data_3MPT # _model_server_result.job_id B6Q3wqAN6caTLCJjEKcsYw _model_server_result.datetime_utc '2024-10-20 20:42:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mpt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":362}' # _entry.id 3MPT # _exptl.entry_id 3MPT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MPT _cell.length_a 45.376 _cell.length_b 85.859 _cell.length_c 124.463 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MPT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 170 n n C1 C2 GOL sing 171 n n C1 H11 GOL sing 172 n n C1 H12 GOL sing 173 n n O1 HO1 GOL sing 174 n n C2 O2 GOL sing 175 n n C2 C3 GOL sing 176 n n C2 H2 GOL sing 177 n n O2 HO2 GOL sing 178 n n C3 O3 GOL sing 179 n n C3 H31 GOL sing 180 n n C3 H32 GOL sing 181 n n O3 HO3 GOL sing 182 n n # _atom_sites.entry_id 3MPT _atom_sites.fract_transf_matrix[1][1] 0.022038 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011647 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008035 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 1GK A 1 361 1 1GK 1GK . C 3 GOL A 1 362 1 GOL GOL . D 3 GOL A 1 363 2 GOL GOL . E 3 GOL A 1 364 3 GOL GOL . F 4 HOH A 1 365 1 HOH HOH . F 4 HOH A 2 366 2 HOH HOH . F 4 HOH A 3 367 3 HOH HOH . F 4 HOH A 4 368 4 HOH HOH . F 4 HOH A 5 369 5 HOH HOH . F 4 HOH A 6 370 6 HOH HOH . F 4 HOH A 7 371 7 HOH HOH . F 4 HOH A 8 372 8 HOH HOH . F 4 HOH A 9 373 9 HOH HOH . F 4 HOH A 10 374 10 HOH HOH . F 4 HOH A 11 375 11 HOH HOH . F 4 HOH A 12 376 12 HOH HOH . F 4 HOH A 13 377 13 HOH HOH . F 4 HOH A 14 378 14 HOH HOH . F 4 HOH A 15 379 15 HOH HOH . F 4 HOH A 16 380 16 HOH HOH . F 4 HOH A 17 381 17 HOH HOH . F 4 HOH A 18 382 18 HOH HOH . F 4 HOH A 19 383 19 HOH HOH . F 4 HOH A 20 384 20 HOH HOH . F 4 HOH A 21 385 21 HOH HOH . F 4 HOH A 22 386 22 HOH HOH . F 4 HOH A 23 387 23 HOH HOH . F 4 HOH A 24 388 24 HOH HOH . F 4 HOH A 25 389 25 HOH HOH . F 4 HOH A 26 390 26 HOH HOH . F 4 HOH A 27 391 27 HOH HOH . F 4 HOH A 28 392 28 HOH HOH . F 4 HOH A 29 393 29 HOH HOH . F 4 HOH A 30 394 30 HOH HOH . F 4 HOH A 31 395 31 HOH HOH . F 4 HOH A 32 396 32 HOH HOH . F 4 HOH A 33 397 33 HOH HOH . F 4 HOH A 34 398 34 HOH HOH . F 4 HOH A 35 399 35 HOH HOH . F 4 HOH A 36 400 36 HOH HOH . F 4 HOH A 37 401 37 HOH HOH . F 4 HOH A 38 402 38 HOH HOH . F 4 HOH A 39 403 39 HOH HOH . F 4 HOH A 40 404 40 HOH HOH . F 4 HOH A 41 405 41 HOH HOH . F 4 HOH A 42 406 42 HOH HOH . F 4 HOH A 43 407 43 HOH HOH . F 4 HOH A 44 408 44 HOH HOH . F 4 HOH A 45 409 45 HOH HOH . F 4 HOH A 46 410 46 HOH HOH . F 4 HOH A 47 411 47 HOH HOH . F 4 HOH A 48 412 48 HOH HOH . F 4 HOH A 49 413 49 HOH HOH . F 4 HOH A 50 414 50 HOH HOH . F 4 HOH A 51 415 51 HOH HOH . F 4 HOH A 52 416 52 HOH HOH . F 4 HOH A 53 417 53 HOH HOH . F 4 HOH A 54 418 54 HOH HOH . F 4 HOH A 55 419 55 HOH HOH . F 4 HOH A 56 420 56 HOH HOH . F 4 HOH A 57 421 57 HOH HOH . F 4 HOH A 58 422 58 HOH HOH . F 4 HOH A 59 423 59 HOH HOH . F 4 HOH A 60 424 60 HOH HOH . F 4 HOH A 61 425 61 HOH HOH . F 4 HOH A 62 426 62 HOH HOH . F 4 HOH A 63 427 63 HOH HOH . F 4 HOH A 64 428 64 HOH HOH . F 4 HOH A 65 429 65 HOH HOH . F 4 HOH A 66 430 66 HOH HOH . F 4 HOH A 67 431 67 HOH HOH . F 4 HOH A 68 432 68 HOH HOH . F 4 HOH A 69 433 69 HOH HOH . F 4 HOH A 70 434 70 HOH HOH . F 4 HOH A 71 435 71 HOH HOH . F 4 HOH A 72 436 72 HOH HOH . F 4 HOH A 73 437 73 HOH HOH . F 4 HOH A 74 438 74 HOH HOH . F 4 HOH A 75 439 75 HOH HOH . F 4 HOH A 76 440 76 HOH HOH . F 4 HOH A 77 441 77 HOH HOH . F 4 HOH A 78 442 78 HOH HOH . F 4 HOH A 79 443 79 HOH HOH . F 4 HOH A 80 444 80 HOH HOH . F 4 HOH A 81 445 81 HOH HOH . F 4 HOH A 82 446 82 HOH HOH . F 4 HOH A 83 447 83 HOH HOH . F 4 HOH A 84 448 84 HOH HOH . F 4 HOH A 85 449 85 HOH HOH . F 4 HOH A 86 450 86 HOH HOH . F 4 HOH A 87 451 87 HOH HOH . F 4 HOH A 88 452 88 HOH HOH . F 4 HOH A 89 453 89 HOH HOH . F 4 HOH A 90 454 90 HOH HOH . F 4 HOH A 91 455 91 HOH HOH . F 4 HOH A 92 456 92 HOH HOH . F 4 HOH A 93 457 93 HOH HOH . F 4 HOH A 94 458 94 HOH HOH . F 4 HOH A 95 459 95 HOH HOH . F 4 HOH A 96 460 96 HOH HOH . F 4 HOH A 97 461 97 HOH HOH . F 4 HOH A 98 462 98 HOH HOH . F 4 HOH A 99 463 99 HOH HOH . F 4 HOH A 100 464 100 HOH HOH . F 4 HOH A 101 465 101 HOH HOH . F 4 HOH A 102 466 102 HOH HOH . F 4 HOH A 103 467 103 HOH HOH . F 4 HOH A 104 468 104 HOH HOH . F 4 HOH A 105 469 105 HOH HOH . F 4 HOH A 106 470 106 HOH HOH . F 4 HOH A 107 471 107 HOH HOH . F 4 HOH A 108 472 108 HOH HOH . F 4 HOH A 109 473 109 HOH HOH . F 4 HOH A 110 474 110 HOH HOH . F 4 HOH A 111 475 111 HOH HOH . F 4 HOH A 112 476 112 HOH HOH . F 4 HOH A 113 477 113 HOH HOH . F 4 HOH A 114 478 114 HOH HOH . F 4 HOH A 115 479 115 HOH HOH . F 4 HOH A 116 480 116 HOH HOH . F 4 HOH A 117 481 117 HOH HOH . F 4 HOH A 118 482 118 HOH HOH . F 4 HOH A 119 483 119 HOH HOH . F 4 HOH A 120 484 120 HOH HOH . F 4 HOH A 121 485 121 HOH HOH . F 4 HOH A 122 486 122 HOH HOH . F 4 HOH A 123 487 123 HOH HOH . F 4 HOH A 124 488 124 HOH HOH . F 4 HOH A 125 489 125 HOH HOH . F 4 HOH A 126 490 126 HOH HOH . F 4 HOH A 127 491 127 HOH HOH . F 4 HOH A 128 492 128 HOH HOH . F 4 HOH A 129 493 129 HOH HOH . F 4 HOH A 130 494 130 HOH HOH . F 4 HOH A 131 495 131 HOH HOH . F 4 HOH A 132 496 132 HOH HOH . F 4 HOH A 133 497 133 HOH HOH . F 4 HOH A 134 498 134 HOH HOH . F 4 HOH A 135 499 135 HOH HOH . F 4 HOH A 136 500 136 HOH HOH . F 4 HOH A 137 501 137 HOH HOH . F 4 HOH A 138 502 138 HOH HOH . F 4 HOH A 139 503 139 HOH HOH . F 4 HOH A 140 504 140 HOH HOH . F 4 HOH A 141 505 141 HOH HOH . F 4 HOH A 142 506 142 HOH HOH . F 4 HOH A 143 507 143 HOH HOH . F 4 HOH A 144 508 144 HOH HOH . F 4 HOH A 145 509 145 HOH HOH . F 4 HOH A 146 510 146 HOH HOH . F 4 HOH A 147 511 147 HOH HOH . F 4 HOH A 148 512 148 HOH HOH . F 4 HOH A 149 513 149 HOH HOH . F 4 HOH A 150 514 150 HOH HOH . F 4 HOH A 151 515 151 HOH HOH . F 4 HOH A 152 516 152 HOH HOH . F 4 HOH A 153 517 153 HOH HOH . F 4 HOH A 154 518 154 HOH HOH . F 4 HOH A 155 519 155 HOH HOH . F 4 HOH A 156 520 156 HOH HOH . F 4 HOH A 157 521 157 HOH HOH . F 4 HOH A 158 522 158 HOH HOH . F 4 HOH A 159 523 159 HOH HOH . F 4 HOH A 160 524 160 HOH HOH . F 4 HOH A 161 525 161 HOH HOH . F 4 HOH A 162 526 162 HOH HOH . F 4 HOH A 163 527 163 HOH HOH . F 4 HOH A 164 528 164 HOH HOH . F 4 HOH A 165 529 165 HOH HOH . F 4 HOH A 166 530 166 HOH HOH . F 4 HOH A 167 531 167 HOH HOH . F 4 HOH A 168 532 168 HOH HOH . F 4 HOH A 169 533 169 HOH HOH . F 4 HOH A 170 534 170 HOH HOH . F 4 HOH A 171 535 171 HOH HOH . F 4 HOH A 172 536 172 HOH HOH . F 4 HOH A 173 537 173 HOH HOH . F 4 HOH A 174 538 174 HOH HOH . F 4 HOH A 175 539 175 HOH HOH . F 4 HOH A 176 540 176 HOH HOH . F 4 HOH A 177 541 177 HOH HOH . F 4 HOH A 178 542 178 HOH HOH . F 4 HOH A 179 543 179 HOH HOH . F 4 HOH A 180 544 180 HOH HOH . F 4 HOH A 181 545 181 HOH HOH . F 4 HOH A 182 546 182 HOH HOH . F 4 HOH A 183 547 183 HOH HOH . F 4 HOH A 184 548 184 HOH HOH . F 4 HOH A 185 549 185 HOH HOH . F 4 HOH A 186 550 186 HOH HOH . F 4 HOH A 187 551 187 HOH HOH . F 4 HOH A 188 552 188 HOH HOH . F 4 HOH A 189 553 189 HOH HOH . F 4 HOH A 190 554 190 HOH HOH . F 4 HOH A 191 555 191 HOH HOH . F 4 HOH A 192 556 192 HOH HOH . F 4 HOH A 193 557 193 HOH HOH . F 4 HOH A 194 558 194 HOH HOH . F 4 HOH A 195 559 195 HOH HOH . F 4 HOH A 196 560 196 HOH HOH . F 4 HOH A 197 561 197 HOH HOH . F 4 HOH A 198 562 198 HOH HOH . F 4 HOH A 199 563 199 HOH HOH . F 4 HOH A 200 564 200 HOH HOH . F 4 HOH A 201 565 201 HOH HOH . F 4 HOH A 202 566 202 HOH HOH . F 4 HOH A 203 567 203 HOH HOH . F 4 HOH A 204 568 204 HOH HOH . F 4 HOH A 205 569 205 HOH HOH . F 4 HOH A 206 570 206 HOH HOH . F 4 HOH A 207 571 207 HOH HOH . F 4 HOH A 208 572 208 HOH HOH . F 4 HOH A 209 573 209 HOH HOH . F 4 HOH A 210 574 210 HOH HOH . F 4 HOH A 211 575 211 HOH HOH . F 4 HOH A 212 576 212 HOH HOH . F 4 HOH A 213 577 213 HOH HOH . F 4 HOH A 214 578 214 HOH HOH . F 4 HOH A 215 579 215 HOH HOH . F 4 HOH A 216 580 216 HOH HOH . F 4 HOH A 217 581 217 HOH HOH . F 4 HOH A 218 582 218 HOH HOH . F 4 HOH A 219 583 219 HOH HOH . F 4 HOH A 220 584 220 HOH HOH . F 4 HOH A 221 585 221 HOH HOH . F 4 HOH A 222 586 222 HOH HOH . F 4 HOH A 223 587 223 HOH HOH . F 4 HOH A 224 588 224 HOH HOH . F 4 HOH A 225 589 225 HOH HOH . F 4 HOH A 226 590 226 HOH HOH . F 4 HOH A 227 591 227 HOH HOH . F 4 HOH A 228 592 228 HOH HOH . F 4 HOH A 229 593 229 HOH HOH . F 4 HOH A 230 594 230 HOH HOH . F 4 HOH A 231 595 231 HOH HOH . F 4 HOH A 232 596 232 HOH HOH . F 4 HOH A 233 597 233 HOH HOH . F 4 HOH A 234 598 234 HOH HOH . F 4 HOH A 235 599 235 HOH HOH . F 4 HOH A 236 600 236 HOH HOH . F 4 HOH A 237 601 237 HOH HOH . F 4 HOH A 238 602 238 HOH HOH . F 4 HOH A 239 603 239 HOH HOH . F 4 HOH A 240 604 240 HOH HOH . F 4 HOH A 241 605 241 HOH HOH . F 4 HOH A 242 606 242 HOH HOH . F 4 HOH A 243 607 243 HOH HOH . F 4 HOH A 244 608 244 HOH HOH . F 4 HOH A 245 609 245 HOH HOH . F 4 HOH A 246 610 246 HOH HOH . F 4 HOH A 247 611 247 HOH HOH . F 4 HOH A 248 612 248 HOH HOH . F 4 HOH A 249 613 249 HOH HOH . F 4 HOH A 250 614 250 HOH HOH . F 4 HOH A 251 615 251 HOH HOH . F 4 HOH A 252 616 252 HOH HOH . F 4 HOH A 253 617 253 HOH HOH . F 4 HOH A 254 618 254 HOH HOH . F 4 HOH A 255 619 255 HOH HOH . F 4 HOH A 256 620 256 HOH HOH . F 4 HOH A 257 621 257 HOH HOH . F 4 HOH A 258 622 258 HOH HOH . F 4 HOH A 259 623 259 HOH HOH . F 4 HOH A 260 624 260 HOH HOH . F 4 HOH A 261 625 261 HOH HOH . F 4 HOH A 262 626 262 HOH HOH . F 4 HOH A 263 627 263 HOH HOH . F 4 HOH A 264 628 264 HOH HOH . F 4 HOH A 265 629 265 HOH HOH . F 4 HOH A 266 630 266 HOH HOH . F 4 HOH A 267 631 267 HOH HOH . F 4 HOH A 268 632 268 HOH HOH . F 4 HOH A 269 633 269 HOH HOH . F 4 HOH A 270 634 270 HOH HOH . F 4 HOH A 271 635 271 HOH HOH . F 4 HOH A 272 636 272 HOH HOH . F 4 HOH A 273 637 273 HOH HOH . F 4 HOH A 274 638 274 HOH HOH . F 4 HOH A 275 639 275 HOH HOH . F 4 HOH A 276 640 276 HOH HOH . F 4 HOH A 277 641 277 HOH HOH . F 4 HOH A 278 642 278 HOH HOH . F 4 HOH A 279 643 279 HOH HOH . F 4 HOH A 280 644 280 HOH HOH . F 4 HOH A 281 645 281 HOH HOH . F 4 HOH A 282 646 282 HOH HOH . F 4 HOH A 283 647 283 HOH HOH . F 4 HOH A 284 648 284 HOH HOH . F 4 HOH A 285 649 285 HOH HOH . F 4 HOH A 286 650 286 HOH HOH . F 4 HOH A 287 651 287 HOH HOH . F 4 HOH A 288 652 288 HOH HOH . F 4 HOH A 289 653 289 HOH HOH . F 4 HOH A 290 654 290 HOH HOH . F 4 HOH A 291 655 291 HOH HOH . F 4 HOH A 292 656 292 HOH HOH . F 4 HOH A 293 657 293 HOH HOH . F 4 HOH A 294 658 294 HOH HOH . F 4 HOH A 295 659 295 HOH HOH . F 4 HOH A 296 660 296 HOH HOH . F 4 HOH A 297 661 297 HOH HOH . F 4 HOH A 298 662 298 HOH HOH . F 4 HOH A 299 663 299 HOH HOH . F 4 HOH A 300 664 300 HOH HOH . F 4 HOH A 301 665 301 HOH HOH . F 4 HOH A 302 666 302 HOH HOH . F 4 HOH A 303 667 303 HOH HOH . F 4 HOH A 304 668 304 HOH HOH . F 4 HOH A 305 669 305 HOH HOH . F 4 HOH A 306 670 306 HOH HOH . F 4 HOH A 307 671 307 HOH HOH . F 4 HOH A 308 672 308 HOH HOH . F 4 HOH A 309 673 309 HOH HOH . F 4 HOH A 310 674 310 HOH HOH . F 4 HOH A 311 675 311 HOH HOH . F 4 HOH A 312 676 312 HOH HOH . F 4 HOH A 313 677 313 HOH HOH . F 4 HOH A 314 678 314 HOH HOH . F 4 HOH A 315 679 315 HOH HOH . F 4 HOH A 316 680 316 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 3 20.707 23.134 39.11 1 40.82 ? C1 GOL 362 A 1 HETATM 2 O O1 GOL . . . C 3 19.972 24.334 38.995 1 36.89 ? O1 GOL 362 A 1 HETATM 3 C C2 GOL . . . C 3 19.825 22.182 39.858 1 38.53 ? C2 GOL 362 A 1 HETATM 4 O O2 GOL . . . C 3 18.655 22.947 39.98 1 41.95 ? O2 GOL 362 A 1 HETATM 5 C C3 GOL . . . C 3 20.409 21.877 41.239 1 40.85 ? C3 GOL 362 A 1 HETATM 6 O O3 GOL . . . C 3 21.285 20.76 41.207 1 40.35 ? O3 GOL 362 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 269 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 6 #