data_3MCO # _model_server_result.job_id F9yMVfOM8xBCccK3TwmHKA _model_server_result.datetime_utc '2024-11-26 14:32:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mco # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":427}' # _entry.id 3MCO # _exptl.entry_id 3MCO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 82 _cell.angle_beta 81 _cell.angle_gamma 68.08 _cell.entry_id 3MCO _cell.length_a 42.521 _cell.length_b 58.472 _cell.length_c 109.327 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MCO _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,M 1 1 B,H,I,J,K,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 121 A ASP 101 1_555 F MG MG . A MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.522 ? metalc ? metalc2 A OD2 ASP 121 A ASP 101 1_555 G MG MG . A MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc3 A OD1 ASP 123 A ASP 103 1_555 F MG MG . A MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc4 A OD2 ASP 123 A ASP 103 1_555 G MG MG . A MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.334 ? metalc ? metalc5 C O4 PH2 . A PH2 423 1_555 G MG MG . A MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc6 E O1B APC . A APC 425 1_555 F MG MG . A MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc7 E O1A APC . A APC 425 1_555 F MG MG . A MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.271 ? metalc ? metalc8 E O3G APC . A APC 425 1_555 G MG MG . A MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.179 ? metalc ? metalc9 E O1B APC . A APC 425 1_555 G MG MG . A MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc10 F MG MG . A MG 426 1_555 M O HOH . A HOH 456 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc11 B OD1 ASP 121 B ASP 101 1_555 K MG MG . B MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc12 B OD2 ASP 121 B ASP 101 1_555 L MG MG . B MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc13 B OD1 ASP 123 B ASP 103 1_555 K MG MG . B MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.362 ? metalc ? metalc14 B OD2 ASP 123 B ASP 103 1_555 L MG MG . B MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.493 ? metalc ? metalc15 H O4 PH2 . B PH2 423 1_555 L MG MG . B MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc16 J O1B APC . B APC 425 1_555 K MG MG . B MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? metalc ? metalc17 J O1A APC . B APC 425 1_555 K MG MG . B MG 426 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.198 ? metalc ? metalc18 J O3G APC . B APC 425 1_555 L MG MG . B MG 427 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc19 K MG MG . B MG 426 1_555 N O HOH . B HOH 438 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3MCO _atom_sites.fract_transf_matrix[1][1] 0.023518 _atom_sites.fract_transf_matrix[1][2] -0.009462 _atom_sites.fract_transf_matrix[1][3] -0.002905 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018435 _atom_sites.fract_transf_matrix[2][3] -0.00163 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009297 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 PH2 A 1 423 1 PH2 PH2 . D 2 PH2 A 1 424 2 PH2 PH2 . E 3 APC A 1 425 1 APC APC . F 4 MG A 1 426 1 MG MG . G 4 MG A 1 427 3 MG MG . H 2 PH2 B 1 423 3 PH2 PH2 . I 2 PH2 B 1 424 4 PH2 PH2 . J 3 APC B 1 425 2 APC APC . K 4 MG B 1 426 2 MG MG . L 4 MG B 1 427 4 MG MG . M 5 HOH A 1 428 1 HOH HOH . M 5 HOH A 2 429 3 HOH HOH . M 5 HOH A 3 430 4 HOH HOH . M 5 HOH A 4 431 7 HOH HOH . M 5 HOH A 5 432 8 HOH HOH . M 5 HOH A 6 433 10 HOH HOH . M 5 HOH A 7 434 13 HOH HOH . M 5 HOH A 8 435 18 HOH HOH . M 5 HOH A 9 436 19 HOH HOH . M 5 HOH A 10 437 22 HOH HOH . M 5 HOH A 11 438 26 HOH HOH . M 5 HOH A 12 439 27 HOH HOH . M 5 HOH A 13 440 29 HOH HOH . M 5 HOH A 14 441 30 HOH HOH . M 5 HOH A 15 442 32 HOH HOH . M 5 HOH A 16 443 33 HOH HOH . M 5 HOH A 17 444 37 HOH HOH . M 5 HOH A 18 445 38 HOH HOH . M 5 HOH A 19 446 39 HOH HOH . M 5 HOH A 20 447 41 HOH HOH . M 5 HOH A 21 448 43 HOH HOH . M 5 HOH A 22 449 45 HOH HOH . M 5 HOH A 23 450 46 HOH HOH . M 5 HOH A 24 451 48 HOH HOH . M 5 HOH A 25 452 49 HOH HOH . M 5 HOH A 26 453 52 HOH HOH . M 5 HOH A 27 454 55 HOH HOH . M 5 HOH A 28 455 56 HOH HOH . M 5 HOH A 29 456 58 HOH HOH . N 5 HOH B 1 428 2 HOH HOH . N 5 HOH B 2 429 5 HOH HOH . N 5 HOH B 3 430 6 HOH HOH . N 5 HOH B 4 431 9 HOH HOH . N 5 HOH B 5 432 11 HOH HOH . N 5 HOH B 6 433 12 HOH HOH . N 5 HOH B 7 434 14 HOH HOH . N 5 HOH B 8 435 15 HOH HOH . N 5 HOH B 9 436 16 HOH HOH . N 5 HOH B 10 437 17 HOH HOH . N 5 HOH B 11 438 20 HOH HOH . N 5 HOH B 12 439 21 HOH HOH . N 5 HOH B 13 440 23 HOH HOH . N 5 HOH B 14 441 24 HOH HOH . N 5 HOH B 15 442 25 HOH HOH . N 5 HOH B 16 443 28 HOH HOH . N 5 HOH B 17 444 31 HOH HOH . N 5 HOH B 18 445 34 HOH HOH . N 5 HOH B 19 446 35 HOH HOH . N 5 HOH B 20 447 40 HOH HOH . N 5 HOH B 21 448 42 HOH HOH . N 5 HOH B 22 449 44 HOH HOH . N 5 HOH B 23 450 47 HOH HOH . N 5 HOH B 24 451 50 HOH HOH . N 5 HOH B 25 452 51 HOH HOH . N 5 HOH B 26 453 53 HOH HOH . N 5 HOH B 27 454 54 HOH HOH . N 5 HOH B 28 455 57 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x -14.978 _atom_site.Cartn_y -37.069 _atom_site.Cartn_z -70.388 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 35.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 427 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #