data_3MEG # _model_server_result.job_id -KzlDHgTA26ObOOKokMHlw _model_server_result.datetime_utc '2024-12-15 10:02:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3meg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":561}' # _entry.id 3MEG # _exptl.entry_id 3MEG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 366.419 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MEG _cell.length_a 119.583 _cell.length_b 154.909 _cell.length_c 153.722 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MEG _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H18 N6' _chem_comp.formula_weight 366.419 _chem_comp.id T27 _chem_comp.mon_nstd_flag . _chem_comp.name 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Rilpivirine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C6 T27 doub 294 n y C1 C7 T27 sing 295 n n C1 C2 T27 sing 296 n y N2 C9 T27 doub 297 n y N2 C12 T27 sing 298 n y C3 C4 T27 sing 299 n y C3 C2 T27 doub 300 n y C3 C21 T27 sing 301 n n C4 C5 T27 doub 302 n y C5 C6 T27 sing 303 n y C5 C8 T27 sing 304 n n C6 N1 T27 sing 305 n n N1 C11 T27 sing 306 n n C9 C10 T27 sing 307 n y C10 C11 T27 doub 308 n y C11 N3 T27 sing 309 n y N3 C12 T27 doub 310 n y C12 N4 T27 sing 311 n n N4 C16 T27 sing 312 n n C13 C14 T27 doub 313 n y C13 C18 T27 sing 314 n y C13 C19 T27 sing 315 n n C14 C15 T27 sing 316 n y C15 C16 T27 doub 317 n y C16 C17 T27 sing 318 n y C17 C18 T27 doub 319 n y N5 C19 T27 trip 320 n n C20 C21 T27 doub 321 e n C20 C22 T27 sing 322 n n N6 C22 T27 trip 323 n n C4 H4 T27 sing 324 n n C7 H7 T27 sing 325 n n C7 H7A T27 sing 326 n n C7 H7B T27 sing 327 n n C2 H2 T27 sing 328 n n C8 H8 T27 sing 329 n n C8 H8A T27 sing 330 n n C8 H8B T27 sing 331 n n N1 HN1 T27 sing 332 n n C9 H9 T27 sing 333 n n C10 H10 T27 sing 334 n n N4 HN4 T27 sing 335 n n C14 H14 T27 sing 336 n n C15 H15 T27 sing 337 n n C17 H17 T27 sing 338 n n C18 H18 T27 sing 339 n n C20 H20 T27 sing 340 n n C21 H21 T27 sing 341 n n # _atom_sites.entry_id 3MEG _atom_sites.fract_transf_matrix[1][1] 0.008362 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006455 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006505 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 T27 A 1 561 1 T27 T27 . D 4 SO4 A 1 562 201 SO4 SO4 . E 4 SO4 A 1 563 202 SO4 SO4 . F 4 SO4 A 1 564 203 SO4 SO4 . G 4 SO4 A 1 565 204 SO4 SO4 . H 4 SO4 B 1 441 205 SO4 SO4 . I 5 HOH A 1 566 2 HOH HOH . I 5 HOH A 2 567 3 HOH HOH . I 5 HOH A 3 568 5 HOH HOH . I 5 HOH A 4 569 6 HOH HOH . I 5 HOH A 5 570 7 HOH HOH . I 5 HOH A 6 571 8 HOH HOH . I 5 HOH A 7 572 11 HOH HOH . I 5 HOH A 8 573 15 HOH HOH . J 5 HOH B 1 442 1 HOH HOH . J 5 HOH B 2 443 4 HOH HOH . J 5 HOH B 3 444 9 HOH HOH . J 5 HOH B 4 445 10 HOH HOH . J 5 HOH B 5 446 12 HOH HOH . J 5 HOH B 6 447 13 HOH HOH . J 5 HOH B 7 448 14 HOH HOH . J 5 HOH B 8 449 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 T27 . . . C 3 12.452 13.411 17.715 1 55.72 ? C1 T27 561 A 1 HETATM 2 N N2 T27 . . . C 3 11.109 15.8 12.862 1 42.07 ? N2 T27 561 A 1 HETATM 3 C C3 T27 . . . C 3 11.246 13.881 19.854 1 58.98 ? C3 T27 561 A 1 HETATM 4 C C4 T27 . . . C 3 11.466 15.291 19.708 1 56.89 ? C4 T27 561 A 1 HETATM 5 C C5 T27 . . . C 3 12.177 15.792 18.56 1 55.97 ? C5 T27 561 A 1 HETATM 6 C C6 T27 . . . C 3 12.682 14.862 17.534 1 55.3 ? C6 T27 561 A 1 HETATM 7 C C7 T27 . . . C 3 12.939 12.36 16.717 1 55.71 ? C7 T27 561 A 1 HETATM 8 C C2 T27 . . . C 3 11.746 12.953 18.853 1 56.26 ? C2 T27 561 A 1 HETATM 9 C C8 T27 . . . C 3 12.388 17.287 18.433 1 54.61 ? C8 T27 561 A 1 HETATM 10 N N1 T27 . . . C 3 13.357 15.35 16.423 1 51.27 ? N1 T27 561 A 1 HETATM 11 C C9 T27 . . . C 3 12.339 16.519 13.013 1 42.46 ? C9 T27 561 A 1 HETATM 12 C C10 T27 . . . C 3 13.119 16.394 14.195 1 44.04 ? C10 T27 561 A 1 HETATM 13 C C11 T27 . . . C 3 12.642 15.53 15.231 1 47.42 ? C11 T27 561 A 1 HETATM 14 N N3 T27 . . . C 3 11.418 14.817 15.07 1 42.84 ? N3 T27 561 A 1 HETATM 15 C C12 T27 . . . C 3 10.625 14.93 13.902 1 44.19 ? C12 T27 561 A 1 HETATM 16 N N4 T27 . . . C 3 9.404 14.22 13.733 1 40.64 ? N4 T27 561 A 1 HETATM 17 C C13 T27 . . . C 3 7.458 11.429 16.371 1 39.46 ? C13 T27 561 A 1 HETATM 18 C C14 T27 . . . C 3 8.682 12.038 16.77 1 36.97 ? C14 T27 561 A 1 HETATM 19 C C15 T27 . . . C 3 9.325 12.963 15.907 1 38.78 ? C15 T27 561 A 1 HETATM 20 C C16 T27 . . . C 3 8.779 13.322 14.608 1 38.37 ? C16 T27 561 A 1 HETATM 21 C C17 T27 . . . C 3 7.533 12.714 14.206 1 38.97 ? C17 T27 561 A 1 HETATM 22 C C18 T27 . . . C 3 6.865 11.763 15.082 1 38.86 ? C18 T27 561 A 1 HETATM 23 N N5 T27 . . . C 3 6.343 9.738 17.995 1 41.14 ? N5 T27 561 A 1 HETATM 24 C C19 T27 . . . C 3 6.834 10.485 17.262 1 39.37 ? C19 T27 561 A 1 HETATM 25 C C20 T27 . . . C 3 10.254 12.049 21.22 1 66.96 ? C20 T27 561 A 1 HETATM 26 C C21 T27 . . . C 3 10.489 13.364 21.056 1 63.17 ? C21 T27 561 A 1 HETATM 27 N N6 T27 . . . C 3 9.035 11.251 23.351 1 76.77 ? N6 T27 561 A 1 HETATM 28 C C22 T27 . . . C 3 9.56 11.605 22.382 1 71.82 ? C22 T27 561 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 28 #