data_3MOG # _model_server_result.job_id QKdlTFTuyXEPknSRsvPWcQ _model_server_result.datetime_utc '2025-07-02 00:42:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mog # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":485}' # _entry.id 3MOG # _exptl.entry_id 3MOG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MOG _cell.length_a 71.302 _cell.length_b 145.753 _cell.length_c 148.783 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MOG _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3MOG _atom_sites.fract_transf_matrix[1][1] 0.014025 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006861 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006721 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 CL A 1 484 1 CL CL . E 2 CL B 1 484 1 CL CL . F 3 GOL B 1 485 1 GOL GOL . G 2 CL C 1 484 1 CL CL . H 3 GOL C 1 485 1 GOL GOL . I 4 HOH A 1 485 2 HOH HOH . I 4 HOH A 2 486 6 HOH HOH . I 4 HOH A 3 487 9 HOH HOH . I 4 HOH A 4 488 16 HOH HOH . I 4 HOH A 5 489 17 HOH HOH . I 4 HOH A 6 490 18 HOH HOH . I 4 HOH A 7 491 29 HOH HOH . I 4 HOH A 8 492 31 HOH HOH . I 4 HOH A 9 493 33 HOH HOH . I 4 HOH A 10 494 40 HOH HOH . I 4 HOH A 11 495 42 HOH HOH . I 4 HOH A 12 496 49 HOH HOH . I 4 HOH A 13 497 57 HOH HOH . I 4 HOH A 14 498 60 HOH HOH . I 4 HOH A 15 499 62 HOH HOH . I 4 HOH A 16 500 63 HOH HOH . I 4 HOH A 17 501 70 HOH HOH . I 4 HOH A 18 502 72 HOH HOH . I 4 HOH A 19 503 74 HOH HOH . I 4 HOH A 20 504 75 HOH HOH . I 4 HOH A 21 505 77 HOH HOH . I 4 HOH A 22 506 79 HOH HOH . I 4 HOH A 23 507 81 HOH HOH . I 4 HOH A 24 508 82 HOH HOH . I 4 HOH A 25 509 83 HOH HOH . I 4 HOH A 26 510 84 HOH HOH . I 4 HOH A 27 511 86 HOH HOH . I 4 HOH A 28 512 90 HOH HOH . I 4 HOH A 29 513 94 HOH HOH . I 4 HOH A 30 514 106 HOH HOH . I 4 HOH A 31 515 109 HOH HOH . I 4 HOH A 32 516 112 HOH HOH . I 4 HOH A 33 517 113 HOH HOH . I 4 HOH A 34 518 116 HOH HOH . I 4 HOH A 35 519 118 HOH HOH . I 4 HOH A 36 520 119 HOH HOH . I 4 HOH A 37 521 121 HOH HOH . I 4 HOH A 38 522 122 HOH HOH . I 4 HOH A 39 523 125 HOH HOH . I 4 HOH A 40 524 126 HOH HOH . I 4 HOH A 41 525 129 HOH HOH . I 4 HOH A 42 526 130 HOH HOH . I 4 HOH A 43 527 135 HOH HOH . I 4 HOH A 44 528 140 HOH HOH . I 4 HOH A 45 529 146 HOH HOH . I 4 HOH A 46 530 148 HOH HOH . I 4 HOH A 47 531 149 HOH HOH . I 4 HOH A 48 532 163 HOH HOH . I 4 HOH A 49 533 164 HOH HOH . I 4 HOH A 50 534 166 HOH HOH . I 4 HOH A 51 535 168 HOH HOH . I 4 HOH A 52 536 173 HOH HOH . I 4 HOH A 53 537 177 HOH HOH . I 4 HOH A 54 538 180 HOH HOH . I 4 HOH A 55 539 183 HOH HOH . I 4 HOH A 56 540 189 HOH HOH . I 4 HOH A 57 541 193 HOH HOH . I 4 HOH A 58 542 196 HOH HOH . I 4 HOH A 59 543 200 HOH HOH . I 4 HOH A 60 544 203 HOH HOH . I 4 HOH A 61 545 207 HOH HOH . I 4 HOH A 62 546 214 HOH HOH . I 4 HOH A 63 547 217 HOH HOH . I 4 HOH A 64 548 231 HOH HOH . I 4 HOH A 65 549 232 HOH HOH . I 4 HOH A 66 550 236 HOH HOH . I 4 HOH A 67 551 238 HOH HOH . I 4 HOH A 68 552 250 HOH HOH . I 4 HOH A 69 553 253 HOH HOH . I 4 HOH A 70 554 254 HOH HOH . I 4 HOH A 71 555 268 HOH HOH . I 4 HOH A 72 556 271 HOH HOH . I 4 HOH A 73 557 275 HOH HOH . I 4 HOH A 74 558 277 HOH HOH . I 4 HOH A 75 559 285 HOH HOH . I 4 HOH A 76 560 286 HOH HOH . I 4 HOH A 77 561 292 HOH HOH . I 4 HOH A 78 562 298 HOH HOH . I 4 HOH A 79 563 301 HOH HOH . I 4 HOH A 80 564 305 HOH HOH . I 4 HOH A 81 565 307 HOH HOH . I 4 HOH A 82 566 315 HOH HOH . I 4 HOH A 83 567 316 HOH HOH . I 4 HOH A 84 568 317 HOH HOH . I 4 HOH A 85 569 328 HOH HOH . I 4 HOH A 86 570 339 HOH HOH . I 4 HOH A 87 571 343 HOH HOH . I 4 HOH A 88 572 353 HOH HOH . I 4 HOH A 89 573 354 HOH HOH . I 4 HOH A 90 574 360 HOH HOH . I 4 HOH A 91 575 361 HOH HOH . I 4 HOH A 92 576 362 HOH HOH . I 4 HOH A 93 577 363 HOH HOH . I 4 HOH A 94 578 364 HOH HOH . I 4 HOH A 95 579 366 HOH HOH . I 4 HOH A 96 580 367 HOH HOH . I 4 HOH A 97 581 368 HOH HOH . I 4 HOH A 98 582 369 HOH HOH . I 4 HOH A 99 583 370 HOH HOH . I 4 HOH A 100 584 371 HOH HOH . I 4 HOH A 101 585 374 HOH HOH . I 4 HOH A 102 586 375 HOH HOH . I 4 HOH A 103 587 376 HOH HOH . I 4 HOH A 104 588 377 HOH HOH . I 4 HOH A 105 589 391 HOH HOH . I 4 HOH A 106 590 392 HOH HOH . I 4 HOH A 107 591 393 HOH HOH . I 4 HOH A 108 592 394 HOH HOH . I 4 HOH A 109 593 395 HOH HOH . I 4 HOH A 110 594 396 HOH HOH . I 4 HOH A 111 595 397 HOH HOH . I 4 HOH A 112 596 404 HOH HOH . J 4 HOH B 1 486 8 HOH HOH . J 4 HOH B 2 487 11 HOH HOH . J 4 HOH B 3 488 14 HOH HOH . J 4 HOH B 4 489 23 HOH HOH . J 4 HOH B 5 490 27 HOH HOH . J 4 HOH B 6 491 32 HOH HOH . J 4 HOH B 7 492 39 HOH HOH . J 4 HOH B 8 493 43 HOH HOH . J 4 HOH B 9 494 44 HOH HOH . J 4 HOH B 10 495 54 HOH HOH . J 4 HOH B 11 496 56 HOH HOH . J 4 HOH B 12 497 65 HOH HOH . J 4 HOH B 13 498 71 HOH HOH . J 4 HOH B 14 499 85 HOH HOH . J 4 HOH B 15 500 87 HOH HOH . J 4 HOH B 16 501 88 HOH HOH . J 4 HOH B 17 502 89 HOH HOH . J 4 HOH B 18 503 91 HOH HOH . J 4 HOH B 19 504 93 HOH HOH . J 4 HOH B 20 505 103 HOH HOH . J 4 HOH B 21 506 105 HOH HOH . J 4 HOH B 22 507 115 HOH HOH . J 4 HOH B 23 508 124 HOH HOH . J 4 HOH B 24 509 127 HOH HOH . J 4 HOH B 25 510 137 HOH HOH . J 4 HOH B 26 511 142 HOH HOH . J 4 HOH B 27 512 154 HOH HOH . J 4 HOH B 28 513 155 HOH HOH . J 4 HOH B 29 514 157 HOH HOH . J 4 HOH B 30 515 161 HOH HOH . J 4 HOH B 31 516 167 HOH HOH . J 4 HOH B 32 517 174 HOH HOH . J 4 HOH B 33 518 176 HOH HOH . J 4 HOH B 34 519 178 HOH HOH . J 4 HOH B 35 520 182 HOH HOH . J 4 HOH B 36 521 184 HOH HOH . J 4 HOH B 37 522 186 HOH HOH . J 4 HOH B 38 523 190 HOH HOH . J 4 HOH B 39 524 191 HOH HOH . J 4 HOH B 40 525 195 HOH HOH . J 4 HOH B 41 526 202 HOH HOH . J 4 HOH B 42 527 208 HOH HOH . J 4 HOH B 43 528 211 HOH HOH . J 4 HOH B 44 529 215 HOH HOH . J 4 HOH B 45 530 227 HOH HOH . J 4 HOH B 46 531 230 HOH HOH . J 4 HOH B 47 532 245 HOH HOH . J 4 HOH B 48 533 247 HOH HOH . J 4 HOH B 49 534 262 HOH HOH . J 4 HOH B 50 535 263 HOH HOH . J 4 HOH B 51 536 270 HOH HOH . J 4 HOH B 52 537 273 HOH HOH . J 4 HOH B 53 538 281 HOH HOH . J 4 HOH B 54 539 291 HOH HOH . J 4 HOH B 55 540 294 HOH HOH . J 4 HOH B 56 541 295 HOH HOH . J 4 HOH B 57 542 297 HOH HOH . J 4 HOH B 58 543 300 HOH HOH . J 4 HOH B 59 544 303 HOH HOH . J 4 HOH B 60 545 306 HOH HOH . J 4 HOH B 61 546 310 HOH HOH . J 4 HOH B 62 547 312 HOH HOH . J 4 HOH B 63 548 321 HOH HOH . J 4 HOH B 64 549 323 HOH HOH . J 4 HOH B 65 550 330 HOH HOH . J 4 HOH B 66 551 341 HOH HOH . J 4 HOH B 67 552 342 HOH HOH . J 4 HOH B 68 553 344 HOH HOH . J 4 HOH B 69 554 348 HOH HOH . J 4 HOH B 70 555 356 HOH HOH . J 4 HOH B 71 556 378 HOH HOH . J 4 HOH B 72 557 379 HOH HOH . J 4 HOH B 73 558 380 HOH HOH . J 4 HOH B 74 559 381 HOH HOH . J 4 HOH B 75 560 382 HOH HOH . J 4 HOH B 76 561 389 HOH HOH . J 4 HOH B 77 562 390 HOH HOH . K 4 HOH C 1 486 3 HOH HOH . K 4 HOH C 2 487 7 HOH HOH . K 4 HOH C 3 488 10 HOH HOH . K 4 HOH C 4 489 13 HOH HOH . K 4 HOH C 5 490 19 HOH HOH . K 4 HOH C 6 491 20 HOH HOH . K 4 HOH C 7 492 22 HOH HOH . K 4 HOH C 8 493 24 HOH HOH . K 4 HOH C 9 494 25 HOH HOH . K 4 HOH C 10 495 26 HOH HOH . K 4 HOH C 11 496 28 HOH HOH . K 4 HOH C 12 497 30 HOH HOH . K 4 HOH C 13 498 34 HOH HOH . K 4 HOH C 14 499 36 HOH HOH . K 4 HOH C 15 500 37 HOH HOH . K 4 HOH C 16 501 38 HOH HOH . K 4 HOH C 17 502 41 HOH HOH . K 4 HOH C 18 503 45 HOH HOH . K 4 HOH C 19 504 46 HOH HOH . K 4 HOH C 20 505 47 HOH HOH . K 4 HOH C 21 506 48 HOH HOH . K 4 HOH C 22 507 50 HOH HOH . K 4 HOH C 23 508 51 HOH HOH . K 4 HOH C 24 509 53 HOH HOH . K 4 HOH C 25 510 55 HOH HOH . K 4 HOH C 26 511 58 HOH HOH . K 4 HOH C 27 512 59 HOH HOH . K 4 HOH C 28 513 61 HOH HOH . K 4 HOH C 29 514 64 HOH HOH . K 4 HOH C 30 515 66 HOH HOH . K 4 HOH C 31 516 68 HOH HOH . K 4 HOH C 32 517 80 HOH HOH . K 4 HOH C 33 518 95 HOH HOH . K 4 HOH C 34 519 96 HOH HOH . K 4 HOH C 35 520 97 HOH HOH . K 4 HOH C 36 521 98 HOH HOH . K 4 HOH C 37 522 99 HOH HOH . K 4 HOH C 38 523 100 HOH HOH . K 4 HOH C 39 524 101 HOH HOH . K 4 HOH C 40 525 108 HOH HOH . K 4 HOH C 41 526 110 HOH HOH . K 4 HOH C 42 527 114 HOH HOH . K 4 HOH C 43 528 117 HOH HOH . K 4 HOH C 44 529 128 HOH HOH . K 4 HOH C 45 530 131 HOH HOH . K 4 HOH C 46 531 133 HOH HOH . K 4 HOH C 47 532 134 HOH HOH . K 4 HOH C 48 533 138 HOH HOH . K 4 HOH C 49 534 139 HOH HOH . K 4 HOH C 50 535 144 HOH HOH . K 4 HOH C 51 536 145 HOH HOH . K 4 HOH C 52 537 147 HOH HOH . K 4 HOH C 53 538 150 HOH HOH . K 4 HOH C 54 539 151 HOH HOH . K 4 HOH C 55 540 152 HOH HOH . K 4 HOH C 56 541 156 HOH HOH . K 4 HOH C 57 542 165 HOH HOH . K 4 HOH C 58 543 169 HOH HOH . K 4 HOH C 59 544 170 HOH HOH . K 4 HOH C 60 545 171 HOH HOH . K 4 HOH C 61 546 172 HOH HOH . K 4 HOH C 62 547 188 HOH HOH . K 4 HOH C 63 548 192 HOH HOH . K 4 HOH C 64 549 194 HOH HOH . K 4 HOH C 65 550 197 HOH HOH . K 4 HOH C 66 551 198 HOH HOH . K 4 HOH C 67 552 199 HOH HOH . K 4 HOH C 68 553 205 HOH HOH . K 4 HOH C 69 554 210 HOH HOH . K 4 HOH C 70 555 212 HOH HOH . K 4 HOH C 71 556 221 HOH HOH . K 4 HOH C 72 557 223 HOH HOH . K 4 HOH C 73 558 224 HOH HOH . K 4 HOH C 74 559 225 HOH HOH . K 4 HOH C 75 560 228 HOH HOH . K 4 HOH C 76 561 233 HOH HOH . K 4 HOH C 77 562 234 HOH HOH . K 4 HOH C 78 563 235 HOH HOH . K 4 HOH C 79 564 237 HOH HOH . K 4 HOH C 80 565 239 HOH HOH . K 4 HOH C 81 566 246 HOH HOH . K 4 HOH C 82 567 249 HOH HOH . K 4 HOH C 83 568 251 HOH HOH . K 4 HOH C 84 569 252 HOH HOH . K 4 HOH C 85 570 255 HOH HOH . K 4 HOH C 86 571 259 HOH HOH . K 4 HOH C 87 572 261 HOH HOH . K 4 HOH C 88 573 264 HOH HOH . K 4 HOH C 89 574 265 HOH HOH . K 4 HOH C 90 575 266 HOH HOH . K 4 HOH C 91 576 267 HOH HOH . K 4 HOH C 92 577 269 HOH HOH . K 4 HOH C 93 578 274 HOH HOH . K 4 HOH C 94 579 276 HOH HOH . K 4 HOH C 95 580 280 HOH HOH . K 4 HOH C 96 581 287 HOH HOH . K 4 HOH C 97 582 288 HOH HOH . K 4 HOH C 98 583 289 HOH HOH . K 4 HOH C 99 584 290 HOH HOH . K 4 HOH C 100 585 299 HOH HOH . K 4 HOH C 101 586 302 HOH HOH . K 4 HOH C 102 587 308 HOH HOH . K 4 HOH C 103 588 309 HOH HOH . K 4 HOH C 104 589 314 HOH HOH . K 4 HOH C 105 590 318 HOH HOH . K 4 HOH C 106 591 325 HOH HOH . K 4 HOH C 107 592 326 HOH HOH . K 4 HOH C 108 593 329 HOH HOH . K 4 HOH C 109 594 335 HOH HOH . K 4 HOH C 110 595 336 HOH HOH . K 4 HOH C 111 596 337 HOH HOH . K 4 HOH C 112 597 338 HOH HOH . K 4 HOH C 113 598 349 HOH HOH . K 4 HOH C 114 599 359 HOH HOH . K 4 HOH C 115 600 365 HOH HOH . K 4 HOH C 116 601 372 HOH HOH . K 4 HOH C 117 602 373 HOH HOH . K 4 HOH C 118 603 383 HOH HOH . K 4 HOH C 119 604 384 HOH HOH . K 4 HOH C 120 605 385 HOH HOH . K 4 HOH C 121 606 386 HOH HOH . K 4 HOH C 122 607 387 HOH HOH . K 4 HOH C 123 608 388 HOH HOH . K 4 HOH C 124 609 398 HOH HOH . K 4 HOH C 125 610 399 HOH HOH . K 4 HOH C 126 611 400 HOH HOH . K 4 HOH C 127 612 401 HOH HOH . K 4 HOH C 128 613 402 HOH HOH . K 4 HOH C 129 614 403 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 3 -7.264 90.749 98.113 1 74.54 ? C1 GOL 485 C 1 HETATM 2 O O1 GOL . . . H 3 -6.808 91.717 97.194 1 73.27 ? O1 GOL 485 C 1 HETATM 3 C C2 GOL . . . H 3 -8.663 90.246 97.75 1 80.9 ? C2 GOL 485 C 1 HETATM 4 O O2 GOL . . . H 3 -9.511 91.307 97.346 1 85.25 ? O2 GOL 485 C 1 HETATM 5 C C3 GOL . . . H 3 -9.269 89.566 98.975 1 80.56 ? C3 GOL 485 C 1 HETATM 6 O O3 GOL . . . H 3 -10.639 89.305 98.764 1 77.93 ? O3 GOL 485 C 1 # _model_server_stats.io_time_ms 136 _model_server_stats.parse_time_ms 80 _model_server_stats.create_model_time_ms 165 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 6 #