data_3M97 # _model_server_result.job_id TIdSlJkGClCDeipVdTb7pg _model_server_result.datetime_utc '2025-03-05 02:38:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3m97 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":142}' # _entry.id 3M97 # _exptl.entry_id 3M97 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3M97 _cell.length_a 37.376 _cell.length_b 38.991 _cell.length_c 93.014 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3M97 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 58 X HIS 58 1_555 B FE HEC . X HEC 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.965 ? metalc ? metalc2 A NE2 HIS 69 X HIS 69 1_555 C ZN ZN . X ZN 142 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc3 A OD2 ASP 82 X ASP 82 1_555 D ZN ZN . X ZN 143 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.86 ? metalc ? metalc4 A OD1 ASP 88 X ASP 88 1_555 E ZN ZN . X ZN 144 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc5 A NE2 HIS 93 X HIS 93 1_555 F ZN ZN . X ZN 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? metalc ? metalc6 A SD MET 118 X MET 118 1_555 B FE HEC . X HEC 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc7 C ZN ZN . X ZN 142 1_555 G O HOH . X HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc8 C ZN ZN . X ZN 142 1_555 G O HOH . X HOH 334 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc9 F ZN ZN . X ZN 145 1_555 G O HOH . X HOH 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3M97 _atom_sites.fract_transf_matrix[1][1] 0.026755 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010751 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEC X 1 141 141 HEC HEC . C 3 ZN X 1 142 5 ZN ZN . D 3 ZN X 1 143 6 ZN ZN . E 3 ZN X 1 144 7 ZN ZN . F 3 ZN X 1 145 8 ZN ZN . G 4 HOH X 1 146 146 HOH HOH . G 4 HOH X 2 147 147 HOH HOH . G 4 HOH X 3 148 148 HOH HOH . G 4 HOH X 4 149 149 HOH HOH . G 4 HOH X 5 150 150 HOH HOH . G 4 HOH X 6 151 151 HOH HOH . G 4 HOH X 7 152 152 HOH HOH . G 4 HOH X 8 153 153 HOH HOH . G 4 HOH X 9 154 154 HOH HOH . G 4 HOH X 10 155 155 HOH HOH . G 4 HOH X 11 156 156 HOH HOH . G 4 HOH X 12 157 157 HOH HOH . G 4 HOH X 13 158 158 HOH HOH . G 4 HOH X 14 159 159 HOH HOH . G 4 HOH X 15 160 160 HOH HOH . G 4 HOH X 16 161 161 HOH HOH . G 4 HOH X 17 162 162 HOH HOH . G 4 HOH X 18 163 163 HOH HOH . G 4 HOH X 19 164 164 HOH HOH . G 4 HOH X 20 165 165 HOH HOH . G 4 HOH X 21 166 166 HOH HOH . G 4 HOH X 22 167 167 HOH HOH . G 4 HOH X 23 168 168 HOH HOH . G 4 HOH X 24 169 169 HOH HOH . G 4 HOH X 25 170 170 HOH HOH . G 4 HOH X 26 171 171 HOH HOH . G 4 HOH X 27 172 172 HOH HOH . G 4 HOH X 28 173 173 HOH HOH . G 4 HOH X 29 174 174 HOH HOH . G 4 HOH X 30 175 175 HOH HOH . G 4 HOH X 31 176 176 HOH HOH . G 4 HOH X 32 177 177 HOH HOH . G 4 HOH X 33 178 178 HOH HOH . G 4 HOH X 34 179 179 HOH HOH . G 4 HOH X 35 180 180 HOH HOH . G 4 HOH X 36 181 181 HOH HOH . G 4 HOH X 37 182 182 HOH HOH . G 4 HOH X 38 183 183 HOH HOH . G 4 HOH X 39 184 184 HOH HOH . G 4 HOH X 40 185 185 HOH HOH . G 4 HOH X 41 186 186 HOH HOH . G 4 HOH X 42 187 187 