data_3MAT
#
_model_server_result.job_id            nk58qGYEfustbU7tgEx80A 
_model_server_result.datetime_utc      '2024-12-02 06:33:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3mat 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":501}' 
#
_entry.id    3MAT 
#
_exptl.entry_id    3MAT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.12 
_cell.angle_gamma         90 
_cell.entry_id            3MAT 
_cell.length_a            39.297 
_cell.length_b            65.155 
_cell.length_c            51.371 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3MAT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA,PQS 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             E 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 B C AHH 1 I AHH 1 1_555 B N ALA 2 I ALA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.297 ? 
metalc ? metalc1 A O ASN 74 A ASN 74 1_555 E NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? 
metalc ? metalc2 A O VAL 76 A VAL 76 1_555 E NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.699 ? 
metalc ? metalc3 A OD1 ASP 97 A ASP 97 1_555 D CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? 
metalc ? metalc4 A OD2 ASP 97 A ASP 97 1_555 D CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? 
metalc ? metalc5 A OD2 ASP 108 A ASP 108 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.92 ? 
metalc ? metalc6 A OD1 ASP 108 A ASP 108 1_555 D CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
metalc ? metalc7 A NE2 HIS 171 A HIS 171 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.154 ? 
metalc ? metalc8 A OE2 GLU 204 A GLU 204 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.461 ? 
metalc ? metalc9 A O SER 231 A SER 231 1_555 E NA NA . A NA 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? 
metalc ? metalc10 A OE2 GLU 235 A GLU 235 1_555 C CO CO . A CO 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? 
metalc ? metalc11 A OE1 GLU 235 A GLU 235 1_555 D CO CO . A CO 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc12 C CO CO . A CO 401 1_555 B O1 AHH 1 I AHH 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc13 C CO CO . A CO 401 1_555 B O AHH 1 I AHH 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.479 ? 
metalc ? metalc14 D CO CO . A CO 402 1_555 B N AHH 1 I AHH 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.348 ? 
metalc ? metalc15 D CO CO . A CO 402 1_555 B O1 AHH 1 I AHH 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.867 ? 
metalc ? metalc16 E NA NA . A NA 501 1_555 F O HOH . A HOH 521 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.789 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3MAT 
_atom_sites.fract_transf_matrix[1][1]    0.025447 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.007354 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015348 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020263 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CO A 1 401 401 CO CO . 
D 3 CO A 1 402 402 CO CO . 
E 4 NA A 1 501 501 NA NA . 
F 5 HOH A 1 502 1 HOH HOH . 
F 5 HOH A 2 503 2 HOH HOH . 
F 5 HOH A 3 504 3 HOH HOH . 
F 5 HOH A 4 505 4 HOH HOH . 
F 5 HOH A 5 506 5 HOH HOH . 
F 5 HOH A 6 507 6 HOH HOH . 
F 5 HOH A 7 508 8 HOH HOH . 
F 5 HOH A 8 509 9 HOH HOH . 
F 5 HOH A 9 510 10 HOH HOH . 
F 5 HOH A 10 511 11 HOH HOH . 
F 5 HOH A 11 512 12 HOH HOH . 
F 5 HOH A 12 513 13 HOH HOH . 
F 5 HOH A 13 514 14 HOH HOH . 
F 5 HOH A 14 515 15 HOH HOH . 
F 5 HOH A 15 516 16 HOH HOH . 
F 5 HOH A 16 517 17 HOH HOH . 
F 5 HOH A 17 518 18 HOH HOH . 
F 5 HOH A 18 519 19 HOH HOH . 
F 5 HOH A 19 520 20 HOH HOH . 
F 5 HOH A 20 521 21 HOH HOH . 
F 5 HOH A 21 522 22 HOH HOH . 
F 5 HOH A 22 523 23 HOH HOH . 
F 5 HOH A 23 524 24 HOH HOH . 
F 5 HOH A 24 525 25 HOH HOH . 
F 5 HOH A 25 526 26 HOH HOH . 
F 5 HOH A 26 527 27 HOH HOH . 
F 5 HOH A 27 528 28 HOH HOH . 
F 5 HOH A 28 529 29 HOH HOH . 
F 5 HOH A 29 530 30 HOH HOH . 
F 5 HOH A 30 531 31 HOH HOH . 
F 5 HOH A 31 532 32 HOH HOH . 
F 5 HOH A 32 533 33 HOH HOH . 
F 5 HOH A 33 534 34 HOH HOH . 
F 5 HOH A 34 535 35 HOH HOH . 
F 5 HOH A 35 536 36 HOH HOH . 
F 5 HOH A 36 537 37 HOH HOH . 
F 5 HOH A 37 538 38 HOH HOH . 
F 5 HOH A 38 539 39 HOH HOH . 
F 5 HOH A 39 540 40 HOH HOH . 
F 5 HOH A 40 541 41 HOH HOH . 
F 5 HOH A 41 542 42 HOH HOH . 
F 5 HOH A 42 543 43 HOH HOH . 
F 5 HOH A 43 544 44 HOH HOH . 
F 5 HOH A 44 545 45 HOH HOH . 
F 5 HOH A 45 546 46 HOH HOH . 
F 5 HOH A 46 547 47 HOH HOH . 
F 5 HOH A 47 548 48 HOH HOH . 
F 5 HOH A 48 549 49 HOH HOH . 
F 5 HOH A 49 550 50 HOH HOH . 
F 5 HOH A 50 551 51 HOH HOH . 
F 5 HOH A 51 552 52 HOH HOH . 
F 5 HOH A 52 553 53 HOH HOH . 
F 5 HOH A 53 554 54 HOH HOH . 
F 5 HOH A 54 555 55 HOH HOH . 
F 5 HOH A 55 556 56 HOH HOH . 
F 5 HOH A 56 557 57 HOH HOH . 
F 5 HOH A 57 558 58 HOH HOH . 
F 5 HOH A 58 559 59 HOH HOH . 
F 5 HOH A 59 560 60 HOH HOH . 
F 5 HOH A 60 561 61 HOH HOH . 
F 5 HOH A 61 562 62 HOH HOH . 
F 5 HOH A 62 563 63 HOH HOH . 
F 5 HOH A 63 564 64 HOH HOH . 
F 5 HOH A 64 565 65 HOH HOH . 
F 5 HOH A 65 566 66 HOH HOH . 
F 5 HOH A 66 567 67 HOH HOH . 
F 5 HOH A 67 568 68 HOH HOH . 
F 5 HOH A 68 569 69 HOH HOH . 
F 5 HOH A 69 570 70 HOH HOH . 
F 5 HOH A 70 571 71 HOH HOH . 
F 5 HOH A 71 572 72 HOH HOH . 
F 5 HOH A 72 573 73 HOH HOH . 
F 5 HOH A 73 574 74 HOH HOH . 
F 5 HOH A 74 575 75 HOH HOH . 
F 5 HOH A 75 576 77 HOH HOH . 
F 5 HOH A 76 577 78 HOH HOH . 
F 5 HOH A 77 578 79 HOH HOH . 
F 5 HOH A 78 579 81 HOH HOH . 
F 5 HOH A 79 580 82 HOH HOH . 
F 5 HOH A 80 581 83 HOH HOH . 
F 5 HOH A 81 582 84 HOH HOH . 
F 5 HOH A 82 583 85 HOH HOH . 
F 5 HOH A 83 584 86 HOH HOH . 
F 5 HOH A 84 585 87 HOH HOH . 
F 5 HOH A 85 586 88 HOH HOH . 
F 5 HOH A 86 587 89 HOH HOH . 
F 5 HOH A 87 588 90 HOH HOH . 
F 5 HOH A 88 589 91 HOH HOH . 
F 5 HOH A 89 590 92 HOH HOH . 
G 5 HOH I 1 7 7 HOH HOH . 
G 5 HOH I 2 76 76 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -5.917 
_atom_site.Cartn_y               7.273 
_atom_site.Cartn_z               3.404 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        28.93 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           501 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#