data_3MB4
#
_model_server_result.job_id            6flw52R-D9biPEMgOExGjA 
_model_server_result.datetime_utc      '2024-11-05 13:54:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3mb4 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":2}' 
#
_entry.id    3MB4 
#
_exptl.entry_id    3MB4 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              99.131 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1-methylpyrrolidin-2-one 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3MB4 
_cell.length_a            41.957 
_cell.length_b            52.221 
_cell.length_c            134.964 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3MB4 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,N 1 1 
B,G,H,I,J,K,L,M,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 E N N 
? 3 J N N 
#
_chem_comp.formula           'C5 H9 N O' 
_chem_comp.formula_weight    99.131 
_chem_comp.id                MB3 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1-methylpyrrolidin-2-one 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA NAG MB3 sing 227 n n 
CAA HAA MB3 sing 228 n n 
CAA HAAA MB3 sing 229 n n 
CAA HAAB MB3 sing 230 n n 
CAF OAB MB3 doub 231 n n 
CAE CAC MB3 sing 232 n n 
CAC CAD MB3 sing 233 n n 
CAC HAC MB3 sing 234 n n 
CAC HACA MB3 sing 235 n n 
CAF CAD MB3 sing 236 n n 
CAD HAD MB3 sing 237 n n 
CAD HADA MB3 sing 238 n n 
NAG CAE MB3 sing 239 n n 
CAE HAE MB3 sing 240 n n 
CAE HAEA MB3 sing 241 n n 
NAG CAF MB3 sing 242 n n 
#
_atom_sites.entry_id                     3MB4 
_atom_sites.fract_transf_matrix[1][1]    0.023834 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.019149 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007409 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 1 1 EDO EDO . 
D 2 EDO A 1 3 3 EDO EDO . 
E 3 MB3 A 1 2 2 MB3 MB3 . 
F 4 CL A 1 735 2 CL CL . 
G 2 EDO B 1 2 2 EDO EDO . 
H 2 EDO B 1 4 4 EDO EDO . 
I 2 EDO B 1 5 5 EDO EDO . 
J 3 MB3 B 1 1 1 MB3 MB3 . 
K 4 CL B 1 735 1 CL CL . 
L 4 CL B 1 3 3 CL CL . 
M 4 CL B 1 736 4 CL CL . 
N 5 HOH A 1 4 4 HOH HOH . 
N 5 HOH A 2 6 6 HOH HOH . 
N 5 HOH A 3 9 9 HOH HOH . 
N 5 HOH A 4 13 13 HOH HOH . 
N 5 HOH A 5 14 14 HOH HOH . 
N 5 HOH A 6 15 15 HOH HOH . 
N 5 HOH A 7 17 17 HOH HOH . 
N 5 HOH A 8 20 20 HOH HOH . 
N 5 HOH A 9 21 21 HOH HOH . 
N 5 HOH A 10 22 22 HOH HOH . 
N 5 HOH A 11 23 23 HOH HOH . 
N 5 HOH A 12 28 28 HOH HOH . 
N 5 HOH A 13 29 29 HOH HOH . 
N 5 HOH A 14 30 30 HOH HOH . 
N 5 HOH A 15 31 31 HOH HOH . 
N 5 HOH A 16 34 34 HOH HOH . 
N 5 HOH A 17 39 39 HOH HOH . 
N 5 HOH A 18 42 42 HOH HOH . 
N 5 HOH A 19 43 43 HOH HOH . 
N 5 HOH A 20 46 46 HOH HOH . 
N 5 HOH A 21 47 47 HOH HOH . 
N 5 HOH A 22 49 49 HOH HOH . 
N 5 HOH A 23 57 57 HOH HOH . 
N 5 HOH A 24 58 58 HOH HOH . 
N 5 HOH A 25 59 59 HOH HOH . 
N 5 HOH A 26 62 62 HOH HOH . 
N 5 HOH A 27 68 68 HOH HOH . 
N 5 HOH A 28 71 71 HOH HOH . 
N 5 HOH A 29 74 74 HOH HOH . 
N 5 HOH A 30 75 75 HOH HOH . 
N 5 HOH A 31 80 80 HOH HOH . 
N 5 HOH A 32 83 83 HOH HOH . 
N 5 HOH A 33 88 88 HOH HOH . 
N 5 HOH A 34 89 89 HOH HOH . 
N 5 HOH A 35 91 91 HOH HOH . 
N 5 HOH A 36 95 95 HOH HOH . 
N 5 HOH A 37 96 96 HOH HOH . 
N 5 HOH A 38 99 99 HOH HOH . 
N 5 HOH A 39 101 101 HOH HOH . 
N 5 HOH A 40 107 107 HOH HOH . 
N 5 HOH A 41 115 115 HOH HOH . 
N 5 HOH A 42 116 116 HOH HOH . 
N 5 HOH A 43 122 122 HOH HOH . 
N 5 HOH A 44 126 126 HOH HOH . 
N 5 HOH A 45 127 127 HOH HOH . 
N 5 HOH A 46 130 130 HOH HOH . 
N 5 HOH A 47 132 132 HOH HOH . 
N 5 HOH A 48 137 137 HOH HOH . 
N 5 HOH A 49 142 142 HOH HOH . 
N 5 HOH A 50 143 143 HOH HOH . 
N 5 HOH A 51 145 145 HOH HOH . 
N 5 HOH A 52 148 148 HOH HOH . 
N 5 HOH A 53 150 150 HOH HOH . 
N 5 HOH A 54 151 151 HOH HOH . 
N 5 HOH A 55 153 153 HOH HOH . 
N 5 HOH A 56 155 155 HOH HOH . 
N 5 HOH A 57 157 157 HOH HOH . 
N 5 HOH A 58 158 158 HOH HOH . 
N 5 HOH A 59 161 161 HOH HOH . 
N 5 HOH A 60 162 162 HOH HOH . 
N 5 HOH A 61 163 163 HOH HOH . 
N 5 HOH A 62 165 165 HOH HOH . 
N 5 HOH A 63 166 166 HOH HOH . 
N 5 HOH A 64 167 167 HOH HOH . 
N 5 HOH A 65 168 168 HOH HOH . 
N 5 HOH A 66 169 169 HOH HOH . 
N 5 HOH A 67 170 170 HOH HOH . 
N 5 HOH A 68 171 171 HOH HOH . 
N 5 HOH A 69 172 172 HOH HOH . 
N 5 HOH A 70 173 173 HOH HOH . 
N 5 HOH A 71 178 178 HOH HOH . 
N 5 HOH A 72 179 179 HOH HOH . 
N 5 HOH A 73 180 180 HOH HOH . 
N 5 HOH A 74 181 181 HOH HOH . 
N 5 HOH A 75 183 183 HOH HOH . 
N 5 HOH A 76 193 193 HOH HOH . 
N 5 HOH A 77 210 210 HOH HOH . 
N 5 HOH A 78 211 211 HOH HOH . 
N 5 HOH A 79 214 214 HOH HOH . 
N 5 HOH A 80 215 215 HOH HOH . 
N 5 HOH A 81 216 216 HOH HOH . 
N 5 HOH A 82 217 217 HOH HOH . 
N 5 HOH A 83 222 222 HOH HOH . 
N 5 HOH A 84 223 223 HOH HOH . 
N 5 HOH A 85 224 224 HOH HOH . 
N 5 HOH A 86 226 226 HOH HOH . 
N 5 HOH A 87 229 229 HOH HOH . 
N 5 HOH A 88 230 230 HOH HOH . 
N 5 HOH A 89 231 231 HOH HOH . 
N 5 HOH A 90 233 233 HOH HOH . 
N 5 HOH A 91 235 235 HOH HOH . 
N 5 HOH A 92 236 236 HOH HOH . 
N 5 HOH A 93 240 240 HOH HOH . 