HOH HOH . G 4 HOH X 43 188 188 HOH HOH . G 4 HOH X 44 189 189 HOH HOH . G 4 HOH X 45 190 190 HOH HOH . G 4 HOH X 46 191 191 HOH HOH . G 4 HOH X 47 192 192 HOH HOH . G 4 HOH X 48 193 193 HOH HOH . G 4 HOH X 49 194 194 HOH HOH . G 4 HOH X 50 195 195 HOH HOH . G 4 HOH X 51 196 196 HOH HOH . G 4 HOH X 52 197 197 HOH HOH . G 4 HOH X 53 198 198 HOH HOH . G 4 HOH X 54 199 199 HOH HOH . G 4 HOH X 55 200 200 HOH HOH . G 4 HOH X 56 201 201 HOH HOH . G 4 HOH X 57 202 202 HOH HOH . G 4 HOH X 58 203 203 HOH HOH . G 4 HOH X 59 204 204 HOH HOH . G 4 HOH X 60 205 205 HOH HOH . G 4 HOH X 61 206 206 HOH HOH . G 4 HOH X 62 207 207 HOH HOH . G 4 HOH X 63 208 208 HOH HOH . G 4 HOH X 64 209 209 HOH HOH . G 4 HOH X 65 210 210 HOH HOH . G 4 HOH X 66 211 211 HOH HOH . G 4 HOH X 67 212 212 HOH HOH . G 4 HOH X 68 213 213 HOH HOH . G 4 HOH X 69 214 214 HOH HOH . G 4 HOH X 70 215 215 HOH HOH . G 4 HOH X 71 216 216 HOH HOH . G 4 HOH X 72 217 217 HOH HOH . G 4 HOH X 73 218 218 HOH HOH . G 4 HOH X 74 219 219 HOH HOH . G 4 HOH X 75 220 220 HOH HOH . G 4 HOH X 76 221 221 HOH HOH . G 4 HOH X 77 222 222 HOH HOH . G 4 HOH X 78 223 223 HOH HOH . G 4 HOH X 79 224 224 HOH HOH . G 4 HOH X 80 225 225 HOH HOH . G 4 HOH X 81 226 226 HOH HOH . G 4 HOH X 82 227 227 HOH HOH . G 4 HOH X 83 228 1 HOH HOH . G 4 HOH X 84 229 2 HOH HOH . G 4 HOH X 85 230 3 HOH HOH . G 4 HOH X 86 231 4 HOH HOH . G 4 HOH X 87 232 5 HOH HOH . G 4 HOH X 88 233 6 HOH HOH . G 4 HOH X 89 234 7 HOH HOH . G 4 HOH X 90 235 8 HOH HOH . G 4 HOH X 91 236 9 HOH HOH . G 4 HOH X 92 237 10 HOH HOH . G 4 HOH X 93 238 11 HOH HOH . G 4 HOH X 94 239 12 HOH HOH . G 4 HOH X 95 240 13 HOH HOH . G 4 HOH X 96 241 14 HOH HOH . G 4 HOH X 97 242 15 HOH HOH . G 4 HOH X 98 243 16 HOH HOH . G 4 HOH X 99 244 17 HOH HOH . G 4 HOH X 100 245 18 HOH HOH . G 4 HOH X 101 246 19 HOH HOH . G 4 HOH X 102 247 20 HOH HOH . G 4 HOH X 103 248 21 HOH HOH . G 4 HOH X 104 249 22 HOH HOH . G 4 HOH X 105 250 23 HOH HOH . G 4 HOH X 106 251 24 HOH HOH . G 4 HOH X 107 252 25 HOH HOH . G 4 HOH X 108 253 26 HOH HOH . G 4 HOH X 109 254 27 HOH HOH . G 4 HOH X 110 255 28 HOH HOH . G 4 HOH X 111 256 29 HOH HOH . G 4 HOH X 112 257 30 HOH HOH . G 4 HOH X 113 258 31 HOH HOH . G 4 HOH X 114 259 32 HOH HOH . G 4 HOH X 115 260 33 HOH HOH . G 4 HOH X 116 261 34 HOH HOH . G 4 HOH X 117 262 35 HOH HOH . G 4 HOH X 118 263 36 HOH HOH . G 4 HOH X 119 264 37 HOH HOH . G 4 HOH X 120 265 38 HOH HOH . G 4 HOH X 121 266 39 HOH HOH . G 4 HOH X 122 267 40 HOH HOH . G 4 HOH X 123 268 41 HOH HOH . G 4 HOH X 124 269 42 HOH HOH . G 4 HOH X 125 270 43 HOH HOH . G 4 HOH X 126 271 44 HOH HOH . G 4 HOH X 127 272 45 HOH HOH . G 4 HOH X 128 273 46 HOH HOH . G 4 HOH X 129 274 47 HOH HOH . G 4 HOH X 130 275 48 HOH HOH . G 4 HOH X 131 276 49 HOH HOH . G 4 HOH X 132 277 50 HOH HOH . G 4 HOH X 133 278 51 HOH HOH . G 4 HOH X 134 279 52 HOH HOH . G 4 HOH X 135 280 53 HOH HOH . G 4 HOH X 136 281 54 HOH HOH . G 4 HOH X 137 282 55 HOH HOH . G 4 HOH X 138 283 56 HOH HOH . G 4 HOH X 139 284 57 HOH HOH . G 4 HOH X 140 285 58 HOH HOH . G 4 HOH X 141 286 59 HOH HOH . G 4 HOH X 142 287 60 HOH HOH . G 4 HOH X 143 288 61 HOH HOH . G 4 HOH X 144 289 62 HOH HOH . G 4 HOH X 145 290 63 HOH HOH . G 4 HOH X 146 291 64 HOH HOH . G 4 HOH X 147 292 65 HOH HOH . G 4 HOH X 148 293 66 HOH HOH . G 4 HOH X 149 294 67 HOH HOH . G 4 HOH X 150 295 68 HOH HOH . G 4 HOH X 151 296 69 HOH HOH . G 4 HOH X 152 297 70 HOH HOH . G 4 HOH X 153 298 71 HOH HOH . G 4 HOH X 154 299 72 HOH HOH . G 4 HOH X 155 300 73 HOH HOH . G 4 HOH X 156 301 74 HOH HOH . G 4 HOH X 157 302 75 HOH HOH . G 4 HOH X 158 303 76 HOH HOH . G 4 HOH X 159 304 77 HOH HOH . G 4 HOH X 160 305 78 HOH HOH . G 4 HOH X 161 306 79 HOH HOH . G 4 HOH X 162 307 80 HOH HOH . G 4 HOH X 163 308 81 HOH HOH . G 4 HOH X 164 309 82 HOH HOH . G 4 HOH X 165 310 83 HOH HOH . G 4 HOH X 166 311 84 HOH HOH . G 4 HOH X 167 312 85 HOH HOH . G 4 HOH X 168 313 86 HOH HOH . G 4 HOH X 169 314 87 HOH HOH . G 4 HOH X 170 315 88 HOH HOH . G 4 HOH X 171 316 89 HOH HOH . G 4 HOH X 172 317 90 HOH HOH . G 4 HOH X 173 318 91 HOH HOH . G 4 HOH X 174 319 92 HOH HOH . G 4 HOH X 175 320 93 HOH HOH . G 4 HOH X 176 321 94 HOH HOH . G 4 HOH X 177 322 95 HOH HOH . G 4 HOH X 178 323 96 HOH HOH . G 4 HOH X 179 324 97 HOH HOH . G 4 HOH X 180 325 98 HOH HOH . G 4 HOH X 181 326 99 HOH HOH . G 4 HOH X 182 327 100 HOH HOH . G 4 HOH X 183 328 101 HOH HOH . G 4 HOH X 184 329 102 HOH HOH . G 4 HOH X 185 330 103 HOH HOH . G 4 HOH X 186 331 104 HOH HOH . G 4 HOH X 187 332 105 HOH HOH . G 4 HOH X 188 333 106 HOH HOH . G 4 HOH X 189 334 107 HOH HOH . G 4 HOH X 190 335 108 HOH HOH . G 4 HOH X 191 336 109 HOH HOH . G 4 HOH X 192 337 110 HOH HOH . G 4 HOH X 193 338 111 HOH HOH . G 4 HOH X 194 339 112 HOH HOH . G 4 HOH X 195 340 113 HOH HOH . G 4 HOH X 196 341 114 HOH HOH . G 4 HOH X 197 342 115 HOH HOH . G 4 HOH X 198 343 116 HOH HOH . G 4 HOH X 199 344 117 HOH HOH . G 4 HOH X 200 345 118 HOH HOH . G 4 HOH X 201 346 119 HOH HOH . G 4 HOH X 202 347 120 HOH HOH . G 4 HOH X 203 348 121 HOH HOH . G 4 HOH X 204 349 122 HOH HOH . G 4 HOH X 205 350 123 HOH HOH . G 4 HOH X 206 351 124 HOH HOH . G 4 HOH X 207 352 125 HOH HOH . G 4 HOH X 208 353 126 HOH HOH . G 4 HOH X 209 354 127 HOH HOH . G 4 HOH X 210 355 128 HOH HOH . G 4 HOH X 211 356 129 HOH HOH . G 4 HOH X 212 357 130 HOH HOH . G 4 HOH X 213 358 131 HOH HOH . G 4 HOH X 214 359 132 HOH HOH . G 4 HOH X 215 360 133 HOH HOH . G 4 HOH X 216 361 134 HOH HOH . G 4 HOH X 217 362 135 HOH HOH . G 4 HOH X 218 363 136 HOH HOH . G 4 HOH X 219 364 137 HOH HOH . G 4 HOH X 220 365 138 HOH HOH . G 4 HOH X 221 366 139 HOH HOH . G 4 HOH X 222 367 140 HOH HOH . G 4 HOH X 223 368 141 HOH HOH . G 4 HOH X 224 369 142 HOH HOH . G 4 HOH X 225 370 143 HOH HOH . G 4 HOH X 226 371 144 HOH HOH . G 4 HOH X 227 372 145 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -16.249 _atom_site.Cartn_y -8.26 _atom_site.Cartn_z 18.138 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.58 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 142 _atom_site.auth_asym_id X _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #