOH . R 5 HOH A 16 152 11 HOH HOH . R 5 HOH A 17 153 12 HOH HOH . R 5 HOH A 18 154 13 HOH HOH . R 5 HOH A 19 155 19 HOH HOH . R 5 HOH A 20 156 20 HOH HOH . R 5 HOH A 21 157 21 HOH HOH . R 5 HOH A 22 158 22 HOH HOH . R 5 HOH A 23 159 23 HOH HOH . R 5 HOH A 24 160 24 HOH HOH . R 5 HOH A 25 161 25 HOH HOH . R 5 HOH A 26 162 26 HOH HOH . R 5 HOH A 27 163 27 HOH HOH . R 5 HOH A 28 164 28 HOH HOH . R 5 HOH A 29 165 29 HOH HOH . R 5 HOH A 30 166 30 HOH HOH . R 5 HOH A 31 167 31 HOH HOH . R 5 HOH A 32 168 32 HOH HOH . R 5 HOH A 33 169 33 HOH HOH . R 5 HOH A 34 170 34 HOH HOH . R 5 HOH A 35 171 35 HOH HOH . R 5 HOH A 36 172 36 HOH HOH . R 5 HOH A 37 173 37 HOH HOH . R 5 HOH A 38 174 38 HOH HOH . R 5 HOH A 39 175 39 HOH HOH . R 5 HOH A 40 176 40 HOH HOH . R 5 HOH A 41 177 41 HOH HOH . R 5 HOH A 42 178 42 HOH HOH . R 5 HOH A 43 179 43 HOH HOH . R 5 HOH A 44 180 44 HOH HOH . R 5 HOH A 45 181 45 HOH HOH . R 5 HOH A 46 182 46 HOH HOH . R 5 HOH A 47 183 47 HOH HOH . R 5 HOH A 48 184 48 HOH HOH . R 5 HOH A 49 185 49 HOH HOH . R 5 HOH A 50 186 50 HOH HOH . R 5 HOH A 51 187 51 HOH HOH . R 5 HOH A 52 188 52 HOH HOH . R 5 HOH A 53 189 53 HOH HOH . R 5 HOH A 54 190 54 HOH HOH . R 5 HOH A 55 191 55 HOH HOH . R 5 HOH A 56 192 56 HOH HOH . R 5 HOH A 57 193 57 HOH HOH . R 5 HOH A 58 194 58 HOH HOH . R 5 HOH A 59 195 59 HOH HOH . R 5 HOH A 60 196 60 HOH HOH . R 5 HOH A 61 197 61 HOH HOH . R 5 HOH A 62 198 62 HOH HOH . R 5 HOH A 63 199 63 HOH HOH . R 5 HOH A 64 200 64 HOH HOH . R 5 HOH A 65 201 65 HOH HOH . R 5 HOH A 66 202 66 HOH HOH . R 5 HOH A 67 203 67 HOH HOH . R 5 HOH A 68 204 68 HOH HOH . R 5 HOH A 69 205 69 HOH HOH . R 5 HOH A 70 206 70 HOH HOH . R 5 HOH A 71 207 71 HOH HOH . R 5 HOH A 72 208 72 HOH HOH . R 5 HOH A 73 209 73 HOH HOH . R 5 HOH A 74 210 74 HOH HOH . R 5 HOH A 75 211 75 HOH HOH . R 5 HOH A 76 212 76 HOH HOH . R 5 HOH A 77 213 77 HOH HOH . R 5 HOH A 78 214 78 HOH HOH . R 5 HOH A 79 215 79 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . G 4 33.011 11.779 19.479 1 19.54 ? C1 EDO 3 A 1 HETATM 2 O O1 EDO . . . G 4 34.367 11.538 19.863 1 26.74 ? O1 EDO 3 A 1 HETATM 3 C C2 EDO . . . G 4 32.859 13.268 19.211 1 15.71 ? C2 EDO 3 A 1 HETATM 4 O O2 EDO . . . G 4 31.791 13.8 19.993 1 22.15 ? O2 EDO 3 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #