data_3MPN # _model_server_result.job_id UeDDZhVMAo8qPin04026KA _model_server_result.datetime_utc '2024-11-21 13:39:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mpn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":752}' # _entry.id 3MPN # _exptl.entry_id 3MPN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.35 _cell.angle_gamma 90 _cell.entry_id 3MPN _cell.length_a 87.261 _cell.length_b 86.222 _cell.length_c 80.636 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MPN _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 software_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F,G,H,I,J,K,L,M 1 1,2 A,B,C,D,E,F,G,H,I,J,K,L,M 2 1 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_656 -x+1,y,-z+1 -1 0 0 0 1 0 0 0 -1 79.742541 0 80.284726 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 J N N ? 6 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 173 A CYS 177 1_555 D S1 MTN . A MTN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? metalc ? metalc1 A O GLY 16 A GLY 20 1_555 J NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.153 ? metalc ? metalc2 A O ALA 18 A ALA 22 1_555 K NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc3 A O VAL 19 A VAL 23 1_555 J NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc4 A OD1 ASN 23 A ASN 27 1_555 K NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.283 ? metalc ? metalc5 A O THR 250 A THR 254 1_555 K NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.297 ? metalc ? metalc6 A OG1 THR 250 A THR 254 1_555 K NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.392 ? metalc ? metalc7 A OD1 ASN 282 A ASN 286 1_555 K NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc8 A O ALA 347 A ALA 351 1_555 J NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc9 A OG1 THR 350 A THR 354 1_555 J NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.261 ? metalc ? metalc10 A OG SER 351 A SER 355 1_555 J NA NA . A NA 751 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.319 ? metalc ? metalc11 C OXT LEU . A LEU 601 1_555 K NA NA . A NA 752 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3MPN _atom_sites.fract_transf_matrix[1][1] 0.01146 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001073 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011598 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012456 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 701 701 BOG BOG . C 3 LEU A 1 601 601 LEU LEU . D 4 MTN A 1 801 801 MTN MTN . E 5 CL A 1 512 512 CL CL . F 2 BOG A 1 703 703 BOG BOG . G 2 BOG A 1 704 704 BOG BOG . H 2 BOG A 1 705 705 BOG BOG . I 2 BOG A 1 702 702 BOG BOG . J 6 NA A 1 751 751 NA NA . K 6 NA A 1 752 752 NA NA . L 2 BOG A 1 1 1 BOG BOG . M 7 HOH A 1 2 2 HOH HOH . M 7 HOH A 2 3 3 HOH HOH . M 7 HOH A 3 4 4 HOH HOH . M 7 HOH A 4 513 513 HOH HOH . M 7 HOH A 5 514 514 HOH HOH . M 7 HOH A 6 515 515 HOH HOH . M 7 HOH A 7 516 516 HOH HOH . M 7 HOH A 8 517 517 HOH HOH . M 7 HOH A 9 518 518 HOH HOH . M 7 HOH A 10 519 519 HOH HOH . M 7 HOH A 11 520 520 HOH HOH . M 7 HOH A 12 521 521 HOH HOH . M 7 HOH A 13 522 522 HOH HOH . M 7 HOH A 14 523 523 HOH HOH . M 7 HOH A 15 524 524 HOH HOH . M 7 HOH A 16 525 525 HOH HOH . M 7 HOH A 17 526 526 HOH HOH . M 7 HOH A 18 527 527 HOH HOH . M 7 HOH A 19 528 528 HOH HOH . M 7 HOH A 20 529 529 HOH HOH . M 7 HOH A 21 530 530 HOH HOH . M 7 HOH A 22 531 531 HOH HOH . M 7 HOH A 23 532 532 HOH HOH . M 7 HOH A 24 533 533 HOH HOH . M 7 HOH A 25 534 534 HOH HOH . M 7 HOH A 26 535 535 HOH HOH . M 7 HOH A 27 536 536 HOH HOH . M 7 HOH A 28 537 537 HOH HOH . M 7 HOH A 29 538 538 HOH HOH . M 7 HOH A 30 539 539 HOH HOH . M 7 HOH A 31 540 540 HOH HOH . M 7 HOH A 32 541 541 HOH HOH . M 7 HOH A 33 542 542 HOH HOH . M 7 HOH A 34 543 543 HOH HOH . M 7 HOH A 35 544 544 HOH HOH . M 7 HOH A 36 545 545 HOH HOH . M 7 HOH A 37 546 546 HOH HOH . M 7 HOH A 38 547 547 HOH HOH . M 7 HOH A 39 548 548 HOH HOH . M 7 HOH A 40 549 549 HOH HOH . M 7 HOH A 41 550 550 HOH HOH . M 7 HOH A 42 551 551 HOH HOH . M 7 HOH A 43 552 552 HOH HOH . M 7 HOH A 44 553 553 HOH HOH . M 7 HOH A 45 554 554 HOH HOH . M 7 HOH A 46 555 555 HOH HOH . M 7 HOH A 47 556 556 HOH HOH . M 7 HOH A 48 557 557 HOH HOH . M 7 HOH A 49 558 558 HOH HOH . M 7 HOH A 50 559 559 HOH HOH . M 7 HOH A 51 560 560 HOH HOH . M 7 HOH A 52 561 561 HOH HOH . M 7 HOH A 53 562 562 HOH HOH . M 7 HOH A 54 563 563 HOH HOH . M 7 HOH A 55 564 564 HOH HOH . M 7 HOH A 56 565 565 HOH HOH . M 7 HOH A 57 566 566 HOH HOH . M 7 HOH A 58 567 567 HOH HOH . M 7 HOH A 59 568 568 HOH HOH . M 7 HOH A 60 569 569 HOH HOH . M 7 HOH A 61 570 570 HOH HOH . M 7 HOH A 62 571 571 HOH HOH . M 7 HOH A 63 572 572 HOH HOH . M 7 HOH A 64 573 573 HOH HOH . M 7 HOH A 65 574 574 HOH HOH . M 7 HOH A 66 575 575 HOH HOH . M 7 HOH A 67 576 576 HOH HOH . M 7 HOH A 68 577 577 HOH HOH . M 7 HOH A 69 578 578 HOH HOH . M 7 HOH A 70 579 579 HOH HOH . M 7 HOH A 71 580 580 HOH HOH . M 7 HOH A 72 581 581 HOH HOH . M 7 HOH A 73 582 582 HOH HOH . M 7 HOH A 74 583 583 HOH HOH . M 7 HOH A 75 584 584 HOH HOH . M 7 HOH A 76 585 585 HOH HOH . M 7 HOH A 77 586 586 HOH HOH . M 7 HOH A 78 587 587 HOH HOH . M 7 HOH A 79 588 588 HOH HOH . M 7 HOH A 80 589 589 HOH HOH . M 7 HOH A 81 590 590 HOH HOH . M 7 HOH A 82 591 591 HOH HOH . M 7 HOH A 83 592 592 HOH HOH . M 7 HOH A 84 593 593 HOH HOH . M 7 HOH A 85 594 594 HOH HOH . M 7 HOH A 86 595 595 HOH HOH . M 7 HOH A 87 596 596 HOH HOH . M 7 HOH A 88 597 597 HOH HOH . M 7 HOH A 89 598 598 HOH HOH . M 7 HOH A 90 599 599 HOH HOH . M 7 HOH A 91 600 600 HOH HOH . M 7 HOH A 92 602 602 HOH HOH . M 7 HOH A 93 603 603 HOH HOH . M 7 HOH A 94 604 604 HOH HOH . M 7 HOH A 95 605 605 HOH HOH . M 7 HOH A 96 606 606 HOH HOH . M 7 HOH A 97 607 607 HOH HOH . M 7 HOH A 98 608 608 HOH HOH . M 7 HOH A 99 609 609 HOH HOH . M 7 HOH A 100 610 610 HOH HOH . M 7 HOH A 101 611 611 HOH HOH . M 7 HOH A 102 612 612 HOH HOH . M 7 HOH A 103 613 613 HOH HOH . M 7 HOH A 104 614 614 HOH HOH . M 7 HOH A 105 615 615 HOH HOH . M 7 HOH A 106 616 616 HOH HOH . M 7 HOH A 107 617 617 HOH HOH . M 7 HOH A 108 618 618 HOH HOH . M 7 HOH A 109 619 619 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 6 _atom_site.Cartn_x 22.689 _atom_site.Cartn_y 30.913 _atom_site.Cartn_z 15.956 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 15.99 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 752 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #