data_3MI7 # _model_server_result.job_id dM6qLnFiTcXCt1vj75d3kw _model_server_result.datetime_utc '2024-12-27 19:31:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mi7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":4}' # _entry.id 3MI7 # _exptl.entry_id 3MI7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 120.53 _cell.angle_gamma 90 _cell.entry_id 3MI7 _cell.length_a 59.86 _cell.length_b 43.099 _cell.length_c 45.666 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MI7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 36.662154 0 39.335016 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3MI7 _atom_sites.fract_transf_matrix[1][1] 0.016706 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009853 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023202 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025423 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO X 1 1 1 EDO EDO . C 2 EDO X 1 2 2 EDO EDO . D 2 EDO X 1 3 3 EDO EDO . E 2 EDO X 1 4 4 EDO EDO . F 2 EDO X 1 5 5 EDO EDO . G 2 EDO X 1 6 6 EDO EDO . H 3 HOH X 1 7 7 HOH HOH . H 3 HOH X 2 8 8 HOH HOH . H 3 HOH X 3 9 9 HOH HOH . H 3 HOH X 4 10 10 HOH HOH . H 3 HOH X 5 11 11 HOH HOH . H 3 HOH X 6 12 12 HOH HOH . H 3 HOH X 7 13 13 HOH HOH . H 3 HOH X 8 14 14 HOH HOH . H 3 HOH X 9 15 15 HOH HOH . H 3 HOH X 10 16 16 HOH HOH . H 3 HOH X 11 17 17 HOH HOH . H 3 HOH X 12 18 18 HOH HOH . H 3 HOH X 13 19 19 HOH HOH . H 3 HOH X 14 20 20 HOH HOH . H 3 HOH X 15 21 21 HOH HOH . H 3 HOH X 16 22 22 HOH HOH . H 3 HOH X 17 23 23 HOH HOH . H 3 HOH X 18 24 24 HOH HOH . H 3 HOH X 19 25 25 HOH HOH . H 3 HOH X 20 26 26 HOH HOH . H 3 HOH X 21 27 27 HOH HOH . H 3 HOH X 22 28 28 HOH HOH . H 3 HOH X 23 29 29 HOH HOH . H 3 HOH X 24 30 30 HOH HOH . H 3 HOH X 25 31 31 HOH HOH . H 3 HOH X 26 32 32 HOH HOH . H 3 HOH X 27 33 33 HOH HOH . H 3 HOH X 28 34 34 HOH HOH . H 3 HOH X 29 35 35 HOH HOH . H 3 HOH X 30 36 36 HOH HOH . H 3 HOH X 31 37 37 HOH HOH . H 3 HOH X 32 38 38 HOH HOH . H 3 HOH X 33 39 39 HOH HOH . H 3 HOH X 34 40 40 HOH HOH . H 3 HOH X 35 41 41 HOH HOH . H 3 HOH X 36 42 42 HOH HOH . H 3 HOH X 37 43 43 HOH HOH . H 3 HOH X 38 44 44 HOH HOH . H 3 HOH X 39 45 45 HOH HOH . H 3 HOH X 40 46 46 HOH HOH . H 3 HOH X 41 47 47 HOH HOH . H 3 HOH X 42 48 48 HOH HOH . H 3 HOH X 43 49 49 HOH HOH . H 3 HOH X 44 50 50 HOH HOH . H 3 HOH X 45 51 51 HOH HOH . H 3 HOH X 46 52 52 HOH HOH . H 3 HOH X 47 53 53 HOH HOH . H 3 HOH X 48 54 54 HOH HOH . H 3 HOH X 49 55 55 HOH HOH . H 3 HOH X 50 56 56 HOH HOH . H 3 HOH X 51 57 57 HOH HOH . H 3 HOH X 52 58 58 HOH HOH . H 3 HOH X 53 59 59 HOH HOH . H 3 HOH X 54 60 60 HOH HOH . H 3 HOH X 55 61 61 HOH HOH . H 3 HOH X 56 62 62 HOH HOH . H 3 HOH X 57 63 63 HOH HOH . H 3 HOH X 58 64 64 HOH HOH . H 3 HOH X 59 65 65 HOH HOH . H 3 HOH X 60 66 66 HOH HOH . H 3 HOH X 61 67 67 HOH HOH . H 3 HOH X 62 68 68 HOH HOH . H 3 HOH X 63 69 69 HOH HOH . H 3 HOH X 64 70 70 HOH HOH . H 3 HOH X 65 71 71 HOH HOH . H 3 HOH X 66 72 72 HOH HOH . H 3 HOH X 67 366 1 HOH HOH . H 3 HOH X 68 367 2 HOH HOH . H 3 HOH X 69 368 3 HOH HOH . H 3 HOH X 70 369 4 HOH HOH . H 3 HOH X 71 370 5 HOH HOH . H 3 HOH X 72 371 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 2 14.389 11.224 22.251 1 45.23 ? C1 EDO 4 X 1 HETATM 2 O O1 EDO . . . E 2 14.636 10.829 20.905 1 43.3 ? O1 EDO 4 X 1 HETATM 3 C C2 EDO . . . E 2 12.932 10.93 22.566 1 46.97 ? C2 EDO 4 X 1 HETATM 4 O O2 EDO . . . E 2 12.582 11.486 23.835 1 49.58 ? O2 EDO 4 X 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 285 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #