data_3MN9
#
_model_server_result.job_id            9kKRjUrCgCdRqeRVGxGwOg 
_model_server_result.datetime_utc      '2024-10-13 00:23:21' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3mn9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":901}' 
#
_entry.id    3MN9 
#
_exptl.entry_id    3MN9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              40.078 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CALCIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3MN9 
_cell.length_a            126.08 
_cell.length_b            126.08 
_cell.length_c            56.37 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3MN9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        170 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 E O HOH . A HOH 396 1_555 D CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.812 ? 
metalc ? metalc2 E O HOH . A HOH 409 1_555 D CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.27 ? 
metalc ? metalc3 E O HOH . A HOH 479 1_555 D CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? 
metalc ? metalc4 E O HOH . A HOH 496 1_555 D CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.259 ? 
metalc ? metalc5 C O1B ATP . A ATP 800 1_555 D CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? 
metalc ? metalc6 C O2G ATP . A ATP 800 1_555 D CA CA . A CA 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? 
#
_chem_comp.formula           'Ca 2' 
_chem_comp.formula_weight    40.078 
_chem_comp.id                CA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CALCIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3MN9 
_atom_sites.fract_transf_matrix[1][1]    0.007931 
_atom_sites.fract_transf_matrix[1][2]    0.004579 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009158 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01774 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ATP A 1 800 800 ATP ATP . 
D 4 CA A 1 901 901 CA CA . 
E 5 HOH A 1 1 1 HOH HOH . 
E 5 HOH A 2 376 2 HOH HOH . 
E 5 HOH A 3 377 3 HOH HOH . 
E 5 HOH A 4 378 4 HOH HOH . 
E 5 HOH A 5 379 5 HOH HOH . 
E 5 HOH A 6 380 6 HOH HOH . 
E 5 HOH A 7 381 8 HOH HOH . 
E 5 HOH A 8 382 9 HOH HOH . 
E 5 HOH A 9 383 10 HOH HOH . 
E 5 HOH A 10 384 11 HOH HOH . 
E 5 HOH A 11 385 12 HOH HOH . 
E 5 HOH A 12 386 13 HOH HOH . 
E 5 HOH A 13 387 14 HOH HOH . 
E 5 HOH A 14 388 15 HOH HOH . 
E 5 HOH A 15 389 16 HOH HOH . 
E 5 HOH A 16 390 17 HOH HOH . 
E 5 HOH A 17 391 18 HOH HOH . 
E 5 HOH A 18 392 19 HOH HOH . 
E 5 HOH A 19 393 20 HOH HOH . 
E 5 HOH A 20 394 21 HOH HOH . 
E 5 HOH A 21 395 22 HOH HOH . 
E 5 HOH A 22 396 23 HOH HOH . 
E 5 HOH A 23 397 24 HOH HOH . 
E 5 HOH A 24 398 25 HOH HOH . 
E 5 HOH A 25 399 26 HOH HOH . 
E 5 HOH A 26 400 27 HOH HOH . 
E 5 HOH A 27 401 28 HOH HOH . 
E 5 HOH A 28 402 29 HOH HOH . 
E 5 HOH A 29 403 30 HOH HOH . 
E 5 HOH A 30 404 31 HOH HOH . 
E 5 HOH A 31 405 32 HOH HOH . 
E 5 HOH A 32 406 33 HOH HOH . 
E 5 HOH A 33 407 34 HOH HOH . 
E 5 HOH A 34 408 35 HOH HOH . 
E 5 HOH A 35 409 36 HOH HOH . 
E 5 HOH A 36 410 37 HOH HOH . 
E 5 HOH A 37 411 38 HOH HOH . 
E 5 HOH A 38 412 39 HOH HOH . 
E 5 HOH A 39 413 40 HOH HOH . 
E 5 HOH A 40 414 41 HOH HOH . 
E 5 HOH A 41 415 42 HOH HOH . 
E 5 HOH A 42 416 43 HOH HOH . 
E 5 HOH A 43 417 44 HOH HOH . 
E 5 HOH A 44 418 45 HOH HOH . 
E 5 HOH A 45 419 46 HOH HOH . 
E 5 HOH A 46 420 47 HOH HOH . 
E 5 HOH A 47 421 48 HOH HOH . 
E 5 HOH A 48 422 49 HOH HOH . 
E 5 HOH A 49 423 50 HOH HOH . 
E 5 HOH A 50 424 51 HOH HOH . 
E 5 HOH A 51 425 52 HOH HOH . 
E 5 HOH A 52 426 53 HOH HOH . 
E 5 HOH A 53 427 54 HOH HOH . 
E 5 HOH A 54 428 55 HOH HOH . 
E 5 HOH A 55 429 56 HOH HOH . 
E 5 HOH A 56 430 57 HOH HOH . 
E 5 HOH A 57 431 58 HOH HOH . 
E 5 HOH A 58 432 59 HOH HOH . 
E 5 HOH A 59 433 60 HOH HOH . 
E 5 HOH A 60 434 61 HOH HOH . 
E 5 HOH A 61 435 62 HOH HOH . 
E 5 HOH A 62 436 63 HOH HOH . 
E 5 HOH A 63 437 64 HOH HOH . 
E 5 HOH A 64 438 65 HOH HOH . 
E 5 HOH A 65 439 66 HOH HOH . 
E 5 HOH A 66 440 67 HOH HOH . 
E 5 HOH A 67 441 68 HOH HOH . 
E 5 HOH A 68 442 69 HOH HOH . 
E 5 HOH A 69 443 70 HOH HOH . 
E 5 HOH A 70 444 71 HOH HOH . 
E 5 HOH A 71 445 72 HOH HOH . 
E 5 HOH A 72 446 73 HOH HOH . 
E 5 HOH A 73 447 75 HOH HOH . 
E 5 HOH A 74 448 76 HOH HOH . 
E 5 HOH A 75 449 77 HOH HOH . 
E 5 HOH A 76 450 78 HOH HOH . 
E 5 HOH A 77 451 79 HOH HOH . 
E 5 HOH A 78 452 80 HOH HOH . 
E 5 HOH A 79 453 82 HOH HOH . 
E 5 HOH A 80 454 83 HOH HOH . 
E 5 HOH A 81 455 84 HOH HOH . 
E 5 HOH A 82 456 85 HOH HOH . 
E 5 HOH A 83 457 86 HOH HOH . 
E 5 HOH A 84 458 87 HOH HOH . 
E 5 HOH A 85 459 88 HOH HOH . 
E 5 HOH A 86 460 89 HOH HOH . 
E 5 HOH A 87 461 90 HOH HOH . 
E 5 HOH A 88 462 91 HOH HOH . 
E 5 HOH A 89 463 92 HOH HOH . 
E 5 HOH A 90 464 93 HOH HOH . 
E 5 HOH A 91 465 94 HOH HOH . 
E 5 HOH A 92 466 95 HOH HOH . 
E 5 HOH A 93 467 96 HOH HOH . 
E 5 HOH A 94 468 97 HOH HOH . 
E 5 HOH A 95 469 98 HOH HOH . 
E 5 HOH A 96 470 99 HOH HOH . 
E 5 HOH A 97 471 100 HOH HOH . 
E 5 HOH A 98 472 101 HOH HOH . 
E 5 HOH A 99 473 102 HOH HOH . 
E 5 HOH A 100 474 103 HOH HOH . 
E 5 HOH A 101 475 104 HOH HOH . 
E 5 HOH A 102 476 105 HOH HOH . 
E 5 HOH A 103 477 106 HOH HOH . 
E 5 HOH A 104 478 107 HOH HOH . 
E 5 HOH A 105 479 108 HOH HOH . 
E 5 HOH A 106 480 109 HOH HOH . 
E 5 HOH A 107 481 110 HOH HOH . 
E 5 HOH A 108 482 111 HOH HOH . 
E 5 HOH A 109 483 112 HOH HOH . 
E 5 HOH A 110 484 114 HOH HOH . 
E 5 HOH A 111 485 115 HOH HOH . 
E 5 HOH A 112 486 116 HOH HOH . 
E 5 HOH A 113 487 117 HOH HOH . 
E 5 HOH A 114 488 118 HOH HOH . 
E 5 HOH A 115 489 119 HOH HOH . 
E 5 HOH A 116 490 120 HOH HOH . 
E 5 HOH A 117 491 121 HOH HOH . 
E 5 HOH A 118 492 122 HOH HOH . 
E 5 HOH A 119 493 123 HOH HOH . 
E 5 HOH A 120 494 124 HOH HOH . 
E 5 HOH A 121 495 125 HOH HOH . 
E 5 HOH A 122 496 126 HOH HOH . 
E 5 HOH A 123 497 127 HOH HOH . 
E 5 HOH A 124 498 128 HOH HOH . 
E 5 HOH A 125 499 129 HOH HOH . 
E 5 HOH A 126 500 130 HOH HOH . 
E 5 HOH A 127 501 131 HOH HOH . 
E 5 HOH A 128 502 135 HOH HOH . 
E 5 HOH A 129 503 136 HOH HOH . 
E 5 HOH A 130 504 137 HOH HOH . 
E 5 HOH A 131 505 138 HOH HOH . 
E 5 HOH A 132 506 139 HOH HOH . 
E 5 HOH A 133 507 141 HOH HOH . 
E 5 HOH A 134 508 142 HOH HOH . 
F 5 HOH X 1 20 7 HOH HOH . 
F 5 HOH X 2 74 74 HOH HOH . 
F 5 HOH X 3 81 81 HOH HOH . 
F 5 HOH X 4 113 113 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CA 
_atom_site.label_atom_id         CA 
_atom_site.label_comp_id         CA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               37.796 
_atom_site.Cartn_y               -32.851 
_atom_site.Cartn_z               -0.764 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        30.22 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CA 
_atom_site.auth_comp_id          CA 
_atom_site.auth_seq_id           901 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           286 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#