data_3MA8 # _model_server_result.job_id UhkAKY20GngVLCmVH4vB-A _model_server_result.datetime_utc '2025-02-18 09:43:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ma8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":535}' # _entry.id 3MA8 # _exptl.entry_id 3MA8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MA8 _cell.length_a 119.345 _cell.length_b 97.142 _cell.length_c 109.31 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MA8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_455 -x-1,-y,z -1 0 0 0 -1 0 0 0 1 -119.345 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 3MA8 _atom_sites.fract_transf_matrix[1][1] 0.008379 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010294 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009148 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 535 1 CIT CIT . D 3 SO4 A 1 536 1 SO4 SO4 . E 2 CIT B 1 535 1 CIT CIT . F 3 SO4 B 1 536 2 SO4 SO4 . G 4 HOH A 1 537 2 HOH HOH . G 4 HOH A 2 538 10 HOH HOH . G 4 HOH A 3 539 22 HOH HOH . G 4 HOH A 4 540 31 HOH HOH . G 4 HOH A 5 541 33 HOH HOH . G 4 HOH A 6 542 35 HOH HOH . G 4 HOH A 7 543 51 HOH HOH . G 4 HOH A 8 544 57 HOH HOH . G 4 HOH A 9 545 58 HOH HOH . G 4 HOH A 10 546 63 HOH HOH . G 4 HOH A 11 547 67 HOH HOH . G 4 HOH A 12 548 69 HOH HOH . G 4 HOH A 13 549 70 HOH HOH . G 4 HOH A 14 550 71 HOH HOH . H 4 HOH B 1 537 1 HOH HOH . H 4 HOH B 2 538 3 HOH HOH . H 4 HOH B 3 539 4 HOH HOH . H 4 HOH B 4 540 6 HOH HOH . H 4 HOH B 5 541 7 HOH HOH . H 4 HOH B 6 542 11 HOH HOH . H 4 HOH B 7 543 12 HOH HOH . H 4 HOH B 8 544 13 HOH HOH . H 4 HOH B 9 545 14 HOH HOH . H 4 HOH B 10 546 16 HOH HOH . H 4 HOH B 11 547 18 HOH HOH . H 4 HOH B 12 548 20 HOH HOH . H 4 HOH B 13 549 21 HOH HOH . H 4 HOH B 14 550 23 HOH HOH . H 4 HOH B 15 551 25 HOH HOH . H 4 HOH B 16 552 28 HOH HOH . H 4 HOH B 17 553 30 HOH HOH . H 4 HOH B 18 554 32 HOH HOH . H 4 HOH B 19 555 34 HOH HOH . H 4 HOH B 20 556 37 HOH HOH . H 4 HOH B 21 557 38 HOH HOH . H 4 HOH B 22 558 39 HOH HOH . H 4 HOH B 23 559 40 HOH HOH . H 4 HOH B 24 560 41 HOH HOH . H 4 HOH B 25 561 42 HOH HOH . H 4 HOH B 26 562 43 HOH HOH . H 4 HOH B 27 563 44 HOH HOH . H 4 HOH B 28 564 45 HOH HOH . H 4 HOH B 29 565 46 HOH HOH . H 4 HOH B 30 566 47 HOH HOH . H 4 HOH B 31 567 53 HOH HOH . H 4 HOH B 32 568 54 HOH HOH . H 4 HOH B 33 569 56 HOH HOH . H 4 HOH B 34 570 59 HOH HOH . H 4 HOH B 35 571 60 HOH HOH . H 4 HOH B 36 572 61 HOH HOH . H 4 HOH B 37 573 62 HOH HOH . H 4 HOH B 38 574 64 HOH HOH . H 4 HOH B 39 575 65 HOH HOH . H 4 HOH B 40 576 66 HOH HOH . H 4 HOH B 41 577 68 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . E 2 -25.002 23.529 -38.438 1 65.11 ? C1 CIT 535 B 1 HETATM 2 O O1 CIT . . . E 2 -24.537 22.753 -37.577 1 65.6 ? O1 CIT 535 B 1 HETATM 3 O O2 CIT . . . E 2 -24.244 23.975 -39.326 1 65.65 ? O2 CIT 535 B 1 HETATM 4 C C2 CIT . . . E 2 -26.455 23.942 -38.395 1 64.75 ? C2 CIT 535 B 1 HETATM 5 C C3 CIT . . . E 2 -27.39 22.978 -39.131 1 64.32 ? C3 CIT 535 B 1 HETATM 6 O O7 CIT . . . E 2 -28.608 23.709 -39.439 1 64.35 ? O7 CIT 535 B 1 HETATM 7 C C4 CIT . . . E 2 -27.717 21.749 -38.278 1 63.77 ? C4 CIT 535 B 1 HETATM 8 C C5 CIT . . . E 2 -28.824 21.988 -37.28 1 63.19 ? C5 CIT 535 B 1 HETATM 9 O O3 CIT . . . E 2 -29.426 21.009 -36.798 1 63.04 ? O3 CIT 535 B 1 HETATM 10 O O4 CIT . . . E 2 -29.155 23.136 -36.914 1 62.68 ? O4 CIT 535 B 1 HETATM 11 C C6 CIT . . . E 2 -26.776 22.509 -40.444 1 64.14 ? C6 CIT 535 B 1 HETATM 12 O O5 CIT . . . E 2 -26.217 21.393 -40.539 1 63.79 ? O5 CIT 535 B 1 HETATM 13 O O6 CIT . . . E 2 -26.828 23.239 -41.457 1 64.24 ? O6 CIT 535 B 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 84 _model_server_stats.query_time_ms 651 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 13 #