data_3M7S # _model_server_result.job_id s2XnTCmxXh6bGvCg1K15MQ _model_server_result.datetime_utc '2024-11-28 00:51:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3m7s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":275}' # _entry.id 3M7S # _exptl.entry_id 3M7S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102 _cell.angle_gamma 90 _cell.entry_id 3M7S _cell.length_a 42.8 _cell.length_b 65.4 _cell.length_c 49.42 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3M7S _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.details ? _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_1 BGC _pdbx_entity_branch_link.comp_id_2 BGC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.atom_stereo_config_1 . _pdbx_entity_branch_link.atom_id_2 O4 _pdbx_entity_branch_link.leaving_atom_id_2 HO4 _pdbx_entity_branch_link.atom_stereo_config_2 . _pdbx_entity_branch_link.value_order sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B BGC 1 B 1 BGC A 274 CBI 2 n B BGC 2 B 2 BGC A 274 CBI # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 A CYS 22 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf2 A SG CYS 157 A CYS 157 1_555 A SG CYS 186 A CYS 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? covale ? covale1 B O4 BGC . B BGC 1 1_555 B C1 BGC . B BGC 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.404 sing # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3M7S _atom_sites.fract_transf_matrix[1][1] 0.023364 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004966 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015291 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.020687 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PO4 A 1 273 273 PO4 PO4 . D 4 ACT A 1 275 275 ACT ACT . E 5 HOH A 1 276 276 HOH HOH . E 5 HOH A 2 277 277 HOH HOH . E 5 HOH A 3 278 278 HOH HOH . E 5 HOH A 4 279 279 HOH HOH . E 5 HOH A 5 280 280 HOH HOH . E 5 HOH A 6 281 281 HOH HOH . E 5 HOH A 7 282 282 HOH HOH . E 5 HOH A 8 283 283 HOH HOH . E 5 HOH A 9 284 284 HOH HOH . E 5 HOH A 10 285 285 HOH HOH . E 5 HOH A 11 286 286 HOH HOH . E 5 HOH A 12 287 287 HOH HOH . E 5 HOH A 13 288 288 HOH HOH . E 5 HOH A 14 289 289 HOH HOH . E 5 HOH A 15 290 290 HOH HOH . E 5 HOH A 16 291 291 HOH HOH . E 5 HOH A 17 292 292 HOH HOH . E 5 HOH A 18 293 293 HOH HOH . E 5 HOH A 19 294 294 HOH HOH . E 5 HOH A 20 295 295 HOH HOH . E 5 HOH A 21 296 296 HOH HOH . E 5 HOH A 22 297 297 HOH HOH . E 5 HOH A 23 298 298 HOH HOH . E 5 HOH A 24 299 299 HOH HOH . E 5 HOH A 25 300 300 HOH HOH . E 5 HOH A 26 301 301 HOH HOH . E 5 HOH A 27 302 302 HOH HOH . E 5 HOH A 28 303 303 HOH HOH . E 5 HOH A 29 304 304 HOH HOH . E 5 HOH A 30 305 305 HOH HOH . E 5 HOH A 31 306 306 HOH HOH . E 5 HOH A 32 307 307 HOH HOH . E 5 HOH A 33 308 308 HOH HOH . E 5 HOH A 34 309 309 HOH HOH . E 5 HOH A 35 310 310 HOH HOH . E 5 HOH A 36 311 311 HOH HOH . E 5 HOH A 37 312 312 HOH HOH . E 5 HOH A 38 313 313 HOH HOH . E 5 HOH A 39 314 314 HOH HOH . E 5 HOH A 40 315 315 HOH HOH . E 5 HOH A 41 316 316 HOH HOH . E 5 HOH A 42 317 317 HOH HOH . E 5 HOH A 43 318 318 HOH HOH . E 5 HOH A 44 319 319 HOH HOH . E 5 HOH A 45 320 320 HOH HOH . E 5 HOH A 46 321 321 HOH HOH . E 5 HOH A 47 322 322 HOH HOH . E 5 HOH A 48 323 323 HOH HOH . E 5 HOH A 49 324 324 HOH HOH . E 5 HOH A 50 325 325 HOH HOH . E 5 HOH A 51 326 326 HOH HOH . E 5 HOH A 52 327 327 HOH HOH . E 5 HOH A 53 328 328 HOH HOH . E 5 HOH A 54 329 329 HOH HOH . E 5 HOH A 55 330 330 HOH HOH . E 5 HOH A 56 331 331 HOH HOH . E 5 HOH A 57 332 332 HOH HOH . E 5 HOH A 58 333 333 HOH HOH . E 5 HOH A 59 334 334 HOH HOH . E 5 HOH A 60 335 335 HOH HOH . E 5 HOH A 61 336 336 HOH HOH . E 5 HOH A 62 337 337 HOH HOH . E 5 HOH A 63 338 338 HOH HOH . E 5 HOH A 64 339 339 HOH HOH . E 5 HOH A 65 340 340 HOH HOH . E 5 HOH A 66 341 341 HOH HOH . E 5 HOH A 67 342 342 HOH HOH . E 5 HOH A 68 344 344 HOH HOH . E 5 HOH A 69 345 345 HOH HOH . E 5 HOH A 70 346 346 HOH HOH . E 5 HOH A 71 347 347 HOH HOH . E 5 HOH A 72 348 348 HOH HOH . E 5 HOH A 73 349 349 HOH HOH . E 5 HOH A 74 350 350 HOH HOH . E 5 HOH A 75 351 351 HOH HOH . E 5 HOH A 76 352 352 HOH HOH . E 5 HOH A 77 353 353 HOH HOH . E 5 HOH A 78 354 354 HOH HOH . E 5 HOH A 79 355 355 HOH HOH . E 5 HOH A 80 356 356 HOH HOH . E 5 HOH A 81 357 357 HOH HOH . E 5 HOH A 82 358 358 HOH HOH . E 5 HOH A 83 359 359 HOH HOH . E 5 HOH A 84 360 360 HOH HOH . E 5 HOH A 85 361 361 HOH HOH . E 5 HOH A 86 362 362 HOH HOH . E 5 HOH A 87 363 363 HOH HOH . E 5 HOH A 88 364 364 HOH HOH . E 5 HOH A 89 365 365 HOH HOH . E 5 HOH A 90 366 366 HOH HOH . E 5 HOH A 91 367 367 HOH HOH . E 5 HOH A 92 369 369 HOH HOH . E 5 HOH A 93 370 370 HOH HOH . E 5 HOH A 94 371 371 HOH HOH . E 5 HOH A 95 372 372 HOH HOH . E 5 HOH A 96 373 373 HOH HOH . E 5 HOH A 97 374 374 HOH HOH . E 5 HOH A 98 375 375 HOH HOH . E 5 HOH A 99 376 376 HOH HOH . E 5 HOH A 100 377 377 HOH HOH . E 5 HOH A 101 378 378 HOH HOH . E 5 HOH A 102 379 379 HOH HOH . E 5 HOH A 103 380 380 HOH HOH . E 5 HOH A 104 381 381 HOH HOH . E 5 HOH A 105 382 382 HOH HOH . E 5 HOH A 106 383 383 HOH HOH . E 5 HOH A 107 384 384 HOH HOH . E 5 HOH A 108 385 385 HOH HOH . E 5 HOH A 109 386 386 HOH HOH . E 5 HOH A 110 387 387 HOH HOH . E 5 HOH A 111 388 388 HOH HOH . E 5 HOH A 112 389 389 HOH HOH . E 5 HOH A 113 390 390 HOH HOH . E 5 HOH A 114 391 391 HOH HOH . E 5 HOH A 115 392 392 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 4 6.738 11.326 28.502 1 50.85 ? C ACT 275 A 1 HETATM 2 O O ACT . . . D 4 5.54 11.646 28.41 1 50.48 ? O ACT 275 A 1 HETATM 3 O OXT ACT . . . D 4 7.129 10.571 29.412 1 51.05 ? OXT ACT 275 A 1 HETATM 4 C CH3 ACT . . . D 4 7.72 11.879 27.498 1 49.49 ? CH3 ACT 275 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 373 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #