data_3MLW # _model_server_result.job_id UwLLphYebTaa9WSIqCPFyg _model_server_result.datetime_utc '2024-11-28 18:08:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mlw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":217}' # _entry.id 3MLW # _exptl.entry_id 3MLW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.35 _cell.angle_gamma 90 _cell.entry_id 3MLW _cell.length_a 98.924 _cell.length_b 82.312 _cell.length_c 149.83 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MLW _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,M,N,O 1 1 D,E,F,J,K,L,P,Q,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 22 L CYS 23 1_555 A SG CYS 89 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 140 L CYS 134 1_555 A SG CYS 199 L CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 22 H CYS 22 1_555 B SG CYS 96 H CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf4 B SG CYS 153 H CYS 140 1_555 B SG CYS 209 H CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? disulf ? disulf5 D SG CYS 22 M CYS 23 1_555 D SG CYS 89 M CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? disulf ? disulf6 D SG CYS 140 M CYS 134 1_555 D SG CYS 199 M CYS 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf7 E SG CYS 22 I CYS 22 1_555 E SG CYS 96 I CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? disulf ? disulf8 E SG CYS 153 I CYS 140 1_555 E SG CYS 209 I CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3MLW _atom_sites.fract_transf_matrix[1][1] 0.010109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.00375 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012149 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007119 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 4 PO4 L 1 210 6 PO4 PO4 . H 4 PO4 H 1 216 1 PO4 PO4 . I 4 PO4 H 1 217 2 PO4 PO4 . J 4 PO4 M 1 210 4 PO4 PO4 . K 4 PO4 I 1 216 3 PO4 PO4 . L 4 PO4 I 1 217 5 PO4 PO4 . M 5 HOH L 1 211 1 HOH HOH . M 5 HOH L 2 212 6 HOH HOH . M 5 HOH L 3 213 7 HOH HOH . M 5 HOH L 4 214 12 HOH HOH . M 5 HOH L 5 215 16 HOH HOH . M 5 HOH L 6 216 26 HOH HOH . M 5 HOH L 7 217 43 HOH HOH . M 5 HOH L 8 218 45 HOH HOH . M 5 HOH L 9 219 49 HOH HOH . M 5 HOH L 10 220 53 HOH HOH . M 5 HOH L 11 221 59 HOH HOH . M 5 HOH L 12 222 66 HOH HOH . M 5 HOH L 13 223 76 HOH HOH . M 5 HOH L 14 224 84 HOH HOH . M 5 HOH L 15 225 86 HOH HOH . M 5 HOH L 16 226 95 HOH HOH . M 5 HOH L 17 227 96 HOH HOH . M 5 HOH L 18 228 98 HOH HOH . M 5 HOH L 19 229 118 HOH HOH . M 5 HOH L 20 230 131 HOH HOH . M 5 HOH L 21 231 134 HOH HOH . M 5 HOH L 22 232 136 HOH HOH . M 5 HOH L 23 233 143 HOH HOH . M 5 HOH L 24 234 150 HOH HOH . M 5 HOH L 25 235 154 HOH HOH . M 5 HOH L 26 236 165 HOH HOH . M 5 HOH L 27 237 174 HOH HOH . M 5 HOH L 28 238 176 HOH HOH . M 5 HOH L 29 239 181 HOH HOH . M 5 HOH L 30 240 186 HOH HOH . M 5 HOH L 31 241 197 HOH HOH . M 5 HOH L 32 242 204 HOH HOH . M 5 HOH L 33 243 205 HOH HOH . M 5 HOH L 34 244 206 HOH HOH . M 5 HOH L 35 246 209 HOH HOH . M 5 HOH L 36 247 210 HOH HOH . N 5 HOH H 1 218 3 HOH HOH . N 5 HOH H 2 219 9 HOH HOH . N 5 HOH H 3 220 10 HOH HOH . N 5 HOH H 4 221 11 HOH HOH . N 5 HOH H 5 222 22 HOH HOH . N 5 HOH H 6 223 24 HOH HOH . N 5 HOH H 7 224 27 HOH HOH . N 5 HOH H 8 225 31 HOH HOH . N 5 HOH H 9 226 34 HOH HOH . N 5 HOH H 10 227 36 HOH HOH . N 5 HOH H 11 228 41 HOH HOH . N 5 HOH H 12 229 42 HOH HOH . N 5 HOH H 13 230 47 HOH HOH . N 5 HOH H 14 231 51 HOH HOH . N 5 HOH H 15 232 54 HOH HOH . N 5 HOH H 16 233 55 HOH HOH . N 5 HOH H 17 234 56 HOH HOH . N 5 HOH H 18 235 68 HOH HOH . N 5 HOH H 19 236 70 HOH HOH . N 5 HOH H 20 237 73 HOH HOH . N 5 HOH H 21 238 75 HOH HOH . N 5 HOH H 22 239 77 HOH HOH . N 5 HOH H 23 240 91 HOH HOH . N 5 HOH H 24 241 93 HOH HOH . N 5 HOH H 25 242 97 HOH HOH . N 5 HOH H 26 243 101 HOH HOH . N 5 HOH H 27 244 104 HOH HOH . N 5 HOH H 28 245 107 HOH HOH . N 5 HOH H 29 246 109 HOH HOH . N 5 HOH H 30 247 110 HOH HOH . N 5 HOH H 31 248 113 HOH HOH . N 5 HOH H 32 249 115 HOH HOH . N 5 HOH H 33 250 120 HOH HOH . N 5 HOH H 34 251 125 HOH HOH . N 5 HOH H 35 252 132 HOH HOH . N 5 HOH H 36 253 135 HOH HOH . N 5 HOH H 37 254 141 HOH HOH . N 5 HOH H 38 255 144 HOH HOH . N 5 HOH H 39 256 148 HOH HOH . N 5 HOH H 40 257 153 HOH HOH . N 5 HOH H 41 258 156 HOH HOH . N 5 HOH H 42 259 166 HOH HOH . N 5 HOH H 43 260 167 HOH HOH . N 5 HOH H 44 261 171 HOH HOH . N 5 HOH H 45 262 182 HOH HOH . N 5 HOH H 46 263 183 HOH HOH . N 5 HOH H 47 264 184 HOH HOH . N 5 HOH H 48 265 198 HOH HOH . N 5 HOH H 49 266 203 HOH HOH . N 5 HOH H 50 267 208 HOH HOH . N 5 HOH H 51 268 211 HOH HOH . N 5 HOH H 52 269 213 HOH HOH . N 5 HOH H 53 270 212 HOH HOH . O 5 HOH P 1 5 5 HOH HOH . O 5 HOH P 2 121 121 HOH HOH . P 5 HOH M 1 211 25 HOH HOH . P 5 HOH M 2 212 46 HOH HOH . P 5 HOH M 3 213 50 HOH HOH . P 5 HOH M 4 214 64 HOH HOH . P 5 HOH M 5 215 67 HOH HOH . P 5 HOH M 6 216 74 HOH HOH . P 5 HOH M 7 217 78 HOH HOH . P 5 HOH M 8 218 79 HOH HOH . P 5 HOH M 9 219 82 HOH HOH . P 5 HOH M 10 220 88 HOH HOH . P 5 HOH M 11 221 99 HOH HOH . P 5 HOH M 12 222 122 HOH HOH . P 5 HOH M 13 223 126 HOH HOH . P 5 HOH M 14 224 128 HOH HOH . P 5 HOH M 15 225 129 HOH HOH . P 5 HOH M 16 226 130 HOH HOH . P 5 HOH M 17 227 139 HOH HOH . P 5 HOH M 18 228 159 HOH HOH . P 5 HOH M 19 229 168 HOH HOH . P 5 HOH M 20 230 170 HOH HOH . P 5 HOH M 21 231 173 HOH HOH . P 5 HOH M 22 232 179 HOH HOH . P 5 HOH M 23 233 188 HOH HOH . P 5 HOH M 24 234 194 HOH HOH . Q 5 HOH I 1 218 8 HOH HOH . Q 5 HOH I 2 219 18 HOH HOH . Q 5 HOH I 3 220 28 HOH HOH . Q 5 HOH I 4 221 29 HOH HOH . Q 5 HOH I 5 222 30 HOH HOH . Q 5 HOH I 6 223 33 HOH HOH . Q 5 HOH I 7 224 37 HOH HOH . Q 5 HOH I 8 225 38 HOH HOH . Q 5 HOH I 9 226 40 HOH HOH . Q 5 HOH I 10 227 48 HOH HOH . Q 5 HOH I 11 228 52 HOH HOH . Q 5 HOH I 12 229 60 HOH HOH . Q 5 HOH I 13 230 61 HOH HOH . Q 5 HOH I 14 231 62 HOH HOH . Q 5 HOH I 15 232 71 HOH HOH . Q 5 HOH I 16 233 80 HOH HOH . Q 5 HOH I 17 234 90 HOH HOH . Q 5 HOH I 18 235 92 HOH HOH . Q 5 HOH I 19 236 94 HOH HOH . Q 5 HOH I 20 237 106 HOH HOH . Q 5 HOH I 21 238 114 HOH HOH . Q 5 HOH I 22 239 124 HOH HOH . Q 5 HOH I 23 240 133 HOH HOH . Q 5 HOH I 24 241 145 HOH HOH . Q 5 HOH I 25 242 147 HOH HOH . Q 5 HOH I 26 243 158 HOH HOH . Q 5 HOH I 27 244 161 HOH HOH . Q 5 HOH I 28 245 207 HOH HOH . Q 5 HOH I 29 246 164 HOH HOH . Q 5 HOH I 30 247 169 HOH HOH . Q 5 HOH I 31 248 175 HOH HOH . Q 5 HOH I 32 249 177 HOH HOH . Q 5 HOH I 33 250 180 HOH HOH . Q 5 HOH I 34 251 185 HOH HOH . Q 5 HOH I 35 252 187 HOH HOH . Q 5 HOH I 36 253 192 HOH HOH . Q 5 HOH I 37 254 196 HOH HOH . Q 5 HOH I 38 255 200 HOH HOH . Q 5 HOH I 39 256 201 HOH HOH . Q 5 HOH I 40 257 202 HOH HOH . Q 5 HOH I 41 258 163 HOH HOH . R 5 HOH Q 1 17 17 HOH HOH . R 5 HOH Q 2 19 19 HOH HOH . R 5 HOH Q 3 32 32 HOH HOH . R 5 HOH Q 4 39 39 HOH HOH . R 5 HOH Q 5 199 199 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . L 4 9.757 30.758 14.989 1 80.39 ? P PO4 217 I 1 HETATM 2 O O1 PO4 . . . L 4 11.239 30.715 14.685 1 80.08 ? O1 PO4 217 I 1 HETATM 3 O O2 PO4 . . . L 4 8.957 30.51 13.728 1 79.7 ? O2 PO4 217 I 1 HETATM 4 O O3 PO4 . . . L 4 9.427 29.669 15.982 1 80.03 ? O3 PO4 217 I 1 HETATM 5 O O4 PO4 . . . L 4 9.41 32.117 15.569 1 80.09 ? O4 PO4 217 I 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 26 _model_server_stats.query_time_ms 294 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #