data_3MKS
#
_model_server_result.job_id            7EvwdITycv62YNZZ-aodog 
_model_server_result.datetime_utc      '2024-11-24 00:38:27' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3mks 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":745}' 
#
_entry.id    3MKS 
#
_exptl.entry_id    3MKS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3MKS 
_cell.length_a            108.281 
_cell.length_b            108.281 
_cell.length_c            165.594 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 3MKS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        145 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
PISA dimeric 2 software_defined_assembly 3 
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loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 1 1 
A,B,E,F,G,H,I,R,S 2 1 
C,D,J,K,L,M,N,O,P,Q,T,U 3 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      5 
_struct_asym.id                             Q 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 172 n n 
C1 C2 GOL sing 173 n n 
C1 H11 GOL sing 174 n n 
C1 H12 GOL sing 175 n n 
O1 HO1 GOL sing 176 n n 
C2 O2 GOL sing 177 n n 
C2 C3 GOL sing 178 n n 
C2 H2 GOL sing 179 n n 
O2 HO2 GOL sing 180 n n 
C3 O3 GOL sing 181 n n 
C3 H31 GOL sing 182 n n 
C3 H32 GOL sing 183 n n 
O3 HO3 GOL sing 184 n n 
#
_atom_sites.entry_id                     3MKS 
_atom_sites.fract_transf_matrix[1][1]    0.009235 
_atom_sites.fract_transf_matrix[1][2]    0.005332 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010664 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006039 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 SO4 B 1 1 1 SO4 SO4 . 
F 3 SO4 B 1 3 3 SO4 SO4 . 
G 3 SO4 B 1 4 4 SO4 SO4 . 
H 3 SO4 B 1 6 6 SO4 SO4 . 
I 3 SO4 B 1 7 7 SO4 SO4 . 
J 4 C1C D 1 1 1 C1C C1C . 
K 3 SO4 D 1 2 2 SO4 SO4 . 
L 3 SO4 D 1 5 5 SO4 SO4 . 
M 3 SO4 D 1 8 8 SO4 SO4 . 
N 3 SO4 D 1 9 9 SO4 SO4 . 
O 3 SO4 D 1 10 10 SO4 SO4 . 
P 3 SO4 D 1 11 11 SO4 SO4 . 
Q 5 GOL D 1 745 745 GOL GOL . 
R 6 HOH A 1 195 195 HOH HOH . 
R 6 HOH A 2 196 196 HOH HOH . 
R 6 HOH A 3 197 197 HOH HOH . 
R 6 HOH A 4 198 198 HOH HOH . 
S 6 HOH B 1 2 2 HOH HOH . 
S 6 HOH B 2 5 5 HOH HOH . 
S 6 HOH B 3 8 8 HOH HOH . 
S 6 HOH B 4 9 9 HOH HOH . 
S 6 HOH B 5 12 12 HOH HOH . 
S 6 HOH B 6 13 13 HOH HOH . 
S 6 HOH B 7 15 15 HOH HOH . 
S 6 HOH B 8 19 19 HOH HOH . 
S 6 HOH B 9 20 20 HOH HOH . 
S 6 HOH B 10 22 22 HOH HOH . 
S 6 HOH B 11 26 26 HOH HOH . 
S 6 HOH B 12 29 29 HOH HOH . 
S 6 HOH B 13 30 30 HOH HOH . 
S 6 HOH B 14 32 32 HOH HOH . 
S 6 HOH B 15 33 33 HOH HOH . 
S 6 HOH B 16 37 37 HOH HOH . 
S 6 HOH B 17 39 39 HOH HOH . 
S 6 HOH B 18 40 40 HOH HOH . 
S 6 HOH B 19 745 745 HOH HOH . 
S 6 HOH B 20 746 746 HOH HOH . 
S 6 HOH B 21 747 747 HOH HOH . 
S 6 HOH B 22 748 748 HOH HOH . 
T 6 HOH C 1 195 195 HOH HOH . 
T 6 HOH C 2 196 196 HOH HOH . 
T 6 HOH C 3 197 197 HOH HOH . 
T 6 HOH C 4 198 198 HOH HOH . 
U 6 HOH D 1 16 16 HOH HOH . 
U 6 HOH D 2 21 21 HOH HOH . 
U 6 HOH D 3 24 24 HOH HOH . 
U 6 HOH D 4 25 25 HOH HOH . 
U 6 HOH D 5 27 27 HOH HOH . 
U 6 HOH D 6 31 31 HOH HOH . 
U 6 HOH D 7 34 34 HOH HOH . 
U 6 HOH D 8 35 35 HOH HOH . 
U 6 HOH D 9 36 36 HOH HOH . 
U 6 HOH D 10 38 38 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . Q 5 187.315 27.801 -36.086 1 47.72 ? C1 GOL 745 D 1 
HETATM 2 O O1 GOL . . . Q 5 187.968 27.476 -37.298 1 51.21 ? O1 GOL 745 D 1 
HETATM 3 C C2 GOL . . . Q 5 186.186 28.756 -36.383 1 43.21 ? C2 GOL 745 D 1 
HETATM 4 O O2 GOL . . . Q 5 186.678 29.974 -36.927 1 44.71 ? O2 GOL 745 D 1 
HETATM 5 C C3 GOL . . . Q 5 185.622 29.072 -35.034 1 44.93 ? C3 GOL 745 D 1 
HETATM 6 O O3 GOL . . . Q 5 184.447 28.301 -34.929 1 46.66 ? O3 GOL 745 D 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    25 
_model_server_stats.query_time_ms           439 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           6 
#