data_3MBD # _model_server_result.job_id txww0LKa5t9_8a0LdhsPbw _model_server_result.datetime_utc '2024-11-30 04:02:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mbd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":339}' # _entry.id 3MBD # _exptl.entry_id 3MBD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MBD _cell.length_a 121.96 _cell.length_b 137.61 _cell.length_c 62.23 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MBD _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_554 -x,y,-z-1/2 -1 0 0 0 1 0 0 0 -1 0 0 -31.115 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3MBD _atom_sites.fract_transf_matrix[1][1] 0.008199 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007267 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016069 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 339 1 PO4 PO4 . C 3 CL A 1 340 1 CL CL . D 4 HOH A 1 341 1 HOH HOH . D 4 HOH A 2 342 2 HOH HOH . D 4 HOH A 3 343 3 HOH HOH . D 4 HOH A 4 344 4 HOH HOH . D 4 HOH A 5 345 5 HOH HOH . D 4 HOH A 6 346 6 HOH HOH . D 4 HOH A 7 347 7 HOH HOH . D 4 HOH A 8 348 8 HOH HOH . D 4 HOH A 9 349 9 HOH HOH . D 4 HOH A 10 350 10 HOH HOH . D 4 HOH A 11 351 11 HOH HOH . D 4 HOH A 12 352 12 HOH HOH . D 4 HOH A 13 353 13 HOH HOH . D 4 HOH A 14 354 14 HOH HOH . D 4 HOH A 15 355 16 HOH HOH . D 4 HOH A 16 356 17 HOH HOH . D 4 HOH A 17 357 18 HOH HOH . D 4 HOH A 18 358 19 HOH HOH . D 4 HOH A 19 359 20 HOH HOH . D 4 HOH A 20 360 21 HOH HOH . D 4 HOH A 21 361 22 HOH HOH . D 4 HOH A 22 362 23 HOH HOH . D 4 HOH A 23 363 24 HOH HOH . D 4 HOH A 24 364 25 HOH HOH . D 4 HOH A 25 365 26 HOH HOH . D 4 HOH A 26 366 27 HOH HOH . D 4 HOH A 27 367 28 HOH HOH . D 4 HOH A 28 368 29 HOH HOH . D 4 HOH A 29 369 30 HOH HOH . D 4 HOH A 30 370 31 HOH HOH . D 4 HOH A 31 371 32 HOH HOH . D 4 HOH A 32 372 33 HOH HOH . D 4 HOH A 33 373 34 HOH HOH . D 4 HOH A 34 374 35 HOH HOH . D 4 HOH A 35 375 36 HOH HOH . D 4 HOH A 36 376 37 HOH HOH . D 4 HOH A 37 377 38 HOH HOH . D 4 HOH A 38 378 39 HOH HOH . D 4 HOH A 39 379 40 HOH HOH . D 4 HOH A 40 380 41 HOH HOH . D 4 HOH A 41 381 42 HOH HOH . D 4 HOH A 42 382 43 HOH HOH . D 4 HOH A 43 383 44 HOH HOH . D 4 HOH A 44 384 45 HOH HOH . D 4 HOH A 45 385 46 HOH HOH . D 4 HOH A 46 386 47 HOH HOH . D 4 HOH A 47 387 48 HOH HOH . D 4 HOH A 48 388 49 HOH HOH . D 4 HOH A 49 389 50 HOH HOH . D 4 HOH A 50 390 51 HOH HOH . D 4 HOH A 51 391 52 HOH HOH . D 4 HOH A 52 392 53 HOH HOH . D 4 HOH A 53 393 54 HOH HOH . D 4 HOH A 54 394 55 HOH HOH . D 4 HOH A 55 395 56 HOH HOH . D 4 HOH A 56 396 57 HOH HOH . D 4 HOH A 57 397 58 HOH HOH . D 4 HOH A 58 398 59 HOH HOH . D 4 HOH A 59 399 60 HOH HOH . D 4 HOH A 60 400 61 HOH HOH . D 4 HOH A 61 401 62 HOH HOH . D 4 HOH A 62 402 63 HOH HOH . D 4 HOH A 63 403 64 HOH HOH . D 4 HOH A 64 404 65 HOH HOH . D 4 HOH A 65 405 66 HOH HOH . D 4 HOH A 66 406 67 HOH HOH . D 4 HOH A 67 407 69 HOH HOH . D 4 HOH A 68 408 70 HOH HOH . D 4 HOH A 69 409 71 HOH HOH . D 4 HOH A 70 410 72 HOH HOH . D 4 HOH A 71 411 73 HOH HOH . D 4 HOH A 72 412 74 HOH HOH . D 4 HOH A 73 413 75 HOH HOH . D 4 HOH A 74 414 76 HOH HOH . D 4 HOH A 75 415 77 HOH HOH . D 4 HOH A 76 416 78 HOH HOH . D 4 HOH A 77 417 79 HOH HOH . D 4 HOH A 78 418 80 HOH HOH . D 4 HOH A 79 419 81 HOH HOH . D 4 HOH A 80 420 82 HOH HOH . D 4 HOH A 81 421 83 HOH HOH . D 4 HOH A 82 422 84 HOH HOH . D 4 HOH A 83 423 85 HOH HOH . D 4 HOH A 84 424 86 HOH HOH . D 4 HOH A 85 425 87 HOH HOH . D 4 HOH A 86 426 88 HOH HOH . D 4 HOH A 87 427 90 HOH HOH . D 4 HOH A 88 428 91 HOH HOH . D 4 HOH A 89 429 92 HOH HOH . D 4 HOH A 90 430 93 HOH HOH . D 4 HOH A 91 431 94 HOH HOH . D 4 HOH A 92 432 95 HOH HOH . D 4 HOH A 93 433 96 HOH HOH . D 4 HOH A 94 434 97 HOH HOH . D 4 HOH A 95 435 98 HOH HOH . D 4 HOH A 96 436 100 HOH HOH . D 4 HOH A 97 437 101 HOH HOH . D 4 HOH A 98 438 102 HOH HOH . D 4 HOH A 99 439 104 HOH HOH . D 4 HOH A 100 440 105 HOH HOH . D 4 HOH A 101 441 106 HOH HOH . D 4 HOH A 102 442 107 HOH HOH . D 4 HOH A 103 443 108 HOH HOH . D 4 HOH A 104 444 109 HOH HOH . D 4 HOH A 105 445 110 HOH HOH . D 4 HOH A 106 446 111 HOH HOH . D 4 HOH A 107 447 113 HOH HOH . D 4 HOH A 108 448 114 HOH HOH . D 4 HOH A 109 449 115 HOH HOH . D 4 HOH A 110 450 116 HOH HOH . D 4 HOH A 111 451 117 HOH HOH . D 4 HOH A 112 452 118 HOH HOH . D 4 HOH A 113 453 119 HOH HOH . D 4 HOH A 114 454 121 HOH HOH . D 4 HOH A 115 455 123 HOH HOH . D 4 HOH A 116 456 124 HOH HOH . D 4 HOH A 117 457 125 HOH HOH . D 4 HOH A 118 458 126 HOH HOH . D 4 HOH A 119 459 127 HOH HOH . D 4 HOH A 120 460 128 HOH HOH . D 4 HOH A 121 461 129 HOH HOH . D 4 HOH A 122 462 130 HOH HOH . D 4 HOH A 123 463 131 HOH HOH . D 4 HOH A 124 464 132 HOH HOH . D 4 HOH A 125 465 133 HOH HOH . D 4 HOH A 126 466 134 HOH HOH . D 4 HOH A 127 467 135 HOH HOH . D 4 HOH A 128 468 136 HOH HOH . D 4 HOH A 129 469 137 HOH HOH . D 4 HOH A 130 470 138 HOH HOH . D 4 HOH A 131 471 139 HOH HOH . D 4 HOH A 132 472 140 HOH HOH . D 4 HOH A 133 473 141 HOH HOH . D 4 HOH A 134 474 142 HOH HOH . D 4 HOH A 135 475 143 HOH HOH . D 4 HOH A 136 476 144 HOH HOH . D 4 HOH A 137 477 145 HOH HOH . D 4 HOH A 138 478 146 HOH HOH . D 4 HOH A 139 479 147 HOH HOH . D 4 HOH A 140 480 148 HOH HOH . D 4 HOH A 141 481 149 HOH HOH . D 4 HOH A 142 482 150 HOH HOH . D 4 HOH A 143 483 151 HOH HOH . D 4 HOH A 144 484 152 HOH HOH . D 4 HOH A 145 485 153 HOH HOH . D 4 HOH A 146 486 154 HOH HOH . D 4 HOH A 147 487 155 HOH HOH . D 4 HOH A 148 488 156 HOH HOH . D 4 HOH A 149 489 157 HOH HOH . D 4 HOH A 150 490 158 HOH HOH . D 4 HOH A 151 491 159 HOH HOH . D 4 HOH A 152 492 160 HOH HOH . D 4 HOH A 153 493 162 HOH HOH . D 4 HOH A 154 494 163 HOH HOH . D 4 HOH A 155 495 164 HOH HOH . D 4 HOH A 156 496 165 HOH HOH . D 4 HOH A 157 497 166 HOH HOH . D 4 HOH A 158 498 167 HOH HOH . D 4 HOH A 159 499 168 HOH HOH . D 4 HOH A 160 500 169 HOH HOH . D 4 HOH A 161 501 170 HOH HOH . D 4 HOH A 162 502 171 HOH HOH . D 4 HOH A 163 503 173 HOH HOH . D 4 HOH A 164 504 174 HOH HOH . D 4 HOH A 165 505 175 HOH HOH . D 4 HOH A 166 506 176 HOH HOH . D 4 HOH A 167 507 177 HOH HOH . D 4 HOH A 168 508 178 HOH HOH . D 4 HOH A 169 509 179 HOH HOH . D 4 HOH A 170 510 180 HOH HOH . D 4 HOH A 171 511 181 HOH HOH . D 4 HOH A 172 512 182 HOH HOH . D 4 HOH A 173 513 183 HOH HOH . D 4 HOH A 174 514 184 HOH HOH . D 4 HOH A 175 515 185 HOH HOH . D 4 HOH A 176 516 186 HOH HOH . D 4 HOH A 177 517 187 HOH HOH . D 4 HOH A 178 518 188 HOH HOH . D 4 HOH A 179 519 189 HOH HOH . D 4 HOH A 180 520 190 HOH HOH . D 4 HOH A 181 521 191 HOH HOH . D 4 HOH A 182 522 192 HOH HOH . D 4 HOH A 183 523 193 HOH HOH . D 4 HOH A 184 524 195 HOH HOH . D 4 HOH A 185 525 196 HOH HOH . D 4 HOH A 186 526 197 HOH HOH . D 4 HOH A 187 527 198 HOH HOH . D 4 HOH A 188 528 199 HOH HOH . D 4 HOH A 189 529 200 HOH HOH . D 4 HOH A 190 530 201 HOH HOH . D 4 HOH A 191 531 202 HOH HOH . D 4 HOH A 192 532 203 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -23.424 -19.35 -8.17 1 41.94 ? P PO4 339 A 1 HETATM 2 O O1 PO4 . . . B 2 -23.108 -18.375 -9.286 1 33.26 ? O1 PO4 339 A 1 HETATM 3 O O2 PO4 . . . B 2 -23.012 -20.8 -8.482 1 35.41 ? O2 PO4 339 A 1 HETATM 4 O O3 PO4 . . . B 2 -24.936 -19.222 -7.937 1 39.47 ? O3 PO4 339 A 1 HETATM 5 O O4 PO4 . . . B 2 -22.595 -18.993 -6.922 1 38.82 ? O4 PO4 339 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #