data_3M74
#
_model_server_result.job_id            UmlBAX9L-n7TpRc5e-6mkg 
_model_server_result.datetime_utc      '2024-11-23 09:55:10' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3m74 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":315}' 
#
_entry.id    3M74 
#
_exptl.entry_id    3M74 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              292.369 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            'octyl beta-D-glucopyranoside' 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3M74 
_cell.length_a            96.072 
_cell.length_b            96.072 
_cell.length_c            136.037 
_cell.Z_PDB               9 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3M74 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        146 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2,3 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -y,x-y-1,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 48.036 -83.200793 0 
3 'crystal symmetry operation' 3_655 -x+y+1,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 96.072 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
#
_chem_comp.formula           'C14 H28 O6' 
_chem_comp.formula_weight    292.369 
_chem_comp.id                BOG 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              'octyl beta-D-glucopyranoside' 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 BOG sing 70 n n 
C1 C2 BOG sing 71 n n 
C1 O5 BOG sing 72 n n 
C1 H1 BOG sing 73 n n 
O1 C1' BOG sing 74 n n 
C2 O2 BOG sing 75 n n 
C2 C3 BOG sing 76 n n 
C2 H2 BOG sing 77 n n 
O2 HO2 BOG sing 78 n n 
C3 O3 BOG sing 79 n n 
C3 C4 BOG sing 80 n n 
C3 H3 BOG sing 81 n n 
O3 HO3 BOG sing 82 n n 
C4 O4 BOG sing 83 n n 
C4 C5 BOG sing 84 n n 
C4 H4 BOG sing 85 n n 
O4 HO4 BOG sing 86 n n 
C5 O5 BOG sing 87 n n 
C5 C6 BOG sing 88 n n 
C5 H5 BOG sing 89 n n 
C6 O6 BOG sing 90 n n 
C6 H61 BOG sing 91 n n 
C6 H62 BOG sing 92 n n 
O6 HO6 BOG sing 93 n n 
C1' C2' BOG sing 94 n n 
C1' "H1'1" BOG sing 95 n n 
C1' "H1'2" BOG sing 96 n n 
C2' C3' BOG sing 97 n n 
C2' "H2'1" BOG sing 98 n n 
C2' "H2'2" BOG sing 99 n n 
C3' C4' BOG sing 100 n n 
C3' "H3'1" BOG sing 101 n n 
C3' "H3'2" BOG sing 102 n n 
C4' C5' BOG sing 103 n n 
C4' "H4'1" BOG sing 104 n n 
C4' "H4'2" BOG sing 105 n n 
C5' C6' BOG sing 106 n n 
C5' "H5'1" BOG sing 107 n n 
C5' "H5'2" BOG sing 108 n n 
C6' C7' BOG sing 109 n n 
C6' "H6'1" BOG sing 110 n n 
C6' "H6'2" BOG sing 111 n n 
C7' C8' BOG sing 112 n n 
C7' "H7'1" BOG sing 113 n n 
C7' "H7'2" BOG sing 114 n n 
C8' "H8'1" BOG sing 115 n n 
C8' "H8'2" BOG sing 116 n n 
C8' "H8'3" BOG sing 117 n n 
#
_pdbx_chem_comp_identifier.comp_id            BOG 
_pdbx_chem_comp_identifier.identifier         b-octylglucoside 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     3M74 
_atom_sites.fract_transf_matrix[1][1]    0.010409 
_atom_sites.fract_transf_matrix[1][2]    0.00601 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012019 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007351 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 BOG A 1 315 315 BOG BOG . 
C 2 BOG A 1 316 316 BOG BOG . 
D 2 BOG A 1 317 317 BOG BOG . 
E 2 BOG A 1 318 318 BOG BOG . 
F 3 HOH A 1 319 319 HOH HOH . 
F 3 HOH A 2 320 320 HOH HOH . 
F 3 HOH A 3 321 321 HOH HOH . 
F 3 HOH A 4 322 322 HOH HOH . 
F 3 HOH A 5 323 323 HOH HOH . 
F 3 HOH A 6 324 324 HOH HOH . 
F 3 HOH A 7 325 325 HOH HOH . 
F 3 HOH A 8 326 326 HOH HOH . 
F 3 HOH A 9 327 327 HOH HOH . 
F 3 HOH A 10 328 328 HOH HOH . 
F 3 HOH A 11 329 329 HOH HOH . 
F 3 HOH A 12 330 330 HOH HOH . 
F 3 HOH A 13 331 331 HOH HOH . 
F 3 HOH A 14 332 332 HOH HOH . 
F 3 HOH A 15 333 333 HOH HOH . 
F 3 HOH A 16 334 334 HOH HOH . 
F 3 HOH A 17 335 335 HOH HOH . 
F 3 HOH A 18 336 336 HOH HOH . 
F 3 HOH A 19 337 337 HOH HOH . 
F 3 HOH A 20 338 338 HOH HOH . 
F 3 HOH A 21 339 339 HOH HOH . 
F 3 HOH A 22 340 340 HOH HOH . 
F 3 HOH A 23 341 341 HOH HOH . 
F 3 HOH A 24 342 342 HOH HOH . 
F 3 HOH A 25 343 343 HOH HOH . 
F 3 HOH A 26 344 344 HOH HOH . 
F 3 HOH A 27 345 345 HOH HOH . 
F 3 HOH A 28 346 346 HOH HOH . 
F 3 HOH A 29 347 347 HOH HOH . 
F 3 HOH A 30 348 348 HOH HOH . 
F 3 HOH A 31 349 349 HOH HOH . 
F 3 HOH A 32 350 350 HOH HOH . 
F 3 HOH A 33 351 351 HOH HOH . 
F 3 HOH A 34 352 352 HOH HOH . 
F 3 HOH A 35 353 353 HOH HOH . 
F 3 HOH A 36 354 354 HOH HOH . 
F 3 HOH A 37 355 355 HOH HOH . 
F 3 HOH A 38 356 356 HOH HOH . 
F 3 HOH A 39 357 357 HOH HOH . 
F 3 HOH A 40 358 358 HOH HOH . 
F 3 HOH A 41 359 359 HOH HOH . 
F 3 HOH A 42 360 360 HOH HOH . 
F 3 HOH A 43 361 361 HOH HOH . 
F 3 HOH A 44 362 362 HOH HOH . 
F 3 HOH A 45 363 363 HOH HOH . 
F 3 HOH A 46 364 364 HOH HOH . 
F 3 HOH A 47 365 365 HOH HOH . 
F 3 HOH A 48 366 366 HOH HOH . 
F 3 HOH A 49 367 367 HOH HOH . 
F 3 HOH A 50 368 368 HOH HOH . 
F 3 HOH A 51 369 369 HOH HOH . 
F 3 HOH A 52 370 370 HOH HOH . 
F 3 HOH A 53 371 371 HOH HOH . 
F 3 HOH A 54 372 372 HOH HOH . 
F 3 HOH A 55 373 373 HOH HOH . 
F 3 HOH A 56 374 374 HOH HOH . 
F 3 HOH A 57 375 375 HOH HOH . 
F 3 HOH A 58 376 376 HOH HOH . 
F 3 HOH A 59 377 377 HOH HOH . 
F 3 HOH A 60 378 378 HOH HOH . 
F 3 HOH A 61 379 379 HOH HOH . 
F 3 HOH A 62 380 380 HOH HOH . 
F 3 HOH A 63 381 381 HOH HOH . 
F 3 HOH A 64 382 382 HOH HOH . 
F 3 HOH A 65 383 383 HOH HOH . 
F 3 HOH A 66 384 384 HOH HOH . 
F 3 HOH A 67 385 385 HOH HOH . 
F 3 HOH A 68 386 386 HOH HOH . 
F 3 HOH A 69 387 387 HOH HOH . 
F 3 HOH A 70 388 388 HOH HOH . 
F 3 HOH A 71 389 389 HOH HOH . 
F 3 HOH A 72 390 390 HOH HOH . 
F 3 HOH A 73 391 391 HOH HOH . 
F 3 HOH A 74 392 392 HOH HOH . 
F 3 HOH A 75 393 393 HOH HOH . 
F 3 HOH A 76 394 394 HOH HOH . 
F 3 HOH A 77 395 395 HOH HOH . 
F 3 HOH A 78 396 396 HOH HOH . 
F 3 HOH A 79 397 397 HOH HOH . 
F 3 HOH A 80 398 398 HOH HOH . 
F 3 HOH A 81 399 399 HOH HOH . 
F 3 HOH A 82 400 400 HOH HOH . 
F 3 HOH A 83 401 401 HOH HOH . 
F 3 HOH A 84 402 402 HOH HOH . 
F 3 HOH A 85 403 403 HOH HOH . 
F 3 HOH A 86 404 404 HOH HOH . 
F 3 HOH A 87 405 405 HOH HOH . 
F 3 HOH A 88 406 406 HOH HOH . 
F 3 HOH A 89 407 407 HOH HOH . 
F 3 HOH A 90 408 408 HOH HOH . 
F 3 HOH A 91 409 409 HOH HOH . 
F 3 HOH A 92 411 411 HOH HOH . 
F 3 HOH A 93 412 412 HOH HOH . 
F 3 HOH A 94 413 413 HOH HOH . 
F 3 HOH A 95 414 414 HOH HOH . 
F 3 HOH A 96 415 415 HOH HOH . 
F 3 HOH A 97 416 416 HOH HOH . 
F 3 HOH A 98 417 417 HOH HOH . 
F 3 HOH A 99 418 418 HOH HOH . 
F 3 HOH A 100 419 419 HOH HOH . 
F 3 HOH A 101 420 420 HOH HOH . 
F 3 HOH A 102 421 421 HOH HOH . 
F 3 HOH A 103 422 422 HOH HOH . 
F 3 HOH A 104 423 423 HOH HOH . 
F 3 HOH A 105 424 424 HOH HOH . 
F 3 HOH A 106 425 425 HOH HOH . 
F 3 HOH A 107 426 426 HOH HOH . 
F 3 HOH A 108 427 427 HOH HOH . 
F 3 HOH A 109 428 428 HOH HOH . 
F 3 HOH A 110 429 429 HOH HOH . 
F 3 HOH A 111 430 430 HOH HOH . 
F 3 HOH A 112 431 431 HOH HOH . 
F 3 HOH A 113 432 432 HOH HOH . 
F 3 HOH A 114 433 433 HOH HOH . 
F 3 HOH A 115 434 434 HOH HOH . 
F 3 HOH A 116 435 435 HOH HOH . 
F 3 HOH A 117 436 436 HOH HOH . 
F 3 HOH A 118 437 437 HOH HOH . 
F 3 HOH A 119 438 438 HOH HOH . 
F 3 HOH A 120 439 439 HOH HOH . 
F 3 HOH A 121 440 440 HOH HOH . 
F 3 HOH A 122 441 441 HOH HOH . 
F 3 HOH A 123 442 442 HOH HOH . 
F 3 HOH A 124 443 443 HOH HOH . 
F 3 HOH A 125 444 444 HOH HOH . 
F 3 HOH A 126 445 445 HOH HOH . 
F 3 HOH A 127 446 446 HOH HOH . 
F 3 HOH A 128 447 447 HOH HOH . 
F 3 HOH A 129 448 448 HOH HOH . 
F 3 HOH A 130 449 449 HOH HOH . 
F 3 HOH A 131 450 450 HOH HOH . 
F 3 HOH A 132 451 451 HOH HOH . 
F 3 HOH A 133 452 452 HOH HOH . 
F 3 HOH A 134 453 453 HOH HOH . 
F 3 HOH A 135 454 454 HOH HOH . 
F 3 HOH A 136 455 455 HOH HOH . 
F 3 HOH A 137 456 456 HOH HOH . 
F 3 HOH A 138 457 457 HOH HOH . 
F 3 HOH A 139 458 458 HOH HOH . 
F 3 HOH A 140 459 459 HOH HOH . 
F 3 HOH A 141 460 460 HOH HOH . 
F 3 HOH A 142 461 461 HOH HOH . 
F 3 HOH A 143 462 462 HOH HOH . 
F 3 HOH A 144 463 463 HOH HOH . 
F 3 HOH A 145 464 464 HOH HOH . 
F 3 HOH A 146 465 465 HOH HOH . 
F 3 HOH A 147 466 466 HOH HOH . 
F 3 HOH A 148 467 467 HOH HOH . 
F 3 HOH A 149 468 468 HOH HOH . 
F 3 HOH A 150 469 469 HOH HOH . 
F 3 HOH A 151 470 470 HOH HOH . 
F 3 HOH A 152 471 471 HOH HOH . 
F 3 HOH A 153 472 472 HOH HOH . 
F 3 HOH A 154 473 473 HOH HOH . 
F 3 HOH A 155 475 475 HOH HOH . 
F 3 HOH A 156 476 476 HOH HOH . 
F 3 HOH A 157 477 477 HOH HOH . 
F 3 HOH A 158 478 478 HOH HOH . 
F 3 HOH A 159 479 479 HOH HOH . 
F 3 HOH A 160 480 480 HOH HOH . 
F 3 HOH A 161 481 481 HOH HOH . 
F 3 HOH A 162 482 482 HOH HOH . 
F 3 HOH A 163 483 483 HOH HOH . 
F 3 HOH A 164 484 484 HOH HOH . 
F 3 HOH A 165 485 485 HOH HOH . 
F 3 HOH A 166 486 486 HOH HOH . 
F 3 HOH A 167 487 487 HOH HOH . 
F 3 HOH A 168 488 488 HOH HOH . 
F 3 HOH A 169 489 489 HOH HOH . 
F 3 HOH A 170 490 490 HOH HOH . 
F 3 HOH A 171 491 491 HOH HOH . 
F 3 HOH A 172 492 492 HOH HOH . 
F 3 HOH A 173 493 493 HOH HOH . 
F 3 HOH A 174 494 494 HOH HOH . 
F 3 HOH A 175 495 495 HOH HOH . 
F 3 HOH A 176 496 496 HOH HOH . 
F 3 HOH A 177 497 497 HOH HOH . 
F 3 HOH A 178 498 498 HOH HOH . 
F 3 HOH A 179 499 499 HOH HOH . 
F 3 HOH A 180 500 500 HOH HOH . 
F 3 HOH A 181 501 501 HOH HOH . 
F 3 HOH A 182 502 502 HOH HOH . 
F 3 HOH A 183 503 503 HOH HOH . 
F 3 HOH A 184 504 504 HOH HOH . 
F 3 HOH A 185 505 505 HOH HOH . 
F 3 HOH A 186 506 506 HOH HOH . 
F 3 HOH A 187 507 507 HOH HOH . 
F 3 HOH A 188 508 508 HOH HOH . 
F 3 HOH A 189 509 509 HOH HOH . 
F 3 HOH A 190 510 510 HOH HOH . 
F 3 HOH A 191 511 511 HOH HOH . 
F 3 HOH A 192 512 512 HOH HOH . 
F 3 HOH A 193 513 513 HOH HOH . 
F 3 HOH A 194 514 514 HOH HOH . 
F 3 HOH A 195 515 515 HOH HOH . 
F 3 HOH A 196 516 516 HOH HOH . 
F 3 HOH A 197 517 517 HOH HOH . 
F 3 HOH A 198 518 518 HOH HOH . 
F 3 HOH A 199 519 519 HOH HOH . 
F 3 HOH A 200 520 520 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 BOG . . . B 2 24.417 -8.473 14.327 1 42.88 ? C1 BOG 315 A 1 
HETATM 2 O O1 BOG . . . B 2 23.688 -8.749 13.249 1 43.53 ? O1 BOG 315 A 1 
HETATM 3 C C2 BOG . . . B 2 24.93 -7.122 14.378 1 43.49 ? C2 BOG 315 A 1 
HETATM 4 O O2 BOG . . . B 2 25.737 -6.834 13.275 1 42.32 ? O2 BOG 315 A 1 
HETATM 5 C C3 BOG . . . B 2 25.658 -6.915 15.604 1 44.32 ? C3 BOG 315 A 1 
HETATM 6 O O3 BOG . . . B 2 25.983 -5.537 15.61 1 46.29 ? O3 BOG 315 A 1 
HETATM 7 C C4 BOG . . . B 2 24.88 -7.39 16.78 1 42.94 ? C4 BOG 315 A 1 
HETATM 8 O O4 BOG . . . B 2 25.616 -7.216 17.899 1 45.81 ? O4 BOG 315 A 1 
HETATM 9 C C5 BOG . . . B 2 24.64 -8.853 16.597 1 40.36 ? C5 BOG 315 A 1 
HETATM 10 O O5 BOG . . . B 2 23.723 -8.878 15.567 1 41.14 ? O5 BOG 315 A 1 
HETATM 11 C C6 BOG . . . B 2 24.173 -9.652 17.766 1 38.44 ? C6 BOG 315 A 1 
HETATM 12 O O6 BOG . . . B 2 23.31 -10.739 17.566 1 30.58 ? O6 BOG 315 A 1 
HETATM 13 C C1' BOG . . . B 2 23.187 -10.063 13.17 1 43.89 ? C1' BOG 315 A 1 
HETATM 14 C C2' BOG . . . B 2 23.197 -10.805 11.868 1 44.26 ? C2' BOG 315 A 1 
HETATM 15 C C3' BOG . . . B 2 23.988 -12.056 11.8 1 41.96 ? C3' BOG 315 A 1 
HETATM 16 C C4' BOG . . . B 2 23.65 -13.114 10.791 1 40.04 ? C4' BOG 315 A 1 
HETATM 17 C C5' BOG . . . B 2 24.669 -14.208 10.435 1 37.02 ? C5' BOG 315 A 1 
HETATM 18 C C6' BOG . . . B 2 24.756 -14.549 8.958 1 34.77 ? C6' BOG 315 A 1 
HETATM 19 C C7' BOG . . . B 2 26.076 -14.867 8.402 1 33.28 ? C7' BOG 315 A 1 
HETATM 20 C C8' BOG . . . B 2 26.457 -16.23 8.553 1 25.57 ? C8' BOG 315 A 1 
#
_model_server_stats.io_time_ms              21 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           251 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           20 
#