N 5 HOH A 94 241 241 HOH HOH . 
N 5 HOH A 95 242 242 HOH HOH . 
N 5 HOH A 96 246 246 HOH HOH . 
N 5 HOH A 97 251 251 HOH HOH . 
N 5 HOH A 98 252 252 HOH HOH . 
N 5 HOH A 99 256 256 HOH HOH . 
N 5 HOH A 100 257 257 HOH HOH . 
N 5 HOH A 101 258 258 HOH HOH . 
N 5 HOH A 102 261 261 HOH HOH . 
N 5 HOH A 103 736 1 HOH HOH . 
O 5 HOH B 1 7 7 HOH HOH . 
O 5 HOH B 2 8 8 HOH HOH . 
O 5 HOH B 3 11 11 HOH HOH . 
O 5 HOH B 4 12 12 HOH HOH . 
O 5 HOH B 5 16 16 HOH HOH . 
O 5 HOH B 6 18 18 HOH HOH . 
O 5 HOH B 7 19 19 HOH HOH . 
O 5 HOH B 8 24 24 HOH HOH . 
O 5 HOH B 9 25 25 HOH HOH . 
O 5 HOH B 10 26 26 HOH HOH . 
O 5 HOH B 11 27 27 HOH HOH . 
O 5 HOH B 12 33 33 HOH HOH . 
O 5 HOH B 13 37 37 HOH HOH . 
O 5 HOH B 14 44 44 HOH HOH . 
O 5 HOH B 15 50 50 HOH HOH . 
O 5 HOH B 16 52 52 HOH HOH . 
O 5 HOH B 17 54 54 HOH HOH . 
O 5 HOH B 18 55 55 HOH HOH . 
O 5 HOH B 19 56 56 HOH HOH . 
O 5 HOH B 20 60 60 HOH HOH . 
O 5 HOH B 21 63 63 HOH HOH . 
O 5 HOH B 22 64 64 HOH HOH . 
O 5 HOH B 23 65 65 HOH HOH . 
O 5 HOH B 24 70 70 HOH HOH . 
O 5 HOH B 25 72 72 HOH HOH . 
O 5 HOH B 26 77 77 HOH HOH . 
O 5 HOH B 27 79 79 HOH HOH . 
O 5 HOH B 28 82 82 HOH HOH . 
O 5 HOH B 29 84 84 HOH HOH . 
O 5 HOH B 30 85 85 HOH HOH . 
O 5 HOH B 31 97 97 HOH HOH . 
O 5 HOH B 32 100 100 HOH HOH . 
O 5 HOH B 33 103 103 HOH HOH . 
O 5 HOH B 34 106 106 HOH HOH . 
O 5 HOH B 35 108 108 HOH HOH . 
O 5 HOH B 36 109 109 HOH HOH . 
O 5 HOH B 37 113 113 HOH HOH . 
O 5 HOH B 38 114 114 HOH HOH . 
O 5 HOH B 39 117 117 HOH HOH . 
O 5 HOH B 40 119 119 HOH HOH . 
O 5 HOH B 41 121 121 HOH HOH . 
O 5 HOH B 42 123 123 HOH HOH . 
O 5 HOH B 43 124 124 HOH HOH . 
O 5 HOH B 44 128 128 HOH HOH . 
O 5 HOH B 45 133 133 HOH HOH . 
O 5 HOH B 46 134 134 HOH HOH . 
O 5 HOH B 47 139 139 HOH HOH . 
O 5 HOH B 48 146 146 HOH HOH . 
O 5 HOH B 49 152 152 HOH HOH . 
O 5 HOH B 50 154 154 HOH HOH . 
O 5 HOH B 51 174 174 HOH HOH . 
O 5 HOH B 52 175 175 HOH HOH . 
O 5 HOH B 53 176 176 HOH HOH . 
O 5 HOH B 54 177 177 HOH HOH . 
O 5 HOH B 55 182 182 HOH HOH . 
O 5 HOH B 56 184 184 HOH HOH . 
O 5 HOH B 57 185 185 HOH HOH . 
O 5 HOH B 58 186 186 HOH HOH . 
O 5 HOH B 59 187 187 HOH HOH . 
O 5 HOH B 60 189 189 HOH HOH . 
O 5 HOH B 61 191 191 HOH HOH . 
O 5 HOH B 62 192 192 HOH HOH . 
O 5 HOH B 63 194 194 HOH HOH . 
O 5 HOH B 64 195 195 HOH HOH . 
O 5 HOH B 65 196 196 HOH HOH . 
O 5 HOH B 66 197 197 HOH HOH . 
O 5 HOH B 67 198 198 HOH HOH . 
O 5 HOH B 68 199 199 HOH HOH . 
O 5 HOH B 69 200 200 HOH HOH . 
O 5 HOH B 70 201 201 HOH HOH . 
O 5 HOH B 71 202 202 HOH HOH . 
O 5 HOH B 72 203 203 HOH HOH . 
O 5 HOH B 73 204 204 HOH HOH . 
O 5 HOH B 74 205 205 HOH HOH . 
O 5 HOH B 75 206 206 HOH HOH . 
O 5 HOH B 76 207 207 HOH HOH . 
O 5 HOH B 77 208 208 HOH HOH . 
O 5 HOH B 78 209 209 HOH HOH . 
O 5 HOH B 79 212 212 HOH HOH . 
O 5 HOH B 80 213 213 HOH HOH . 
O 5 HOH B 81 218 218 HOH HOH . 
O 5 HOH B 82 219 219 HOH HOH . 
O 5 HOH B 83 220 220 HOH HOH . 
O 5 HOH B 84 221 221 HOH HOH . 
O 5 HOH B 85 227 227 HOH HOH . 
O 5 HOH B 86 228 228 HOH HOH . 
O 5 HOH B 87 232 232 HOH HOH . 
O 5 HOH B 88 234 234 HOH HOH . 
O 5 HOH B 89 237 237 HOH HOH . 
O 5 HOH B 90 238 238 HOH HOH . 
O 5 HOH B 91 239 239 HOH HOH . 
O 5 HOH B 92 243 243 HOH HOH . 
O 5 HOH B 93 244 244 HOH HOH . 
O 5 HOH B 94 245 245 HOH HOH . 
O 5 HOH B 95 247 247 HOH HOH . 
O 5 HOH B 96 248 248 HOH HOH . 
O 5 HOH B 97 249 249 HOH HOH . 
O 5 HOH B 98 250 250 HOH HOH . 
O 5 HOH B 99 253 253 HOH HOH . 
O 5 HOH B 100 254 254 HOH HOH . 
O 5 HOH B 101 255 255 HOH HOH . 
O 5 HOH B 102 259 259 HOH HOH . 
O 5 HOH B 103 260 260 HOH HOH . 
O 5 HOH B 104 262 262 HOH HOH . 
O 5 HOH B 105 737 5 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAA MB3 . . . E 3 29.92 41.472 28.477 1 38.66 ? CAA MB3 2 A 1 
HETATM 2 O OAB MB3 . . . E 3 31.081 41.001 30.803 1 45.45 ? OAB MB3 2 A 1 
HETATM 3 C CAC MB3 . . . E 3 28.407 38.691 30.515 1 58.41 ? CAC MB3 2 A 1 
HETATM 4 C CAD MB3 . . . E 3 29.303 39.393 31.525 1 67.07 ? CAD MB3 2 A 1 
HETATM 5 C CAE MB3 . . . E 3 28.132 39.787 29.484 1 54.28 ? CAE MB3 2 A 1 
HETATM 6 C CAF MB3 . . . E 3 30.011 40.41 30.635 1 33.08 ? CAF MB3 2 A 1 
HETATM 7 N NAG MB3 . . . E 3 29.37 40.582 29.512 1 58.63 ? NAG MB3 2 A 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           6 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           207 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           7 
#