data_3MJR
#
_model_server_result.job_id            K9R8kV8CRI6dnbYHZ5bnDQ 
_model_server_result.datetime_utc      '2024-10-13 00:21:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3mjr 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":601}' 
#
_entry.id    3MJR 
#
_exptl.entry_id    3MJR 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              225.205 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            9-HYROXYETHOXYMETHYLGUANINE 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3MJR 
_cell.length_a            97.31 
_cell.length_b            97.31 
_cell.length_c            121.5 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3MJR 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,H,L,M 1 1 
C,D,I,J,K,N,O 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 J N N 
#
_chem_comp.formula           'C8 H11 N5 O3' 
_chem_comp.formula_weight    225.205 
_chem_comp.id                AC2 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              9-HYROXYETHOXYMETHYLGUANINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C3' O3' AC2 sing 1 n n 
C3' C2' AC2 sing 2 n n 
C3' "H3'1" AC2 sing 3 n n 
C3' "H3'2" AC2 sing 4 n n 
O3' "HO'3" AC2 sing 5 n n 
C2' O1' AC2 sing 6 n n 
C2' "H2'1" AC2 sing 7 n n 
C2' "H2'2" AC2 sing 8 n n 
O1' C1' AC2 sing 9 n n 
C1' N9 AC2 sing 10 n n 
C1' "H1'1" AC2 sing 11 n n 
C1' "H1'2" AC2 sing 12 n n 
N9 C8 AC2 sing 13 n y 
N9 C4 AC2 sing 14 n y 
C8 N7 AC2 doub 15 n y 
C8 H8 AC2 sing 16 n n 
N7 C5 AC2 sing 17 n y 
C5 C6 AC2 sing 18 n n 
C5 C4 AC2 doub 19 n y 
C6 O6 AC2 doub 20 n n 
C6 N1 AC2 sing 21 n n 
N1 C2 AC2 sing 22 n n 
N1 HN1 AC2 sing 23 n n 
C2 N2 AC2 sing 24 n n 
C2 N3 AC2 doub 25 n n 
N2 HN21 AC2 sing 26 n n 
N2 HN22 AC2 sing 27 n n 
N3 C4 AC2 sing 28 n n 
#
_atom_sites.entry_id                     3MJR 
_atom_sites.fract_transf_matrix[1][1]    0.010276 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010276 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00823 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 AC2 A 1 301 301 AC2 AC2 . 
F 3 UDP A 1 261 301 UDP UDP . 
G 2 AC2 B 1 401 401 AC2 AC2 . 
H 3 UDP B 1 261 401 UDP UDP . 
I 3 UDP C 1 501 501 UDP UDP . 
J 2 AC2 D 1 601 601 AC2 AC2 . 
K 3 UDP D 1 261 601 UDP UDP . 
L 4 HOH A 1 262 5 HOH HOH . 
L 4 HOH A 2 263 7 HOH HOH . 
L 4 HOH A 3 264 10 HOH HOH . 
L 4 HOH A 4 265 14 HOH HOH . 
L 4 HOH A 5 266 20 HOH HOH . 
L 4 HOH A 6 267 21 HOH HOH . 
L 4 HOH A 7 268 27 HOH HOH . 
L 4 HOH A 8 269 29 HOH HOH . 
L 4 HOH A 9 270 31 HOH HOH . 
L 4 HOH A 10 271 32 HOH HOH . 
L 4 HOH A 11 272 35 HOH HOH . 
L 4 HOH A 12 273 41 HOH HOH . 
L 4 HOH A 13 274 55 HOH HOH . 
L 4 HOH A 14 275 68 HOH HOH . 
L 4 HOH A 15 276 71 HOH HOH . 
L 4 HOH A 16 277 73 HOH HOH . 
L 4 HOH A 17 278 74 HOH HOH . 
L 4 HOH A 18 279 77 HOH HOH . 
L 4 HOH A 19 280 78 HOH HOH . 
L 4 HOH A 20 281 80 HOH HOH . 
L 4 HOH A 21 282 88 HOH HOH . 
L 4 HOH A 22 283 91 HOH HOH . 
M 4 HOH B 1 262 2 HOH HOH . 
M 4 HOH B 2 263 3 HOH HOH . 
M 4 HOH B 3 264 4 HOH HOH . 
M 4 HOH B 4 265 6 HOH HOH . 
M 4 HOH B 5 266 8 HOH HOH . 
M 4 HOH B 6 267 9 HOH HOH . 
M 4 HOH B 7 268 15 HOH HOH . 
M 4 HOH B 8 269 18 HOH HOH . 
M 4 HOH B 9 270 19 HOH HOH . 
M 4 HOH B 10 271 22 HOH HOH . 
M 4 HOH B 11 272 23 HOH HOH . 
M 4 HOH B 12 273 24 HOH HOH . 
M 4 HOH B 13 274 26 HOH HOH . 
M 4 HOH B 14 275 30 HOH HOH . 
M 4 HOH B 15 276 33 HOH HOH . 
M 4 HOH B 16 277 38 HOH HOH . 
M 4 HOH B 17 278 42 HOH HOH . 
M 4 HOH B 18 279 44 HOH HOH . 
M 4 HOH B 19 280 45 HOH HOH . 
M 4 HOH B 20 281 50 HOH HOH . 
M 4 HOH B 21 282 54 HOH HOH . 
M 4 HOH B 22 283 57 HOH HOH . 
M 4 HOH B 23 284 69 HOH HOH . 
M 4 HOH B 24 285 70 HOH HOH . 
M 4 HOH B 25 286 83 HOH HOH . 
M 4 HOH B 26 287 87 HOH HOH . 
M 4 HOH B 27 288 89 HOH HOH . 
M 4 HOH B 28 289 90 HOH HOH . 
M 4 HOH B 29 290 94 HOH HOH . 
M 4 HOH B 30 291 96 HOH HOH . 
M 4 HOH B 31 292 97 HOH HOH . 
M 4 HOH B 32 293 99 HOH HOH . 
N 4 HOH C 1 261 11 HOH HOH . 
N 4 HOH C 2 262 40 HOH HOH . 
N 4 HOH C 3 263 53 HOH HOH . 
N 4 HOH C 4 264 63 HOH HOH . 
N 4 HOH C 5 265 72 HOH HOH . 
N 4 HOH C 6 266 75 HOH HOH . 
N 4 HOH C 7 267 82 HOH HOH . 
O 4 HOH D 1 262 39 HOH HOH . 
O 4 HOH D 2 263 52 HOH HOH . 
O 4 HOH D 3 264 62 HOH HOH . 
O 4 HOH D 4 265 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C3' AC2 . . . J 2 -12.157 15.745 -42.97 1 56.6 ? C3' AC2 601 D 1 
HETATM 2 O O3' AC2 . . . J 2 -12.199 15.188 -41.651 1 56.71 ? O3' AC2 601 D 1 
HETATM 3 C C2' AC2 . . . J 2 -12.452 17.234 -42.872 1 55.96 ? C2' AC2 601 D 1 
HETATM 4 O O1' AC2 . . . J 2 -11.386 17.857 -42.164 1 56.06 ? O1' AC2 601 D 1 
HETATM 5 C C1' AC2 . . . J 2 -11.733 18.163 -40.816 1 55.19 ? C1' AC2 601 D 1 
HETATM 6 N N9 AC2 . . . J 2 -12.156 19.553 -40.743 1 54.85 ? N9 AC2 601 D 1 
HETATM 7 C C8 AC2 . . . J 2 -13.423 19.973 -40.635 1 54.86 ? C8 AC2 601 D 1 
HETATM 8 N N7 AC2 . . . J 2 -13.427 21.324 -40.597 1 54.54 ? N7 AC2 601 D 1 
HETATM 9 C C5 AC2 . . . J 2 -12.151 21.744 -40.681 1 54.42 ? C5 AC2 601 D 1 
HETATM 10 C C6 AC2 . . . J 2 -11.563 23.002 -40.692 1 54.37 ? C6 AC2 601 D 1 
HETATM 11 O O6 AC2 . . . J 2 -12.34 24.111 -40.597 1 53.25 ? O6 AC2 601 D 1 
HETATM 12 N N1 AC2 . . . J 2 -10.218 23.113 -40.8 1 54.67 ? N1 AC2 601 D 1 
HETATM 13 C C2 AC2 . . . J 2 -9.449 22.004 -40.894 1 54.08 ? C2 AC2 601 D 1 
HETATM 14 N N2 AC2 . . . J 2 -8.111 22.143 -40.995 1 54.18 ? N2 AC2 601 D 1 
HETATM 15 N N3 AC2 . . . J 2 -9.999 20.767 -40.884 1 54.39 ? N3 AC2 601 D 1 
HETATM 16 C C4 AC2 . . . J 2 -11.348 20.619 -40.78 1 54.93 ? C4 AC2 601 D 1 
#
_model_server_stats.io_time_ms              7 
_model_server_stats.parse_time_ms           30 
_model_server_stats.create_model_time_ms    9 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           16 
#