data_3MPG # _model_server_result.job_id IHIdV4YygmmvZDXihggJUw _model_server_result.datetime_utc '2024-10-13 19:19:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mpg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":430}' # _entry.id 3MPG # _exptl.entry_id 3MPG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.21 _cell.angle_gamma 90 _cell.entry_id 3MPG _cell.length_a 50.36 _cell.length_b 80.784 _cell.length_c 104.772 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MPG _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 59 A HIS 59 1_555 C ZN ZN . A ZN 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc2 A NE2 HIS 61 A HIS 61 1_555 C ZN ZN . A ZN 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc3 A OD2 ASP 151 A ASP 151 1_555 C ZN ZN . A ZN 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.463 ? metalc ? metalc4 A OD1 ASP 151 A ASP 151 1_555 D ZN ZN . A ZN 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.475 ? metalc ? metalc5 A ND1 HIS 178 A HIS 178 1_555 D ZN ZN . A ZN 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.433 ? metalc ? metalc6 A NE2 HIS 231 A HIS 231 1_555 D ZN ZN . A ZN 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc7 A OD2 ASP 304 A ASP 304 1_555 C ZN ZN . A ZN 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.364 ? metalc ? metalc8 B NE2 HIS 59 B HIS 59 1_555 E ZN ZN . B ZN 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc9 B NE2 HIS 61 B HIS 61 1_555 E ZN ZN . B ZN 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.241 ? metalc ? metalc10 B OD2 ASP 151 B ASP 151 1_555 E ZN ZN . B ZN 429 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc11 B OD1 ASP 151 B ASP 151 1_555 F ZN ZN . B ZN 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.569 ? metalc ? metalc12 B ND1 HIS 178 B HIS 178 1_555 F ZN ZN . B ZN 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.472 ? metalc ? metalc13 B NE2 HIS 231 B HIS 231 1_555 F ZN ZN . B ZN 430 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3MPG _atom_sites.fract_transf_matrix[1][1] 0.019857 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003576 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012379 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009698 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 429 1 ZN ZN . D 2 ZN A 1 430 2 ZN ZN . E 2 ZN B 1 429 3 ZN ZN . F 2 ZN B 1 430 4 ZN ZN . G 3 HOH A 1 431 1 HOH WAT . G 3 HOH A 2 432 2 HOH WAT . G 3 HOH A 3 433 3 HOH WAT . G 3 HOH A 4 434 5 HOH WAT . G 3 HOH A 5 435 8 HOH WAT . G 3 HOH A 6 436 9 HOH WAT . G 3 HOH A 7 437 10 HOH WAT . G 3 HOH A 8 438 11 HOH WAT . G 3 HOH A 9 439 12 HOH WAT . G 3 HOH A 10 440 13 HOH WAT . G 3 HOH A 11 441 14 HOH WAT . G 3 HOH A 12 442 16 HOH WAT . G 3 HOH A 13 443 17 HOH WAT . G 3 HOH A 14 444 21 HOH WAT . G 3 HOH A 15 445 23 HOH WAT . G 3 HOH A 16 446 24 HOH WAT . G 3 HOH A 17 447 26 HOH WAT . G 3 HOH A 18 448 28 HOH WAT . G 3 HOH A 19 449 29 HOH WAT . G 3 HOH A 20 450 30 HOH WAT . G 3 HOH A 21 451 31 HOH WAT . G 3 HOH A 22 452 33 HOH WAT . G 3 HOH A 23 453 34 HOH WAT . G 3 HOH A 24 454 36 HOH WAT . G 3 HOH A 25 455 37 HOH WAT . G 3 HOH A 26 456 38 HOH WAT . G 3 HOH A 27 457 39 HOH WAT . G 3 HOH A 28 458 40 HOH WAT . G 3 HOH A 29 459 42 HOH WAT . G 3 HOH A 30 460 45 HOH WAT . G 3 HOH A 31 461 46 HOH WAT . G 3 HOH A 32 462 47 HOH WAT . G 3 HOH A 33 463 48 HOH WAT . G 3 HOH A 34 464 49 HOH WAT . G 3 HOH A 35 465 50 HOH WAT . G 3 HOH A 36 466 51 HOH WAT . G 3 HOH A 37 467 54 HOH WAT . G 3 HOH A 38 468 55 HOH WAT . G 3 HOH A 39 469 56 HOH WAT . G 3 HOH A 40 470 57 HOH WAT . G 3 HOH A 41 471 58 HOH WAT . G 3 HOH A 42 472 60 HOH WAT . G 3 HOH A 43 473 61 HOH WAT . G 3 HOH A 44 474 62 HOH WAT . G 3 HOH A 45 475 63 HOH WAT . G 3 HOH A 46 476 65 HOH WAT . G 3 HOH A 47 477 66 HOH WAT . G 3 HOH A 48 478 67 HOH WAT . G 3 HOH A 49 479 70 HOH WAT . G 3 HOH A 50 480 71 HOH WAT . G 3 HOH A 51 481 72 HOH WAT . G 3 HOH A 52 482 74 HOH WAT . G 3 HOH A 53 483 76 HOH WAT . G 3 HOH A 54 484 77 HOH WAT . G 3 HOH A 55 485 80 HOH WAT . G 3 HOH A 56 486 82 HOH WAT . G 3 HOH A 57 487 84 HOH WAT . G 3 HOH A 58 488 85 HOH WAT . G 3 HOH A 59 489 86 HOH WAT . G 3 HOH A 60 490 89 HOH WAT . G 3 HOH A 61 491 93 HOH WAT . G 3 HOH A 62 492 95 HOH WAT . G 3 HOH A 63 493 96 HOH WAT . G 3 HOH A 64 494 101 HOH WAT . G 3 HOH A 65 495 102 HOH WAT . G 3 HOH A 66 496 103 HOH WAT . G 3 HOH A 67 497 105 HOH WAT . G 3 HOH A 68 498 106 HOH WAT . G 3 HOH A 69 499 109 HOH WAT . G 3 HOH A 70 500 110 HOH WAT . G 3 HOH A 71 501 112 HOH WAT . G 3 HOH A 72 502 117 HOH WAT . G 3 HOH A 73 503 118 HOH WAT . G 3 HOH A 74 504 120 HOH WAT . G 3 HOH A 75 505 126 HOH WAT . G 3 HOH A 76 506 128 HOH WAT . G 3 HOH A 77 507 129 HOH WAT . G 3 HOH A 78 508 131 HOH WAT . G 3 HOH A 79 509 132 HOH WAT . G 3 HOH A 80 510 133 HOH WAT . G 3 HOH A 81 511 137 HOH WAT . G 3 HOH A 82 512 138 HOH WAT . G 3 HOH A 83 513 139 HOH WAT . G 3 HOH A 84 514 140 HOH WAT . G 3 HOH A 85 515 141 HOH WAT . G 3 HOH A 86 516 143 HOH WAT . G 3 HOH A 87 517 145 HOH WAT . G 3 HOH A 88 518 149 HOH WAT . G 3 HOH A 89 519 151 HOH WAT . G 3 HOH A 90 520 152 HOH WAT . G 3 HOH A 91 521 153 HOH WAT . G 3 HOH A 92 522 155 HOH WAT . G 3 HOH A 93 523 156 HOH WAT . G 3 HOH A 94 524 157 HOH WAT . G 3 HOH A 95 525 158 HOH WAT . G 3 HOH A 96 526 159 HOH WAT . G 3 HOH A 97 527 160 HOH WAT . G 3 HOH A 98 528 161 HOH WAT . G 3 HOH A 99 529 162 HOH WAT . G 3 HOH A 100 530 163 HOH WAT . G 3 HOH A 101 531 165 HOH WAT . G 3 HOH A 102 532 166 HOH WAT . G 3 HOH A 103 533 167 HOH WAT . G 3 HOH A 104 534 168 HOH WAT . G 3 HOH A 105 535 169 HOH WAT . G 3 HOH A 106 536 170 HOH WAT . G 3 HOH A 107 537 171 HOH WAT . G 3 HOH A 108 538 172 HOH WAT . G 3 HOH A 109 539 174 HOH WAT . G 3 HOH A 110 540 175 HOH WAT . G 3 HOH A 111 541 178 HOH WAT . G 3 HOH A 112 542 180 HOH WAT . H 3 HOH B 1 431 4 HOH WAT . H 3 HOH B 2 432 6 HOH WAT . H 3 HOH B 3 433 7 HOH WAT . H 3 HOH B 4 434 15 HOH WAT . H 3 HOH B 5 435 18 HOH WAT . H 3 HOH B 6 436 19 HOH WAT . H 3 HOH B 7 437 20 HOH WAT . H 3 HOH B 8 438 22 HOH WAT . H 3 HOH B 9 439 25 HOH WAT . H 3 HOH B 10 440 27 HOH WAT . H 3 HOH B 11 441 32 HOH WAT . H 3 HOH B 12 442 35 HOH WAT . H 3 HOH B 13 443 41 HOH WAT . H 3 HOH B 14 444 43 HOH WAT . H 3 HOH B 15 445 44 HOH WAT . H 3 HOH B 16 446 52 HOH WAT . H 3 HOH B 17 447 53 HOH WAT . H 3 HOH B 18 448 59 HOH WAT . H 3 HOH B 19 449 64 HOH WAT . H 3 HOH B 20 450 68 HOH WAT . H 3 HOH B 21 451 69 HOH WAT . H 3 HOH B 22 452 73 HOH WAT . H 3 HOH B 23 453 75 HOH WAT . H 3 HOH B 24 454 78 HOH WAT . H 3 HOH B 25 455 79 HOH WAT . H 3 HOH B 26 456 81 HOH WAT . H 3 HOH B 27 457 83 HOH WAT . H 3 HOH B 28 458 87 HOH WAT . H 3 HOH B 29 459 88 HOH WAT . H 3 HOH B 30 460 90 HOH WAT . H 3 HOH B 31 461 91 HOH WAT . H 3 HOH B 32 462 92 HOH WAT . H 3 HOH B 33 463 94 HOH WAT . H 3 HOH B 34 464 97 HOH WAT . H 3 HOH B 35 465 98 HOH WAT . H 3 HOH B 36 466 99 HOH WAT . H 3 HOH B 37 467 100 HOH WAT . H 3 HOH B 38 468 104 HOH WAT . H 3 HOH B 39 469 107 HOH WAT . H 3 HOH B 40 470 108 HOH WAT . H 3 HOH B 41 471 111 HOH WAT . H 3 HOH B 42 472 113 HOH WAT . H 3 HOH B 43 473 114 HOH WAT . H 3 HOH B 44 474 115 HOH WAT . H 3 HOH B 45 475 116 HOH WAT . H 3 HOH B 46 476 119 HOH WAT . H 3 HOH B 47 477 121 HOH WAT . H 3 HOH B 48 478 122 HOH WAT . H 3 HOH B 49 479 123 HOH WAT . H 3 HOH B 50 480 124 HOH WAT . H 3 HOH B 51 481 125 HOH WAT . H 3 HOH B 52 482 127 HOH WAT . H 3 HOH B 53 483 130 HOH WAT . H 3 HOH B 54 484 134 HOH WAT . H 3 HOH B 55 485 135 HOH WAT . H 3 HOH B 56 486 136 HOH WAT . H 3 HOH B 57 487 142 HOH WAT . H 3 HOH B 58 488 144 HOH WAT . H 3 HOH B 59 489 146 HOH WAT . H 3 HOH B 60 490 147 HOH WAT . H 3 HOH B 61 491 148 HOH WAT . H 3 HOH B 62 492 150 HOH WAT . H 3 HOH B 63 493 154 HOH WAT . H 3 HOH B 64 494 164 HOH WAT . H 3 HOH B 65 495 173 HOH WAT . H 3 HOH B 66 496 176 HOH WAT . H 3 HOH B 67 497 177 HOH WAT . H 3 HOH B 68 498 179 HOH WAT . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 13.994 _atom_site.Cartn_y 12.97 _atom_site.Cartn_z 16.785 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 53.49 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 430 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 51 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 353 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #