data_3MKS
#
_model_server_result.job_id            EZmDG3EDWZl6Fwk0UjyBlg 
_model_server_result.datetime_utc      '2024-11-24 00:57:07' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3mks 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":1}' 
#
_entry.id    3MKS 
#
_exptl.entry_id    3MKS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              342.344 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "1,1'-binaphthalene-2,2'-dicarboxylic acid" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3MKS 
_cell.length_a            108.281 
_cell.length_b            108.281 
_cell.length_c            165.594 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3MKS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 1 1 
A,B,E,F,G,H,I,R,S 2 1 
C,D,J,K,L,M,N,O,P,Q,T,U 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C22 H14 O4' 
_chem_comp.formula_weight    342.344 
_chem_comp.id                C1C 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "1,1'-binaphthalene-2,2'-dicarboxylic acid" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     '1-(2-carboxynaphth-1yl)-2-naphthoic acid' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C2 C1 C1C doub 70 n y 
C6 C1 C1C sing 71 n y 
C1 H1 C1C sing 72 n n 
C3 C2 C1C sing 73 n y 
C2 H2 C1C sing 74 n n 
C7 C3 C1C doub 75 n y 
C4 C3 C1C sing 76 n y 
C10 C4 C1C doub 77 n y 
C4 C5 C1C sing 78 n y 
C5 C6 C1C doub 79 n y 
C5 H5 C1C sing 80 n n 
C6 H6 C1C sing 81 n n 
C8 C7 C1C sing 82 n y 
C7 H7 C1C sing 83 n n 
C9 C8 C1C doub 84 n y 
C8 H8 C1C sing 85 n n 
C24 C9 C1C sing 86 n n 
C9 C10 C1C sing 87 n y 
C11 C10 C1C sing 88 n y 
C16 C11 C1C doub 89 n y 
C11 C12 C1C sing 90 n y 
C13 C12 C1C sing 91 n y 
C12 C17 C1C doub 92 n y 
C14 C13 C1C sing 93 n y 
C13 C20 C1C doub 94 n y 
C15 C14 C1C doub 95 n y 
C14 H14 C1C sing 96 n n 
C15 C16 C1C sing 97 n y 
C15 H15 C1C sing 98 n n 
C21 C16 C1C sing 99 n n 
C17 C18 C1C sing 100 n y 
C17 H17 C1C sing 101 n n 
C19 C18 C1C doub 102 n y 
C18 H18 C1C sing 103 n n 
C20 C19 C1C sing 104 n y 
C19 H19 C1C sing 105 n n 
C20 H20 C1C sing 106 n n 
O23 C21 C1C doub 107 n n 
C21 O22 C1C sing 108 n n 
O22 HO22 C1C sing 109 n n 
O25 C24 C1C doub 110 n n 
O26 C24 C1C sing 111 n n 
O26 HO26 C1C sing 112 n n 
#
_atom_sites.entry_id                     3MKS 
_atom_sites.fract_transf_matrix[1][1]    0.009235 
_atom_sites.fract_transf_matrix[1][2]    0.005332 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010664 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006039 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 B 1 1 1 SO4 SO4 . 
F 3 SO4 B 1 3 3 SO4 SO4 . 
G 3 SO4 B 1 4 4 SO4 SO4 . 
H 3 SO4 B 1 6 6 SO4 SO4 . 
I 3 SO4 B 1 7 7 SO4 SO4 . 
J 4 C1C D 1 1 1 C1C C1C . 
K 3 SO4 D 1 2 2 SO4 SO4 . 
L 3 SO4 D 1 5 5 SO4 SO4 . 
M 3 SO4 D 1 8 8 SO4 SO4 . 
N 3 SO4 D 1 9 9 SO4 SO4 . 
O 3 SO4 D 1 10 10 SO4 SO4 . 
P 3 SO4 D 1 11 11 SO4 SO4 . 
Q 5 GOL D 1 745 745 GOL GOL . 
R 6 HOH A 1 195 195 HOH HOH . 
R 6 HOH A 2 196 196 HOH HOH . 
R 6 HOH A 3 197 197 HOH HOH . 
R 6 HOH A 4 198 198 HOH HOH . 
S 6 HOH B 1 2 2 HOH HOH . 
S 6 HOH B 2 5 5 HOH HOH . 
S 6 HOH B 3 8 8 HOH HOH . 
S 6 HOH B 4 9 9 HOH HOH . 
S 6 HOH B 5 12 12 HOH HOH . 
S 6 HOH B 6 13 13 HOH HOH . 
S 6 HOH B 7 15 15 HOH HOH . 
S 6 HOH B 8 19 19 HOH HOH . 
S 6 HOH B 9 20 20 HOH HOH . 
S 6 HOH B 10 22 22 HOH HOH . 
S 6 HOH B 11 26 26 HOH HOH . 
S 6 HOH B 12 29 29 HOH HOH . 
S 6 HOH B 13 30 30 HOH HOH . 
S 6 HOH B 14 32 32 HOH HOH . 
S 6 HOH B 15 33 33 HOH HOH . 
S 6 HOH B 16 37 37 HOH HOH . 
S 6 HOH B 17 39 39 HOH HOH . 
S 6 HOH B 18 40 40 HOH HOH . 
S 6 HOH B 19 745 745 HOH HOH . 
S 6 HOH B 20 746 746 HOH HOH . 
S 6 HOH B 21 747 747 HOH HOH . 
S 6 HOH B 22 748 748 HOH HOH . 
T 6 HOH C 1 195 195 HOH HOH . 
T 6 HOH C 2 196 196 HOH HOH . 
T 6 HOH C 3 197 197 HOH HOH . 
T 6 HOH C 4 198 198 HOH HOH . 
U 6 HOH D 1 16 16 HOH HOH . 
U 6 HOH D 2 21 21 HOH HOH . 
U 6 HOH D 3 24 24 HOH HOH . 
U 6 HOH D 4 25 25 HOH HOH . 
U 6 HOH D 5 27 27 HOH HOH . 
U 6 HOH D 6 31 31 HOH HOH . 
U 6 HOH D 7 34 34 HOH HOH . 
U 6 HOH D 8 35 35 HOH HOH . 
U 6 HOH D 9 36 36 HOH HOH . 
U 6 HOH D 10 38 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 C1C . . . J 4 171.398 34.316 -52.178 1 46 ? C1 C1C 1 D 1 
HETATM 2 C C2 C1C . . . J 4 170.794 35.143 -53.108 1 45.03 ? C2 C1C 1 D 1 
HETATM 3 C C3 C1C . . . J 4 171.4 35.326 -54.35 1 48.65 ? C3 C1C 1 D 1 
HETATM 4 C C4 C1C . . . J 4 172.62 34.645 -54.667 1 48.23 ? C4 C1C 1 D 1 
HETATM 5 C C5 C1C . . . J 4 173.205 33.799 -53.711 1 46.07 ? C5 C1C 1 D 1 
HETATM 6 C C6 C1C . . . J 4 172.598 33.651 -52.474 1 46.04 ? C6 C1C 1 D 1 
HETATM 7 C C7 C1C . . . J 4 170.77 36.164 -55.278 1 47.68 ? C7 C1C 1 D 1 
HETATM 8 C C8 C1C . . . J 4 171.389 36.312 -56.524 1 50.55 ? C8 C1C 1 D 1 
HETATM 9 C C9 C1C . . . J 4 172.593 35.646 -56.829 1 50.17 ? C9 C1C 1 D 1 
HETATM 10 C C10 C1C . . . J 4 173.227 34.788 -55.925 1 45.56 ? C10 C1C 1 D 1 
HETATM 11 C C11 C1C . . . J 4 174.43 34.099 -56.169 1 42.38 ? C11 C1C 1 D 1 
HETATM 12 C C12 C1C . . . J 4 175.658 34.77 -56.051 1 40.43 ? C12 C1C 1 D 1 
HETATM 13 C C13 C1C . . . J 4 176.853 34.101 -56.226 1 37.2 ? C13 C1C 1 D 1 
HETATM 14 C C14 C1C . . . J 4 176.865 32.747 -56.515 1 39.47 ? C14 C1C 1 D 1 
HETATM 15 C C15 C1C . . . J 4 175.667 32.056 -56.63 1 41.16 ? C15 C1C 1 D 1 
HETATM 16 C C16 C1C . . . J 4 174.465 32.726 -56.459 1 41.52 ? C16 C1C 1 D 1 
HETATM 17 C C17 C1C . . . J 4 175.702 36.129 -55.735 1 41.38 ? C17 C1C 1 D 1 
HETATM 18 C C18 C1C . . . J 4 176.908 36.801 -55.636 1 40.56 ? C18 C1C 1 D 1 
HETATM 19 C C19 C1C . . . J 4 178.12 36.122 -55.833 1 38.75 ? C19 C1C 1 D 1 
HETATM 20 C C20 C1C . . . J 4 178.072 34.769 -56.114 1 37.71 ? C20 C1C 1 D 1 
HETATM 21 C C21 C1C . . . J 4 173.231 31.871 -56.578 1 42.38 ? C21 C1C 1 D 1 
HETATM 22 O O22 C1C . . . J 4 173.251 30.774 -55.917 1 40.66 ? O22 C1C 1 D 1 
HETATM 23 O O23 C1C . . . J 4 172.277 32.333 -57.252 1 40.22 ? O23 C1C 1 D 1 
HETATM 24 C C24 C1C . . . J 4 173.169 35.864 -58.193 1 50.36 ? C24 C1C 1 D 1 
HETATM 25 O O25 C1C . . . J 4 173.306 34.85 -58.883 1 57.32 ? O25 C1C 1 D 1 
HETATM 26 O O26 C1C . . . J 4 173.425 37.007 -58.559 1 51.28 ? O26 C1C 1 D 1 
#
_model_server_stats.io_time_ms              23 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           242 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           26 
#