data_3MO0 # _model_server_result.job_id u3dhK1OcSlNO8pFTZzQ-FQ _model_server_result.datetime_utc '2024-11-12 19:53:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mo0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":1}' # _entry.id 3MO0 # _exptl.entry_id 3MO0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MO0 _cell.length_a 47.3 _cell.length_b 94.5 _cell.length_c 138.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MO0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,T 1 1 B,K,L,M,N,O,P,Q,R,S,U 2 1 A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 44 A CYS 994 1_555 A SG CYS 53 A CYS 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? disulf ? disulf2 B SG CYS 44 B CYS 994 1_555 B SG CYS 53 B CYS 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc1 F ZN ZN . A ZN 2 1_555 A SG CYS 87 A CYS 1037 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.307 ? metalc ? metalc2 F ZN ZN . A ZN 2 1_555 A SG CYS 124 A CYS 1074 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc3 F ZN ZN . A ZN 2 1_555 A SG CYS 130 A CYS 1080 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.196 ? metalc ? metalc4 F ZN ZN . A ZN 2 1_555 A SG CYS 134 A CYS 1084 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc5 G ZN ZN . A ZN 3 1_555 A SG CYS 81 A CYS 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc6 G ZN ZN . A ZN 3 1_555 A SG CYS 83 A CYS 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc7 G ZN ZN . A ZN 3 1_555 A SG CYS 87 A CYS 1037 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc8 G ZN ZN . A ZN 3 1_555 A SG CYS 92 A CYS 1042 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.411 ? metalc ? metalc9 H ZN ZN . A ZN 4 1_555 A SG CYS 222 A CYS 1172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.654 ? metalc ? metalc10 H ZN ZN . A ZN 4 1_555 A SG CYS 275 A CYS 1225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.638 ? metalc ? metalc11 H ZN ZN . A ZN 4 1_555 A SG CYS 282 A CYS 1232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc12 I ZN ZN . A ZN 10 1_555 A NE2 HIS 126 A HIS 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.169 ? metalc ? metalc13 I ZN ZN . A ZN 10 1_555 A NE2 HIS 235 A HIS 1185 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc14 I ZN ZN . A ZN 10 1_555 B SG CYS 64 B CYS 1014 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.808 ? metalc ? metalc15 A SG CYS 64 A CYS 1014 1_555 S ZN ZN . B ZN 9 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc16 A SG CYS 81 A CYS 1031 1_555 E ZN ZN . A ZN 1236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc17 A SG CYS 94 A CYS 1044 1_555 E ZN ZN . A ZN 1236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.609 ? metalc ? metalc18 A SG CYS 124 A CYS 1074 1_555 E ZN ZN . A ZN 1236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.447 ? metalc ? metalc19 A SG CYS 128 A CYS 1078 1_555 E ZN ZN . A ZN 1236 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc20 O ZN ZN . B ZN 5 1_555 B SG CYS 81 B CYS 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.415 ? metalc ? metalc21 O ZN ZN . B ZN 5 1_555 B SG CYS 94 B CYS 1044 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.464 ? metalc ? metalc22 O ZN ZN . B ZN 5 1_555 B SG CYS 124 B CYS 1074 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.611 ? metalc ? metalc23 O ZN ZN . B ZN 5 1_555 B SG CYS 128 B CYS 1078 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.276 ? metalc ? metalc24 P ZN ZN . B ZN 6 1_555 B SG CYS 87 B CYS 1037 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.605 ? metalc ? metalc25 P ZN ZN . B ZN 6 1_555 B SG CYS 124 B CYS 1074 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc26 P ZN ZN . B ZN 6 1_555 B SG CYS 130 B CYS 1080 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc27 P ZN ZN . B ZN 6 1_555 B SG CYS 134 B CYS 1084 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.423 ? metalc ? metalc28 Q ZN ZN . B ZN 7 1_555 B SG CYS 81 B CYS 1031 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.232 ? metalc ? metalc29 Q ZN ZN . B ZN 7 1_555 B SG CYS 83 B CYS 1033 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc30 Q ZN ZN . B ZN 7 1_555 B SG CYS 87 B CYS 1037 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.382 ? metalc ? metalc31 Q ZN ZN . B ZN 7 1_555 B SG CYS 92 B CYS 1042 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.266 ? metalc ? metalc32 R ZN ZN . B ZN 8 1_555 B SG CYS 222 B CYS 1172 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? metalc ? metalc33 R ZN ZN . B ZN 8 1_555 B SG CYS 275 B CYS 1225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? metalc ? metalc34 R ZN ZN . B ZN 8 1_555 B SG CYS 277 B CYS 1227 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.326 ? metalc ? metalc35 R ZN ZN . B ZN 8 1_555 B SG CYS 282 B CYS 1232 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.752 ? metalc ? metalc36 S ZN ZN . B ZN 9 1_555 B NE2 HIS 77 B HIS 1027 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc37 S ZN ZN . B ZN 9 1_555 B NE2 HIS 126 B HIS 1076 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 159 n n C1 C2 EDO sing 160 n n C1 H11 EDO sing 161 n n C1 H12 EDO sing 162 n n O1 HO1 EDO sing 163 n n C2 O2 EDO sing 164 n n C2 H21 EDO sing 165 n n C2 H22 EDO sing 166 n n O2 HO2 EDO sing 167 n n # _atom_sites.entry_id 3MO0 _atom_sites.fract_transf_matrix[1][1] 0.021142 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010582 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007236 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SAH A 1 101 101 SAH SAH . D 3 E11 A 1 2001 2001 E11 E11 . E 4 ZN A 1 1236 1236 ZN ZN . F 4 ZN A 1 2 2 ZN ZN . G 4 ZN A 1 3 3 ZN ZN . H 4 ZN A 1 4 4 ZN ZN . I 4 ZN A 1 10 10 ZN ZN . J 3 E11 A 1 2002 2002 E11 E11 . K 5 EDO B 1 1 1 EDO EDO . L 5 EDO B 1 2 2 EDO EDO . M 2 SAH B 1 102 102 SAH SAH . N 3 E11 B 1 2003 2003 E11 E11 . O 4 ZN B 1 5 5 ZN ZN . P 4 ZN B 1 6 6 ZN ZN . Q 4 ZN B 1 7 7 ZN ZN . R 4 ZN B 1 8 8 ZN ZN . S 4 ZN B 1 9 9 ZN ZN . T 6 HOH A 1 6 6 HOH HOH . T 6 HOH A 2 7 7 HOH HOH . T 6 HOH A 3 14 14 HOH HOH . T 6 HOH A 4 21 21 HOH HOH . T 6 HOH A 5 22 22 HOH HOH . T 6 HOH A 6 23 23 HOH HOH . T 6 HOH A 7 24 24 HOH HOH . T 6 HOH A 8 25 25 HOH HOH . T 6 HOH A 9 27 27 HOH HOH . T 6 HOH A 10 28 28 HOH HOH . T 6 HOH A 11 29 29 HOH HOH . T 6 HOH A 12 31 31 HOH HOH . T 6 HOH A 13 32 32 HOH HOH . T 6 HOH A 14 33 33 HOH HOH . T 6 HOH A 15 34 34 HOH HOH . T 6 HOH A 16 35 35 HOH HOH . T 6 HOH A 17 37 37 HOH HOH . T 6 HOH A 18 38 38 HOH HOH . T 6 HOH A 19 1238 1238 HOH HOH . T 6 HOH A 20 1239 1239 HOH HOH . T 6 HOH A 21 1240 1240 HOH HOH . T 6 HOH A 22 1241 1241 HOH HOH . U 6 HOH B 1 11 11 HOH HOH . U 6 HOH B 2 12 12 HOH HOH . U 6 HOH B 3 13 13 HOH HOH . U 6 HOH B 4 15 15 HOH HOH . U 6 HOH B 5 16 16 HOH HOH . U 6 HOH B 6 17 17 HOH HOH . U 6 HOH B 7 18 18 HOH HOH . U 6 HOH B 8 19 19 HOH HOH . U 6 HOH B 9 20 20 HOH HOH . U 6 HOH B 10 26 26 HOH HOH . U 6 HOH B 11 30 30 HOH HOH . U 6 HOH B 12 36 36 HOH HOH . U 6 HOH B 13 39 39 HOH HOH . U 6 HOH B 14 40 40 HOH HOH . U 6 HOH B 15 41 41 HOH HOH . U 6 HOH B 16 42 42 HOH HOH . U 6 HOH B 17 43 43 HOH HOH . U 6 HOH B 18 44 44 HOH HOH . U 6 HOH B 19 45 45 HOH HOH . U 6 HOH B 20 1237 1237 HOH HOH . U 6 HOH B 21 1238 1238 HOH HOH . U 6 HOH B 22 1239 1239 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . K 5 22.22 -8.543 33.722 1 60.37 ? C1 EDO 1 B 1 HETATM 2 O O1 EDO . . . K 5 22.371 -9.942 33.993 1 61.34 ? O1 EDO 1 B 1 HETATM 3 C C2 EDO . . . K 5 21.415 -7.867 34.838 1 59.15 ? C2 EDO 1 B 1 HETATM 4 O O2 EDO . . . K 5 22.193 -7.825 36.038 1 55.6 ? O2 EDO 1 B 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #