data_3M7P
#
_model_server_result.job_id            pvShBVpulirzslJdZLwonw 
_model_server_result.datetime_utc      '2025-03-05 18:58:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3m7p 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":955}' 
#
_entry.id    3M7P 
#
_exptl.entry_id    3M7P 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3M7P 
_cell.length_a            124.789 
_cell.length_b            124.789 
_cell.length_c            60.649 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3M7P 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 4_555 y,x,-z -0.5 0.866025 0 0.866025 0.5 0 0 0 -1 0 0 0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 12 A CYS 308 1_555 A SG CYS 39 A CYS 335 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? 
disulf ? disulf2 A SG CYS 37 A CYS 333 1_555 A SG CYS 46 A CYS 342 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.565 ? 
disulf ? disulf3 A SG CYS 64 A CYS 360 1_555 A SG CYS 90 A CYS 386 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? 
disulf ? disulf4 A SG CYS 78 A CYS 374 1_555 A SG CYS 105 A CYS 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
disulf ? disulf5 A SG CYS 124 A CYS 420 1_555 A SG CYS 150 A CYS 446 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
disulf ? disulf6 A SG CYS 138 A CYS 434 1_555 A SG CYS 165 A CYS 461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? 
disulf ? disulf7 A SG CYS 174 A CYS 470 1_555 A SG CYS 202 A CYS 498 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? 
disulf ? disulf8 A SG CYS 200 A CYS 496 1_555 A SG CYS 212 A CYS 508 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? 
disulf ? disulf9 A SG CYS 247 A CYS 543 1_555 A SG CYS 259 A CYS 555 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.739 ? 
disulf ? disulf10 A SG CYS 265 A CYS 561 1_555 A SG CYS 293 A CYS 589 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.254 ? 
disulf ? disulf11 A SG CYS 291 A CYS 587 1_555 A SG CYS 303 A CYS 599 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? 
covale ? covale1 A ND2 ASN 134 A ASN 430 1_555 B C1 NAG . A NAG 1430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.417 ? 
covale ? covale2 A ND2 ASN 232 A ASN 528 1_555 C C1 NAG . A NAG 1528 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.411 ? 
covale ? covale3 A ND2 ASN 246 A ASN 542 1_555 D C1 NAG . A NAG 1542 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.488 ? 
metalc ? metalc1 N O HOH . A HOH 10 1_555 I ZN ZN . A ZN 958 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? 
metalc ? metalc2 N O HOH . A HOH 13 1_555 G ZN ZN . A ZN 956 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? 
metalc ? metalc3 N O HOH . A HOH 34 1_555 F ZN ZN . A ZN 954 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? 
metalc ? metalc4 N O HOH . A HOH 36 1_555 K ZN ZN . A ZN 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? 
metalc ? metalc5 N O HOH . A HOH 37 1_555 K ZN ZN . A ZN 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.834 ? 
metalc ? metalc6 N O HOH . A HOH 38 1_555 K ZN ZN . A ZN 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.131 ? 
metalc ? metalc7 N O HOH . A HOH 39 1_555 K ZN ZN . A ZN 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc8 N O HOH . A HOH 40 1_555 K ZN ZN . A ZN 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.194 ? 
metalc ? metalc9 A ND1 HIS 3 A HIS 299 1_555 I ZN ZN . A ZN 958 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? 
metalc ? metalc10 A ND1 HIS 11 A HIS 307 1_555 I ZN ZN . A ZN 958 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
metalc ? metalc11 A NE2 HIS 87 A HIS 383 1_555 G ZN ZN . A ZN 956 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.973 ? 
metalc ? metalc12 A NE2 HIS 170 A HIS 466 1_555 H ZN ZN . A ZN 957 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.914 ? 
metalc ? metalc13 A OE1 GLU 171 A GLU 467 1_555 E ZN ZN . A ZN 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
metalc ? metalc14 A OE2 GLU 171 A GLU 467 1_555 E ZN ZN . A ZN 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.57 ? 
metalc ? metalc15 A OE1 GLU 172 A GLU 468 1_555 H ZN ZN . A ZN 957 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc16 A OE2 GLU 178 A GLU 474 1_555 J ZN ZN . A ZN 959 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc17 A NE2 HIS 192 A HIS 488 1_555 J ZN ZN . A ZN 959 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.97 ? 
metalc ? metalc18 A OD1 ASP 233 A ASP 529 1_555 E ZN ZN . A ZN 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.889 ? 
metalc ? metalc19 A ND1 HIS 236 A HIS 532 1_555 E ZN ZN . A ZN 953 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
metalc ? metalc20 A NE2 HIS 239 A HIS 535 1_555 F ZN ZN . A ZN 954 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? 
metalc ? metalc21 A OE2 GLU 241 A GLU 537 1_555 K ZN ZN . A ZN 955 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? 
metalc ? metalc22 A NE2 HIS 285 A HIS 581 1_555 J ZN ZN . A ZN 959 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.109 ? 
metalc ? metalc23 A ND1 HIS 302 A HIS 598 1_555 F ZN ZN . A ZN 954 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3M7P 
_atom_sites.fract_transf_matrix[1][1]    0.008014 
_atom_sites.fract_transf_matrix[1][2]    0.004627 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009253 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016488 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAG A 1 1430 1430 NAG NAG . 
C 2 NAG A 1 1528 1528 NAG NAG . 
D 2 NAG A 1 1542 1542 NAG NAG . 
E 3 ZN A 1 953 953 ZN ZN . 
F 3 ZN A 1 954 954 ZN ZN . 
G 3 ZN A 1 956 956 ZN ZN . 
H 3 ZN A 1 957 957 ZN ZN . 
I 3 ZN A 1 958 958 ZN ZN . 
J 3 ZN A 1 959 959 ZN ZN . 
K 3 ZN A 1 955 955 ZN ZN . 
L 4 12P A 1 189 189 12P 12P . 
M 4 12P A 1 190 190 12P 12P . 
N 5 HOH A 1 1 1 HOH HOH . 
N 5 HOH A 2 2 2 HOH HOH . 
N 5 HOH A 3 3 3 HOH HOH . 
N 5 HOH A 4 4 4 HOH HOH . 
N 5 HOH A 5 5 5 HOH HOH . 
N 5 HOH A 6 6 6 HOH HOH . 
N 5 HOH A 7 7 7 HOH HOH . 
N 5 HOH A 8 8 8 HOH HOH . 
N 5 HOH A 9 9 9 HOH HOH . 
N 5 HOH A 10 10 10 HOH HOH . 
N 5 HOH A 11 11 11 HOH HOH . 
N 5 HOH A 12 12 12 HOH HOH . 
N 5 HOH A 13 13 13 HOH HOH . 
N 5 HOH A 14 14 14 HOH HOH . 
N 5 HOH A 15 15 15 HOH HOH . 
N 5 HOH A 16 16 16 HOH HOH . 
N 5 HOH A 17 17 17 HOH HOH . 
N 5 HOH A 18 18 18 HOH HOH . 
N 5 HOH A 19 20 20 HOH HOH . 
N 5 HOH A 20 21 21 HOH HOH . 
N 5 HOH A 21 23 23 HOH HOH . 
N 5 HOH A 22 26 26 HOH HOH . 
N 5 HOH A 23 27 27 HOH HOH . 
N 5 HOH A 24 28 28 HOH HOH . 
N 5 HOH A 25 30 30 HOH HOH . 
N 5 HOH A 26 31 31 HOH HOH . 
N 5 HOH A 27 32 32 HOH HOH . 
N 5 HOH A 28 33 33 HOH HOH . 
N 5 HOH A 29 34 34 HOH HOH . 
N 5 HOH A 30 35 35 HOH HOH . 
N 5 HOH A 31 36 36 HOH HOH . 
N 5 HOH A 32 37 37 HOH HOH . 
N 5 HOH A 33 38 38 HOH HOH . 
N 5 HOH A 34 39 39 HOH HOH . 
N 5 HOH A 35 40 40 HOH HOH . 
N 5 HOH A 36 41 41 HOH HOH . 
N 5 HOH A 37 42 42 HOH HOH . 
N 5 HOH A 38 43 43 HOH HOH . 
N 5 HOH A 39 44 44 HOH HOH . 
N 5 HOH A 40 45 45 HOH HOH . 
N 5 HOH A 41 46 46 HOH HOH . 
N 5 HOH A 42 48 48 HOH HOH . 
N 5 HOH A 43 49 49 HOH HOH . 
N 5 HOH A 44 50 50 HOH HOH . 
N 5 HOH A 45 51 51 HOH HOH . 
N 5 HOH A 46 52 52 HOH HOH . 
N 5 HOH A 47 53 53 HOH HOH . 
N 5 HOH A 48 54 54 HOH HOH . 
N 5 HOH A 49 55 55 HOH HOH . 
N 5 HOH A 50 56 56 HOH HOH . 
N 5 HOH A 51 57 57 HOH HOH . 
N 5 HOH A 52 58 58 HOH HOH . 
N 5 HOH A 53 59 59 HOH HOH . 
N 5 HOH A 54 60 60 HOH HOH . 
N 5 HOH A 55 61 61 HOH HOH . 
N 5 HOH A 56 62 62 HOH HOH . 
N 5 HOH A 57 63 63 HOH HOH . 
N 5 HOH A 58 64 64 HOH HOH . 
N 5 HOH A 59 65 65 HOH HOH . 
N 5 HOH A 60 66 66 HOH HOH . 
N 5 HOH A 61 67 67 HOH HOH . 
N 5 HOH A 62 68 68 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         K 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               29.497 
_atom_site.Cartn_y               44.336 
_atom_site.Cartn_z               -6.376 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        45.48 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           955 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#