data_3MAS # _model_server_result.job_id KwWuuBTWrRiFIc84ARKZFA _model_server_result.datetime_utc '2024-11-28 12:28:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mas # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":424}' # _entry.id 3MAS # _exptl.entry_id 3MAS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOCITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MAS _cell.length_a 83.136 _cell.length_b 83.136 _cell.length_c 308.508 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MAS _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id ICT _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOCITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 ICT doub 150 n n C1 O2 ICT sing 151 n n C1 C2 ICT sing 152 n n O2 HO2 ICT sing 153 n n C2 O7 ICT sing 154 n n C2 C3 ICT sing 155 n n C2 H2 ICT sing 156 n n O7 HO7 ICT sing 157 n n C3 C4 ICT sing 158 n n C3 C6 ICT sing 159 n n C3 H3 ICT sing 160 n n C4 C5 ICT sing 161 n n C4 H41 ICT sing 162 n n C4 H42 ICT sing 163 n n C5 O3 ICT doub 164 n n C5 O4 ICT sing 165 n n O4 HO4 ICT sing 166 n n C6 O5 ICT doub 167 n n C6 O6 ICT sing 168 n n O6 HO6 ICT sing 169 n n # _atom_sites.entry_id 3MAS _atom_sites.fract_transf_matrix[1][1] 0.012028 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012028 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003241 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAP A 1 423 1 NAP NAP . D 4 ICT A 1 424 1 ICT ICT . E 3 NAP B 1 415 2 NAP NAP . F 4 ICT B 1 416 2 ICT ICT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ICT . . . D 4 31.638 -3.777 16.061 0.9 89.19 ? C1 ICT 424 A 1 HETATM 2 O O1 ICT . . . D 4 31.735 -4.982 16.227 0.9 90.06 ? O1 ICT 424 A 1 HETATM 3 O O2 ICT . . . D 4 32.611 -2.901 16.513 0.9 89.82 ? O2 ICT 424 A 1 HETATM 4 C C2 ICT . . . D 4 30.476 -3.207 15.301 0.9 89.61 ? C2 ICT 424 A 1 HETATM 5 O O7 ICT . . . D 4 30.729 -3.053 13.955 0.9 90.82 ? O7 ICT 424 A 1 HETATM 6 C C3 ICT . . . D 4 29.883 -1.98 15.937 0.9 88.43 ? C3 ICT 424 A 1 HETATM 7 C C4 ICT . . . D 4 28.388 -1.891 15.872 0.9 86.29 ? C4 ICT 424 A 1 HETATM 8 C C5 ICT . . . D 4 27.606 -3.153 16.029 0.9 88 ? C5 ICT 424 A 1 HETATM 9 O O3 ICT . . . D 4 26.381 -3.284 15.416 0.9 89.7 ? O3 ICT 424 A 1 HETATM 10 O O4 ICT . . . D 4 28.009 -4.023 16.78 0.9 88.59 ? O4 ICT 424 A 1 HETATM 11 C C6 ICT . . . D 4 30.463 -0.703 15.443 0.9 88.64 ? C6 ICT 424 A 1 HETATM 12 O O5 ICT . . . D 4 31.63 -0.431 15.632 0.9 88.34 ? O5 ICT 424 A 1 HETATM 13 O O6 ICT . . . D 4 29.604 0.287 15.058 0.9 90.79 ? O6 ICT 424 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #