data_3MET # _model_server_result.job_id BsiZWJnwkavRxh6E_tAbOQ _model_server_result.datetime_utc '2024-11-16 09:36:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3met # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1}' # _entry.id 3MET # _exptl.entry_id 3MET _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MET _cell.length_a 50.162 _cell.length_b 65.411 _cell.length_c 105.877 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MET _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 PISA dimeric 2 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,J,K,M 1 1 B,D,G,H,I,L,N 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 6 A LEU 119 1_555 A N MSE 7 A MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale2 A C MSE 7 A MSE 120 1_555 A N THR 8 A THR 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale3 A C ALA 14 A ALA 127 1_555 A N MSE 15 A MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale4 A C MSE 15 A MSE 128 1_555 A N THR 16 A THR 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale5 B C LEU 6 B LEU 119 1_555 B N MSE 7 B MSE 120 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 B C MSE 7 B MSE 120 1_555 B N THR 8 B THR 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale7 B C ALA 14 B ALA 127 1_555 B N MSE 15 B MSE 128 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale8 B C MSE 15 B MSE 128 1_555 B N THR 16 B THR 129 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 C C THR 3 C THR 3 1_555 C N MLY 4 C MLY 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 C C MLY 4 C MLY 4 1_555 C N GLN 5 C GLN 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 D C THR 3 D THR 3 1_555 D N MLY 4 D MLY 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.32 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # _atom_sites.entry_id 3MET _atom_sites.fract_transf_matrix[1][1] 0.019935 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015288 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 UNX A 1 1 1 UNX UNX . F 3 UNX A 1 2 2 UNX UNX . G 4 GOL B 1 1 1 GOL GOL . H 5 SO4 B 1 2 2 SO4 SO4 . I 3 UNX B 1 3 3 UNX UNX . J 5 SO4 C 1 12 1 SO4 SO4 . K 6 HOH A 1 3 3 HOH HOH . K 6 HOH A 2 9 9 HOH HOH . K 6 HOH A 3 14 14 HOH HOH . K 6 HOH A 4 15 15 HOH HOH . K 6 HOH A 5 17 17 HOH HOH . K 6 HOH A 6 18 18 HOH HOH . K 6 HOH A 7 19 19 HOH HOH . K 6 HOH A 8 20 20 HOH HOH . K 6 HOH A 9 24 24 HOH HOH . K 6 HOH A 10 29 29 HOH HOH . K 6 HOH A 11 30 30 HOH HOH . K 6 HOH A 12 32 32 HOH HOH . K 6 HOH A 13 33 33 HOH HOH . K 6 HOH A 14 36 36 HOH HOH . K 6 HOH A 15 37 37 HOH HOH . K 6 HOH A 16 43 43 HOH HOH . K 6 HOH A 17 47 47 HOH HOH . K 6 HOH A 18 48 48 HOH HOH . K 6 HOH A 19 49 49 HOH HOH . K 6 HOH A 20 52 52 HOH HOH . K 6 HOH A 21 56 56 HOH HOH . K 6 HOH A 22 58 58 HOH HOH . K 6 HOH A 23 59 59 HOH HOH . K 6 HOH A 24 60 60 HOH HOH . K 6 HOH A 25 61 61 HOH HOH . K 6 HOH A 26 63 63 HOH HOH . K 6 HOH A 27 64 64 HOH HOH . K 6 HOH A 28 66 66 HOH HOH . K 6 HOH A 29 67 67 HOH HOH . K 6 HOH A 30 70 70 HOH HOH . K 6 HOH A 31 71 71 HOH HOH . K 6 HOH A 32 72 72 HOH HOH . K 6 HOH A 33 76 76 HOH HOH . K 6 HOH A 34 77 77 HOH HOH . K 6 HOH A 35 78 78 HOH HOH . K 6 HOH A 36 79 79 HOH HOH . K 6 HOH A 37 81 81 HOH HOH . K 6 HOH A 38 83 83 HOH HOH . K 6 HOH A 39 86 86 HOH HOH . K 6 HOH A 40 92 92 HOH HOH . K 6 HOH A 41 93 93 HOH HOH . K 6 HOH A 42 94 94 HOH HOH . K 6 HOH A 43 96 96 HOH HOH . K 6 HOH A 44 98 98 HOH HOH . K 6 HOH A 45 104 104 HOH HOH . K 6 HOH A 46 105 105 HOH HOH . K 6 HOH A 47 106 106 HOH HOH . K 6 HOH A 48 107 107 HOH HOH . K 6 HOH A 49 108 108 HOH HOH . K 6 HOH A 50 109 109 HOH HOH . K 6 HOH A 51 110 110 HOH HOH . K 6 HOH A 52 294 2 HOH HOH . K 6 HOH A 53 295 295 HOH HOH . K 6 HOH A 54 296 114 HOH HOH . K 6 HOH A 55 297 117 HOH HOH . K 6 HOH A 56 298 119 HOH HOH . K 6 HOH A 57 299 126 HOH HOH . K 6 HOH A 58 300 129 HOH HOH . K 6 HOH A 59 301 130 HOH HOH . K 6 HOH A 60 302 131 HOH HOH . K 6 HOH A 61 303 134 HOH HOH . K 6 HOH A 62 304 135 HOH HOH . K 6 HOH A 63 305 136 HOH HOH . K 6 HOH A 64 306 139 HOH HOH . K 6 HOH A 65 307 140 HOH HOH . K 6 HOH A 66 308 142 HOH HOH . K 6 HOH A 67 309 143 HOH HOH . K 6 HOH A 68 310 146 HOH HOH . K 6 HOH A 69 311 148 HOH HOH . K 6 HOH A 70 312 312 HOH HOH . K 6 HOH A 71 313 313 HOH HOH . K 6 HOH A 72 314 149 HOH HOH . K 6 HOH A 73 315 150 HOH HOH . K 6 HOH A 74 316 151 HOH HOH . K 6 HOH A 75 317 153 HOH HOH . K 6 HOH A 76 318 154 HOH HOH . K 6 HOH A 77 319 155 HOH HOH . K 6 HOH A 78 320 156 HOH HOH . K 6 HOH A 79 321 157 HOH HOH . K 6 HOH A 80 322 158 HOH HOH . K 6 HOH A 81 323 163 HOH HOH . K 6 HOH A 82 324 167 HOH HOH . K 6 HOH A 83 325 172 HOH HOH . K 6 HOH A 84 326 174 HOH HOH . K 6 HOH A 85 327 177 HOH HOH . K 6 HOH A 86 328 180 HOH HOH . K 6 HOH A 87 329 193 HOH HOH . K 6 HOH A 88 330 194 HOH HOH . K 6 HOH A 89 331 331 HOH HOH . K 6 HOH A 90 332 332 HOH HOH . K 6 HOH A 91 333 333 HOH HOH . K 6 HOH A 92 334 334 HOH HOH . K 6 HOH A 93 335 335 HOH HOH . K 6 HOH A 94 336 336 HOH HOH . K 6 HOH A 95 337 337 HOH HOH . K 6 HOH A 96 338 195 HOH HOH . K 6 HOH A 97 339 339 HOH HOH . K 6 HOH A 98 340 196 HOH HOH . K 6 HOH A 99 341 197 HOH HOH . K 6 HOH A 100 342 198 HOH HOH . K 6 HOH A 101 343 200 HOH HOH . K 6 HOH A 102 344 201 HOH HOH . K 6 HOH A 103 345 203 HOH HOH . K 6 HOH A 104 346 210 HOH HOH . K 6 HOH A 105 347 213 HOH HOH . K 6 HOH A 106 348 221 HOH HOH . K 6 HOH A 107 349 222 HOH HOH . K 6 HOH A 108 350 229 HOH HOH . K 6 HOH A 109 351 240 HOH HOH . L 6 HOH B 1 4 4 HOH HOH . L 6 HOH B 2 6 6 HOH HOH . L 6 HOH B 3 8 8 HOH HOH . L 6 HOH B 4 11 11 HOH HOH . L 6 HOH B 5 12 12 HOH HOH . L 6 HOH B 6 13 13 HOH HOH . L 6 HOH B 7 16 16 HOH HOH . L 6 HOH B 8 21 21 HOH HOH . L 6 HOH B 9 22 22 HOH HOH . L 6 HOH B 10 23 23 HOH HOH . L 6 HOH B 11 25 25 HOH HOH . L 6 HOH B 12 26 26 HOH HOH . L 6 HOH B 13 31 31 HOH HOH . L 6 HOH B 14 35 35 HOH HOH . L 6 HOH B 15 38 38 HOH HOH . L 6 HOH B 16 41 41 HOH HOH . L 6 HOH B 17 42 42 HOH HOH . L 6 HOH B 18 44 44 HOH HOH . L 6 HOH B 19 45 45 HOH HOH . L 6 HOH B 20 51 51 HOH HOH . L 6 HOH B 21 53 53 HOH HOH . L 6 HOH B 22 54 54 HOH HOH . L 6 HOH B 23 57 57 HOH HOH . L 6 HOH B 24 62 62 HOH HOH . L 6 HOH B 25 65 65 HOH HOH . L 6 HOH B 26 69 69 HOH HOH . L 6 HOH B 27 73 73 HOH HOH . L 6 HOH B 28 74 74 HOH HOH . L 6 HOH B 29 80 80 HOH HOH . L 6 HOH B 30 82 82 HOH HOH . L 6 HOH B 31 88 88 HOH HOH . L 6 HOH B 32 89 89 HOH HOH . L 6 HOH B 33 91 91 HOH HOH . L 6 HOH B 34 95 95 HOH HOH . L 6 HOH B 35 97 97 HOH HOH . L 6 HOH B 36 99 99 HOH HOH . L 6 HOH B 37 100 100 HOH HOH . L 6 HOH B 38 101 101 HOH HOH . L 6 HOH B 39 102 102 HOH HOH . L 6 HOH B 40 103 103 HOH HOH . L 6 HOH B 41 294 1 HOH HOH . L 6 HOH B 42 295 115 HOH HOH . L 6 HOH B 43 296 116 HOH HOH . L 6 HOH B 44 297 118 HOH HOH . L 6 HOH B 45 298 120 HOH HOH . L 6 HOH B 46 299 121 HOH HOH . L 6 HOH B 47 300 122 HOH HOH . L 6 HOH B 48 301 125 HOH HOH . L 6 HOH B 49 302 127 HOH HOH . L 6 HOH B 50 303 128 HOH HOH . L 6 HOH B 51 304 132 HOH HOH . L 6 HOH B 52 305 137 HOH HOH . L 6 HOH B 53 306 306 HOH HOH . L 6 HOH B 54 307 138 HOH HOH . L 6 HOH B 55 308 308 HOH HOH . L 6 HOH B 56 309 159 HOH HOH . L 6 HOH B 57 310 160 HOH HOH . L 6 HOH B 58 311 162 HOH HOH . L 6 HOH B 59 312 164 HOH HOH . L 6 HOH B 60 313 169 HOH HOH . L 6 HOH B 61 314 314 HOH HOH . L 6 HOH B 62 315 170 HOH HOH . L 6 HOH B 63 316 173 HOH HOH . L 6 HOH B 64 317 175 HOH HOH . L 6 HOH B 65 318 318 HOH HOH . L 6 HOH B 66 319 179 HOH HOH . L 6 HOH B 67 320 182 HOH HOH . L 6 HOH B 68 321 202 HOH HOH . L 6 HOH B 69 322 216 HOH HOH . L 6 HOH B 70 323 217 HOH HOH . L 6 HOH B 71 324 218 HOH HOH . L 6 HOH B 72 325 246 HOH HOH . L 6 HOH B 73 326 254 HOH HOH . L 6 HOH B 74 327 268 HOH HOH . L 6 HOH B 75 328 271 HOH HOH . L 6 HOH B 76 329 282 HOH HOH . L 6 HOH B 77 340 340 HOH HOH . L 6 HOH B 78 341 341 HOH HOH . L 6 HOH B 79 342 342 HOH HOH . L 6 HOH B 80 343 343 HOH HOH . L 6 HOH B 81 344 344 HOH HOH . L 6 HOH B 82 345 345 HOH HOH . L 6 HOH B 83 346 346 HOH HOH . L 6 HOH B 84 347 347 HOH HOH . M 6 HOH C 1 39 39 HOH HOH . M 6 HOH C 2 161 161 HOH HOH . M 6 HOH C 3 184 184 HOH HOH . N 6 HOH D 1 90 90 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . G 4 -32.063 15.172 -38.383 1 14 ? C1 GOL 1 B 1 HETATM 2 O O1 GOL . . . G 4 -30.868 15.839 -38.706 1 9.78 ? O1 GOL 1 B 1 HETATM 3 C C2 GOL . . . G 4 -32.856 16.016 -37.389 1 15.86 ? C2 GOL 1 B 1 HETATM 4 O O2 GOL . . . G 4 -33.247 17.19 -38.025 1 15.87 ? O2 GOL 1 B 1 HETATM 5 C C3 GOL . . . G 4 -34.043 15.166 -36.979 1 17.31 ? C3 GOL 1 B 1 HETATM 6 O O3 GOL . . . G 4 -34.809 15.748 -35.985 1 20.67 ? O3 GOL 1 B 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 5 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 6 #