data_3MPA # _model_server_result.job_id hJhclC6hSmxc0bZAWGoGxA _model_server_result.datetime_utc '2024-11-24 21:38:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mpa # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":361}' # _entry.id 3MPA # _exptl.entry_id 3MPA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 377.435 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MPA _cell.length_a 65.471 _cell.length_b 74.144 _cell.length_c 77.184 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MPA _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H16 F N3 O S' _chem_comp.formula_weight 377.435 _chem_comp.id SB2 _chem_comp.mon_nstd_flag . _chem_comp.name 4-[5-(4-FLUORO-PHENYL)-2-(4-METHANESULFINYL-PHENYL)-3H-IMIDAZOL-4-YL]-PYRIDINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O2 S1 SB2 doub 325 n n C1 S1 SB2 sing 326 n n C1 H11 SB2 sing 327 n n C1 H12 SB2 sing 328 n n C1 H13 SB2 sing 329 n n S1 CA3 SB2 sing 330 n n CA1 CA2 SB2 doub 331 n y CA1 CA6 SB2 sing 332 n y CA1 HA1 SB2 sing 333 n n CA2 CA3 SB2 sing 334 n y CA2 HA2 SB2 sing 335 n n CA3 CA4 SB2 doub 336 n y CA4 CA5 SB2 sing 337 n y CA4 HA4 SB2 sing 338 n n CA5 CA6 SB2 doub 339 n y CA5 HA5 SB2 sing 340 n n CA6 CC2 SB2 sing 341 n y NB1 CB2 SB2 doub 342 n y NB1 CB6 SB2 sing 343 n y CB2 CB3 SB2 sing 344 n y CB2 HB2 SB2 sing 345 n n CB3 CB4 SB2 doub 346 n y CB3 HB3 SB2 sing 347 n n CB4 CB5 SB2 sing 348 n y CB4 CC5 SB2 sing 349 n y CB5 CB6 SB2 doub 350 n y CB5 HB5 SB2 sing 351 n n CB6 HB6 SB2 sing 352 n n NC1 CC2 SB2 sing 353 n y NC1 CC5 SB2 sing 354 n y NC1 HN1 SB2 sing 355 n n CC2 NC3 SB2 doub 356 n y NC3 CC4 SB2 sing 357 n y CC4 CC5 SB2 doub 358 n y CC4 CD6 SB2 sing 359 n y CD1 CD2 SB2 doub 360 n y CD1 CD6 SB2 sing 361 n y CD1 HD1 SB2 sing 362 n n CD2 CD3 SB2 sing 363 n y CD2 HD2 SB2 sing 364 n n CD3 CD4 SB2 doub 365 n y CD3 FD3 SB2 sing 366 n n CD4 CD5 SB2 sing 367 n y CD4 HD4 SB2 sing 368 n n CD5 CD6 SB2 doub 369 n y CD5 HD5 SB2 sing 370 n n # _atom_sites.entry_id 3MPA _atom_sites.fract_transf_matrix[1][1] 0.015274 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013487 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012956 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SB2 A 1 361 1 SB2 SB2 . C 3 BOG A 1 362 1 BOG BOG . D 4 HOH A 1 363 1 HOH HOH . D 4 HOH A 2 364 2 HOH HOH . D 4 HOH A 3 365 3 HOH HOH . D 4 HOH A 4 366 4 HOH HOH . D 4 HOH A 5 367 5 HOH HOH . D 4 HOH A 6 368 6 HOH HOH . D 4 HOH A 7 369 7 HOH HOH . D 4 HOH A 8 370 8 HOH HOH . D 4 HOH A 9 371 9 HOH HOH . D 4 HOH A 10 372 10 HOH HOH . D 4 HOH A 11 373 11 HOH HOH . D 4 HOH A 12 374 12 HOH HOH . D 4 HOH A 13 375 13 HOH HOH . D 4 HOH A 14 376 14 HOH HOH . D 4 HOH A 15 377 15 HOH HOH . D 4 HOH A 16 378 16 HOH HOH . D 4 HOH A 17 379 17 HOH HOH . D 4 HOH A 18 380 18 HOH HOH . D 4 HOH A 19 381 19 HOH HOH . D 4 HOH A 20 382 20 HOH HOH . D 4 HOH A 21 383 21 HOH HOH . D 4 HOH A 22 384 22 HOH HOH . D 4 HOH A 23 385 23 HOH HOH . D 4 HOH A 24 386 24 HOH HOH . D 4 HOH A 25 387 25 HOH HOH . D 4 HOH A 26 388 26 HOH HOH . D 4 HOH A 27 389 27 HOH HOH . D 4 HOH A 28 390 28 HOH HOH . D 4 HOH A 29 391 29 HOH HOH . D 4 HOH A 30 392 30 HOH HOH . D 4 HOH A 31 393 31 HOH HOH . D 4 HOH A 32 394 32 HOH HOH . D 4 HOH A 33 395 33 HOH HOH . D 4 HOH A 34 396 34 HOH HOH . D 4 HOH A 35 397 35 HOH HOH . D 4 HOH A 36 398 36 HOH HOH . D 4 HOH A 37 399 37 HOH HOH . D 4 HOH A 38 400 38 HOH HOH . D 4 HOH A 39 401 39 HOH HOH . D 4 HOH A 40 402 40 HOH HOH . D 4 HOH A 41 403 41 HOH HOH . D 4 HOH A 42 404 42 HOH HOH . D 4 HOH A 43 405 43 HOH HOH . D 4 HOH A 44 406 44 HOH HOH . D 4 HOH A 45 407 45 HOH HOH . D 4 HOH A 46 408 46 HOH HOH . D 4 HOH A 47 409 47 HOH HOH . D 4 HOH A 48 410 48 HOH HOH . D 4 HOH A 49 411 49 HOH HOH . D 4 HOH A 50 412 50 HOH HOH . D 4 HOH A 51 413 51 HOH HOH . D 4 HOH A 52 414 52 HOH HOH . D 4 HOH A 53 415 53 HOH HOH . D 4 HOH A 54 416 54 HOH HOH . D 4 HOH A 55 417 55 HOH HOH . D 4 HOH A 56 418 56 HOH HOH . D 4 HOH A 57 419 57 HOH HOH . D 4 HOH A 58 420 58 HOH HOH . D 4 HOH A 59 421 59 HOH HOH . D 4 HOH A 60 422 60 HOH HOH . D 4 HOH A 61 423 61 HOH HOH . D 4 HOH A 62 424 62 HOH HOH . D 4 HOH A 63 425 63 HOH HOH . D 4 HOH A 64 426 64 HOH HOH . D 4 HOH A 65 427 65 HOH HOH . D 4 HOH A 66 428 66 HOH HOH . D 4 HOH A 67 429 67 HOH HOH . D 4 HOH A 68 430 68 HOH HOH . D 4 HOH A 69 431 69 HOH HOH . D 4 HOH A 70 432 70 HOH HOH . D 4 HOH A 71 433 71 HOH HOH . D 4 HOH A 72 434 72 HOH HOH . D 4 HOH A 73 435 73 HOH HOH . D 4 HOH A 74 436 74 HOH HOH . D 4 HOH A 75 437 75 HOH HOH . D 4 HOH A 76 438 76 HOH HOH . D 4 HOH A 77 439 77 HOH HOH . D 4 HOH A 78 440 78 HOH HOH . D 4 HOH A 79 441 79 HOH HOH . D 4 HOH A 80 442 80 HOH HOH . D 4 HOH A 81 443 81 HOH HOH . D 4 HOH A 82 444 82 HOH HOH . D 4 HOH A 83 445 83 HOH HOH . D 4 HOH A 84 446 84 HOH HOH . D 4 HOH A 85 447 85 HOH HOH . D 4 HOH A 86 448 86 HOH HOH . D 4 HOH A 87 449 87 HOH HOH . D 4 HOH A 88 450 88 HOH HOH . D 4 HOH A 89 451 89 HOH HOH . D 4 HOH A 90 452 90 HOH HOH . D 4 HOH A 91 453 91 HOH HOH . D 4 HOH A 92 454 92 HOH HOH . D 4 HOH A 93 455 93 HOH HOH . D 4 HOH A 94 456 94 HOH HOH . D 4 HOH A 95 457 95 HOH HOH . D 4 HOH A 96 458 96 HOH HOH . D 4 HOH A 97 459 97 HOH HOH . D 4 HOH A 98 460 98 HOH HOH . D 4 HOH A 99 461 99 HOH HOH . D 4 HOH A 100 462 100 HOH HOH . D 4 HOH A 101 463 101 HOH HOH . D 4 HOH A 102 464 102 HOH HOH . D 4 HOH A 103 465 103 HOH HOH . D 4 HOH A 104 466 104 HOH HOH . D 4 HOH A 105 467 105 HOH HOH . D 4 HOH A 106 468 106 HOH HOH . D 4 HOH A 107 469 107 HOH HOH . D 4 HOH A 108 470 108 HOH HOH . D 4 HOH A 109 471 109 HOH HOH . D 4 HOH A 110 472 110 HOH HOH . D 4 HOH A 111 473 111 HOH HOH . D 4 HOH A 112 474 112 HOH HOH . D 4 HOH A 113 475 113 HOH HOH . D 4 HOH A 114 476 114 HOH HOH . D 4 HOH A 115 477 115 HOH HOH . D 4 HOH A 116 478 116 HOH HOH . D 4 HOH A 117 479 117 HOH HOH . D 4 HOH A 118 480 118 HOH HOH . D 4 HOH A 119 481 119 HOH HOH . D 4 HOH A 120 482 120 HOH HOH . D 4 HOH A 121 483 121 HOH HOH . D 4 HOH A 122 484 122 HOH HOH . D 4 HOH A 123 485 123 HOH HOH . D 4 HOH A 124 486 124 HOH HOH . D 4 HOH A 125 487 125 HOH HOH . D 4 HOH A 126 488 126 HOH HOH . D 4 HOH A 127 489 127 HOH HOH . D 4 HOH A 128 490 128 HOH HOH . D 4 HOH A 129 491 129 HOH HOH . D 4 HOH A 130 492 130 HOH HOH . D 4 HOH A 131 493 131 HOH HOH . D 4 HOH A 132 494 132 HOH HOH . D 4 HOH A 133 495 133 HOH HOH . D 4 HOH A 134 496 134 HOH HOH . D 4 HOH A 135 497 135 HOH HOH . D 4 HOH A 136 498 136 HOH HOH . D 4 HOH A 137 499 137 HOH HOH . D 4 HOH A 138 500 138 HOH HOH . D 4 HOH A 139 501 139 HOH HOH . D 4 HOH A 140 502 140 HOH HOH . D 4 HOH A 141 503 141 HOH HOH . D 4 HOH A 142 504 142 HOH HOH . D 4 HOH A 143 505 143 HOH HOH . D 4 HOH A 144 506 144 HOH HOH . D 4 HOH A 145 507 145 HOH HOH . D 4 HOH A 146 508 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O2 SB2 . . . B 2 2.062 -5.926 -24.207 1 45.8 ? O2 SB2 361 A 1 HETATM 2 C C1 SB2 . . . B 2 3.431 -6.13 -21.726 1 44.35 ? C1 SB2 361 A 1 HETATM 3 S S1 SB2 . . . B 2 1.809 -6.329 -22.467 1 44.09 ? S1 SB2 361 A 1 HETATM 4 C CA1 SB2 . . . B 2 0.153 -2.671 -21.883 1 41.6 ? CA1 SB2 361 A 1 HETATM 5 C CA2 SB2 . . . B 2 0.983 -3.704 -22.311 1 41.64 ? CA2 SB2 361 A 1 HETATM 6 C CA3 SB2 . . . B 2 0.729 -5.001 -21.877 1 42.92 ? CA3 SB2 361 A 1 HETATM 7 C CA4 SB2 . . . B 2 -0.345 -5.255 -21.016 1 43.19 ? CA4 SB2 361 A 1 HETATM 8 C CA5 SB2 . . . B 2 -1.179 -4.216 -20.591 1 43.08 ? CA5 SB2 361 A 1 HETATM 9 C CA6 SB2 . . . B 2 -0.926 -2.912 -21.033 1 39.36 ? CA6 SB2 361 A 1 HETATM 10 N NB1 SB2 . . . B 2 -3.119 4.325 -21.891 1 30.88 ? NB1 SB2 361 A 1 HETATM 11 C CB2 SB2 . . . B 2 -3.137 3.351 -22.805 1 30.06 ? CB2 SB2 361 A 1 HETATM 12 C CB3 SB2 . . . B 2 -2.955 2.029 -22.403 1 33.04 ? CB3 SB2 361 A 1 HETATM 13 C CB4 SB2 . . . B 2 -2.816 1.721 -21.043 1 34.09 ? CB4 SB2 361 A 1 HETATM 14 C CB5 SB2 . . . B 2 -2.803 2.765 -20.113 1 33.36 ? CB5 SB2 361 A 1 HETATM 15 C CB6 SB2 . . . B 2 -2.956 4.078 -20.57 1 32.3 ? CB6 SB2 361 A 1 HETATM 16 N NC1 SB2 . . . B 2 -1.747 -0.526 -21.273 1 34.23 ? NC1 SB2 361 A 1 HETATM 17 C CC2 SB2 . . . B 2 -1.737 -1.716 -20.637 1 38.42 ? CC2 SB2 361 A 1 HETATM 18 N NC3 SB2 . . . B 2 -2.545 -1.753 -19.538 1 34.84 ? NC3 SB2 361 A 1 HETATM 19 C CC4 SB2 . . . B 2 -3.111 -0.532 -19.514 1 34.66 ? CC4 SB2 361 A 1 HETATM 20 C CC5 SB2 . . . B 2 -2.586 0.3 -20.633 1 33.83 ? CC5 SB2 361 A 1 HETATM 21 C CD1 SB2 . . . B 2 -3.644 -0.393 -17.104 1 34.41 ? CD1 SB2 361 A 1 HETATM 22 C CD2 SB2 . . . B 2 -4.469 -0.002 -16.066 1 34.49 ? CD2 SB2 361 A 1 HETATM 23 C CD3 SB2 . . . B 2 -5.655 0.657 -16.348 1 33.75 ? CD3 SB2 361 A 1 HETATM 24 C CD4 SB2 . . . B 2 -6.043 0.916 -17.66 1 35.04 ? CD4 SB2 361 A 1 HETATM 25 C CD5 SB2 . . . B 2 -5.216 0.524 -18.712 1 34.93 ? CD5 SB2 361 A 1 HETATM 26 C CD6 SB2 . . . B 2 -4.03 -0.152 -18.423 1 35.54 ? CD6 SB2 361 A 1 HETATM 27 F FD3 SB2 . . . B 2 -6.418 1.048 -15.325 1 35.9 ? FD3 SB2 361 A 1 # _model_server_stats.io_time_ms 45 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 27 #