data_3MBL # _model_server_result.job_id Woq_hggV9u8X2BXZ3zxALA _model_server_result.datetime_utc '2024-11-07 22:16:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mbl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":536}' # _entry.id 3MBL # _exptl.entry_id 3MBL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3MBL _cell.length_a 81.982 _cell.length_b 81.982 _cell.length_c 129.928 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MBL _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1,2 A,B,C,D,E 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 4_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 40.991 70.998495 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 135 A ASN 195 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc2 A OD2 ASP 148 A ASP 208 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.962 ? metalc ? metalc3 B O1B ADP . A ADP 535 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.932 ? metalc ? metalc4 B O2A ADP . A ADP 535 1_555 C MG MG . A MG 536 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc5 C MG MG . A MG 536 1_555 E O HOH . A HOH 617 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? metalc ? metalc6 C MG MG . A MG 536 1_555 E O HOH . A HOH 649 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3MBL _atom_sites.fract_transf_matrix[1][1] 0.012198 _atom_sites.fract_transf_matrix[1][2] 0.007042 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014085 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007697 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 535 535 ADP ADP . C 3 MG A 1 536 536 MG MG . D 4 LSG A 1 7 7 LSG LSG . E 5 HOH A 1 541 541 HOH HOH . E 5 HOH A 2 542 542 HOH HOH . E 5 HOH A 3 548 548 HOH HOH . E 5 HOH A 4 558 558 HOH HOH . E 5 HOH A 5 560 560 HOH HOH . E 5 HOH A 6 563 563 HOH HOH . E 5 HOH A 7 571 571 HOH HOH . E 5 HOH A 8 579 579 HOH HOH . E 5 HOH A 9 580 580 HOH HOH . E 5 HOH A 10 583 583 HOH HOH . E 5 HOH A 11 585 585 HOH HOH . E 5 HOH A 12 591 591 HOH HOH . E 5 HOH A 13 594 594 HOH HOH . E 5 HOH A 14 596 596 HOH HOH . E 5 HOH A 15 598 598 HOH HOH . E 5 HOH A 16 599 599 HOH HOH . E 5 HOH A 17 601 601 HOH HOH . E 5 HOH A 18 602 602 HOH HOH . E 5 HOH A 19 604 604 HOH HOH . E 5 HOH A 20 606 606 HOH HOH . E 5 HOH A 21 610 610 HOH HOH . E 5 HOH A 22 612 612 HOH HOH . E 5 HOH A 23 614 614 HOH HOH . E 5 HOH A 24 615 615 HOH HOH . E 5 HOH A 25 617 617 HOH HOH . E 5 HOH A 26 622 622 HOH HOH . E 5 HOH A 27 623 623 HOH HOH . E 5 HOH A 28 624 624 HOH HOH . E 5 HOH A 29 626 626 HOH HOH . E 5 HOH A 30 631 631 HOH HOH . E 5 HOH A 31 640 640 HOH HOH . E 5 HOH A 32 642 642 HOH HOH . E 5 HOH A 33 643 643 HOH HOH . E 5 HOH A 34 644 644 HOH HOH . E 5 HOH A 35 645 645 HOH HOH . E 5 HOH A 36 646 646 HOH HOH . E 5 HOH A 37 647 647 HOH HOH . E 5 HOH A 38 648 648 HOH HOH . E 5 HOH A 39 649 649 HOH HOH . E 5 HOH A 40 650 650 HOH HOH . E 5 HOH A 41 651 651 HOH HOH . E 5 HOH A 42 652 652 HOH HOH . E 5 HOH A 43 653 653 HOH HOH . E 5 HOH A 44 654 654 HOH HOH . E 5 HOH A 45 655 655 HOH HOH . E 5 HOH A 46 656 656 HOH HOH . E 5 HOH A 47 657 657 HOH HOH . E 5 HOH A 48 658 658 HOH HOH . E 5 HOH A 49 659 659 HOH HOH . E 5 HOH A 50 660 660 HOH HOH . E 5 HOH A 51 661 661 HOH HOH . E 5 HOH A 52 662 662 HOH HOH . E 5 HOH A 53 663 663 HOH HOH . E 5 HOH A 54 664 664 HOH HOH . E 5 HOH A 55 665 665 HOH HOH . E 5 HOH A 56 666 666 HOH HOH . E 5 HOH A 57 667 667 HOH HOH . E 5 HOH A 58 668 668 HOH HOH . E 5 HOH A 59 669 669 HOH HOH . E 5 HOH A 60 670 670 HOH HOH . E 5 HOH A 61 671 671 HOH HOH . E 5 HOH A 62 672 672 HOH HOH . E 5 HOH A 63 673 673 HOH HOH . E 5 HOH A 64 674 674 HOH HOH . E 5 HOH A 65 675 675 HOH HOH . E 5 HOH A 66 676 676 HOH HOH . E 5 HOH A 67 677 677 HOH HOH . E 5 HOH A 68 678 678 HOH HOH . E 5 HOH A 69 679 679 HOH HOH . E 5 HOH A 70 680 680 HOH HOH . E 5 HOH A 71 681 681 HOH HOH . E 5 HOH A 72 682 682 HOH HOH . E 5 HOH A 73 683 683 HOH HOH . E 5 HOH A 74 684 684 HOH HOH . E 5 HOH A 75 685 685 HOH HOH . E 5 HOH A 76 686 686 HOH HOH . E 5 HOH A 77 687 687 HOH HOH . E 5 HOH A 78 688 688 HOH HOH . E 5 HOH A 79 690 690 HOH HOH . E 5 HOH A 80 691 691 HOH HOH . E 5 HOH A 81 692 692 HOH HOH . E 5 HOH A 82 693 693 HOH HOH . E 5 HOH A 83 694 694 HOH HOH . E 5 HOH A 84 695 695 HOH HOH . E 5 HOH A 85 696 696 HOH HOH . E 5 HOH A 86 697 697 HOH HOH . E 5 HOH A 87 698 698 HOH HOH . E 5 HOH A 88 699 699 HOH HOH . E 5 HOH A 89 700 700 HOH HOH . E 5 HOH A 90 701 701 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x 32.586 _atom_site.Cartn_y 34.059 _atom_site.Cartn_z 39.322 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.81 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 536 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #