data_3MIA # _model_server_result.job_id uS-gQqjVTDyWFImuWj3TLw _model_server_result.datetime_utc '2024-11-05 23:35:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mia # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":87}' # _entry.id 3MIA # _exptl.entry_id 3MIA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3MIA _cell.length_a 134.286 _cell.length_b 134.286 _cell.length_c 97.185 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MIA _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 F N N ? 6 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 C SG CYS 25 C CYS 25 1_555 C SG CYS 27 C CYS 27 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.82 ? disulf ? disulf2 C SG CYS 25 C CYS 25 1_555 C SG CYS 30 C CYS 30 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.995 ? covale ? covale1 A C TYR 185 A TYR 185 1_555 A N TPO 186 A TPO 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 A C TPO 186 A TPO 186 1_555 A N ASN 187 A ASN 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? metalc ? metalc1 A OD1 ASN 154 A ASN 154 1_555 E MG MG . A MG 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.971 ? metalc ? metalc2 A OD2 ASP 167 A ASP 167 1_555 E MG MG . A MG 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.301 ? metalc ? metalc3 D O2A ANP . A ANP 352 1_555 E MG MG . A MG 353 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc4 B SG CYS 261 B CYS 261 1_555 G ZN ZN . C ZN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc5 C SG CYS 22 C CYS 22 1_555 F ZN ZN . C ZN 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc6 C SG CYS 25 C CYS 25 1_555 G ZN ZN . C ZN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc7 C SG CYS 27 C CYS 27 1_555 G ZN ZN . C ZN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc8 C SG CYS 30 C CYS 30 1_555 G ZN ZN . C ZN 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc9 C ND1 HIS 33 C HIS 33 1_555 F ZN ZN . C ZN 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc10 C SG CYS 34 C CYS 34 1_555 F ZN ZN . C ZN 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? metalc ? metalc11 C SG CYS 37 C CYS 37 1_555 F ZN ZN . C ZN 87 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3MIA _atom_sites.fract_transf_matrix[1][1] 0.007447 _atom_sites.fract_transf_matrix[1][2] 0.004299 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008599 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01029 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ANP A 1 352 1 ANP ANP . E 5 MG A 1 353 1 MG MG . F 6 ZN C 1 87 1 ZN ZN . G 6 ZN C 1 88 2 ZN ZN . H 7 HOH A 1 354 2 HOH H2O . H 7 HOH A 2 355 3 HOH H2O . H 7 HOH A 3 356 4 HOH H2O . H 7 HOH A 4 357 5 HOH H2O . H 7 HOH A 5 358 6 HOH H2O . H 7 HOH A 6 359 7 HOH H2O . H 7 HOH A 7 360 8 HOH H2O . H 7 HOH A 8 361 9 HOH H2O . H 7 HOH A 9 362 11 HOH H2O . H 7 HOH A 10 363 12 HOH H2O . H 7 HOH A 11 364 13 HOH H2O . H 7 HOH A 12 365 14 HOH H2O . H 7 HOH A 13 366 15 HOH H2O . H 7 HOH A 14 367 16 HOH H2O . H 7 HOH A 15 368 17 HOH H2O . H 7 HOH A 16 369 18 HOH H2O . H 7 HOH A 17 370 19 HOH H2O . H 7 HOH A 18 371 20 HOH H2O . H 7 HOH A 19 372 22 HOH H2O . H 7 HOH A 20 373 23 HOH H2O . H 7 HOH A 21 374 24 HOH H2O . H 7 HOH A 22 375 25 HOH H2O . H 7 HOH A 23 376 26 HOH H2O . H 7 HOH A 24 377 27 HOH H2O . I 7 HOH B 1 267 1 HOH H2O . I 7 HOH B 2 268 10 HOH H2O . I 7 HOH B 3 269 21 HOH H2O . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id F _atom_site.label_entity_id 6 _atom_site.Cartn_x 13.302 _atom_site.Cartn_y 30.723 _atom_site.Cartn_z 28.783 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 82.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 87 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 18 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 345 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #