data_3MB3 # _model_server_result.job_id qpN1occIR155KDkEMwgU_g _model_server_result.datetime_utc '2024-11-05 13:33:32' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mb3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1}' # _entry.id 3MB3 # _exptl.entry_id 3MB3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 99.131 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-methylpyrrolidin-2-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3MB3 _cell.length_a 92.09 _cell.length_b 92.09 _cell.length_c 76.12 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MB3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H9 N O' _chem_comp.formula_weight 99.131 _chem_comp.id MB3 _chem_comp.mon_nstd_flag . _chem_comp.name 1-methylpyrrolidin-2-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAA NAG MB3 sing 218 n n CAA HAA MB3 sing 219 n n CAA HAAA MB3 sing 220 n n CAA HAAB MB3 sing 221 n n CAF OAB MB3 doub 222 n n CAE CAC MB3 sing 223 n n CAC CAD MB3 sing 224 n n CAC HAC MB3 sing 225 n n CAC HACA MB3 sing 226 n n CAF CAD MB3 sing 227 n n CAD HAD MB3 sing 228 n n CAD HADA MB3 sing 229 n n NAG CAE MB3 sing 230 n n CAE HAE MB3 sing 231 n n CAE HAEA MB3 sing 232 n n NAG CAF MB3 sing 233 n n # _atom_sites.entry_id 3MB3 _atom_sites.fract_transf_matrix[1][1] 0.010859 _atom_sites.fract_transf_matrix[1][2] 0.006269 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012539 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013137 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MB3 A 1 1 1 MB3 MB3 . C 3 HOH A 1 2 2 HOH HOH . C 3 HOH A 2 3 3 HOH HOH . C 3 HOH A 3 4 4 HOH HOH . C 3 HOH A 4 5 5 HOH HOH . C 3 HOH A 5 6 6 HOH HOH . C 3 HOH A 6 8 8 HOH HOH . C 3 HOH A 7 9 9 HOH HOH . C 3 HOH A 8 10 10 HOH HOH . C 3 HOH A 9 11 11 HOH HOH . C 3 HOH A 10 12 12 HOH HOH . C 3 HOH A 11 14 14 HOH HOH . C 3 HOH A 12 15 15 HOH HOH . C 3 HOH A 13 16 16 HOH HOH . C 3 HOH A 14 17 17 HOH HOH . C 3 HOH A 15 18 18 HOH HOH . C 3 HOH A 16 21 21 HOH HOH . C 3 HOH A 17 22 22 HOH HOH . C 3 HOH A 18 23 23 HOH HOH . C 3 HOH A 19 24 24 HOH HOH . C 3 HOH A 20 25 25 HOH HOH . C 3 HOH A 21 27 27 HOH HOH . C 3 HOH A 22 28 28 HOH HOH . C 3 HOH A 23 29 29 HOH HOH . C 3 HOH A 24 30 30 HOH HOH . C 3 HOH A 25 31 31 HOH HOH . C 3 HOH A 26 32 32 HOH HOH . C 3 HOH A 27 33 33 HOH HOH . C 3 HOH A 28 34 34 HOH HOH . C 3 HOH A 29 35 35 HOH HOH . C 3 HOH A 30 36 36 HOH HOH . C 3 HOH A 31 37 37 HOH HOH . C 3 HOH A 32 38 38 HOH HOH . C 3 HOH A 33 39 39 HOH HOH . C 3 HOH A 34 40 40 HOH HOH . C 3 HOH A 35 41 41 HOH HOH . C 3 HOH A 36 42 42 HOH HOH . C 3 HOH A 37 43 43 HOH HOH . C 3 HOH A 38 44 44 HOH HOH . C 3 HOH A 39 45 45 HOH HOH . C 3 HOH A 40 46 46 HOH HOH . C 3 HOH A 41 47 47 HOH HOH . C 3 HOH A 42 48 48 HOH HOH . C 3 HOH A 43 49 49 HOH HOH . C 3 HOH A 44 50 50 HOH HOH . C 3 HOH A 45 52 52 HOH HOH . C 3 HOH A 46 53 53 HOH HOH . C 3 HOH A 47 54 54 HOH HOH . C 3 HOH A 48 55 55 HOH HOH . C 3 HOH A 49 58 58 HOH HOH . C 3 HOH A 50 59 59 HOH HOH . C 3 HOH A 51 60 60 HOH HOH . C 3 HOH A 52 62 62 HOH HOH . C 3 HOH A 53 64 64 HOH HOH . C 3 HOH A 54 65 65 HOH HOH . C 3 HOH A 55 66 66 HOH HOH . C 3 HOH A 56 67 67 HOH HOH . C 3 HOH A 57 70 70 HOH HOH . C 3 HOH A 58 73 73 HOH HOH . C 3 HOH A 59 74 74 HOH HOH . C 3 HOH A 60 75 75 HOH HOH . C 3 HOH A 61 76 76 HOH HOH . C 3 HOH A 62 77 77 HOH HOH . C 3 HOH A 63 80 80 HOH HOH . C 3 HOH A 64 90 90 HOH HOH . C 3 HOH A 65 99 99 HOH HOH . C 3 HOH A 66 101 101 HOH HOH . C 3 HOH A 67 102 102 HOH HOH . C 3 HOH A 68 104 104 HOH HOH . C 3 HOH A 69 105 105 HOH HOH . C 3 HOH A 70 106 106 HOH HOH . C 3 HOH A 71 110 110 HOH HOH . C 3 HOH A 72 111 111 HOH HOH . C 3 HOH A 73 123 123 HOH HOH . C 3 HOH A 74 124 124 HOH HOH . C 3 HOH A 75 150 150 HOH HOH . C 3 HOH A 76 151 151 HOH HOH . C 3 HOH A 77 152 152 HOH HOH . C 3 HOH A 78 153 153 HOH HOH . C 3 HOH A 79 155 155 HOH HOH . C 3 HOH A 80 156 156 HOH HOH . C 3 HOH A 81 157 157 HOH HOH . C 3 HOH A 82 159 159 HOH HOH . C 3 HOH A 83 160 160 HOH HOH . C 3 HOH A 84 161 161 HOH HOH . C 3 HOH A 85 1435 1 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CAA MB3 . . . B 2 19.9 44.541 -1.809 1 91.51 ? CAA MB3 1 A 1 HETATM 2 O OAB MB3 . . . B 2 18.783 46.402 0.397 1 86.62 ? OAB MB3 1 A 1 HETATM 3 C CAC MB3 . . . B 2 16.646 43.608 -0.074 1 62.47 ? CAC MB3 1 A 1 HETATM 4 C CAD MB3 . . . B 2 17.159 44.697 0.87 1 68.01 ? CAD MB3 1 A 1 HETATM 5 C CAE MB3 . . . B 2 17.919 43.176 -0.783 1 93.65 ? CAE MB3 1 A 1 HETATM 6 C CAF MB3 . . . B 2 18.335 45.283 0.118 1 78.09 ? CAF MB3 1 A 1 HETATM 7 N NAG MB3 . . . B 2 18.752 44.4 -0.819 1 103.8 ? NAG MB3 1 A 1 # _model_server_stats.io_time_ms 61 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 228 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 7 #