data_3MQ3 # _model_server_result.job_id rPiAyznJJih42uEv41uHNQ _model_server_result.datetime_utc '2025-03-05 21:05:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mq3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 3MQ3 # _exptl.entry_id 3MQ3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 54.938 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MANGANESE (II) ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3MQ3 _cell.length_a 75.274 _cell.length_b 75.274 _cell.length_c 172.637 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MQ3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 73 A ASP 73 1_555 B MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc2 A OD1 ASP 73 A ASP 73 1_555 C MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc3 A O GLY 74 A GLY 74 1_555 B MN MN . A MN 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc4 A OD1 ASP 347 A ASP 347 1_555 C MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.138 ? metalc ? metalc5 A OD2 ASP 445 A ASP 445 1_555 C MN MN . A MN 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc6 C MN MN . A MN 502 1_555 D O HOH . A HOH 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.95 ? # _chem_comp.formula 'Mn 2' _chem_comp.formula_weight 54.938 _chem_comp.id MN _chem_comp.mon_nstd_flag . _chem_comp.name 'MANGANESE (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3MQ3 _atom_sites.fract_transf_matrix[1][1] 0.013285 _atom_sites.fract_transf_matrix[1][2] 0.00767 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01534 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN A 1 501 501 MN MN . C 2 MN A 1 502 502 MN MN . D 3 HOH A 1 468 1 HOH HOH . D 3 HOH A 2 469 3 HOH HOH . D 3 HOH A 3 470 4 HOH HOH . D 3 HOH A 4 471 5 HOH HOH . D 3 HOH A 5 472 6 HOH HOH . D 3 HOH A 6 473 8 HOH HOH . D 3 HOH A 7 474 9 HOH HOH . D 3 HOH A 8 475 11 HOH HOH . D 3 HOH A 9 476 13 HOH HOH . D 3 HOH A 10 477 15 HOH HOH . D 3 HOH A 11 478 17 HOH HOH . D 3 HOH A 12 479 19 HOH HOH . D 3 HOH A 13 480 20 HOH HOH . D 3 HOH A 14 481 21 HOH HOH . D 3 HOH A 15 482 23 HOH HOH . D 3 HOH A 16 483 26 HOH HOH . D 3 HOH A 17 484 28 HOH HOH . D 3 HOH A 18 485 32 HOH HOH . D 3 HOH A 19 486 36 HOH HOH . D 3 HOH A 20 487 38 HOH HOH . D 3 HOH A 21 488 40 HOH HOH . D 3 HOH A 22 489 489 HOH HOH . D 3 HOH A 23 490 41 HOH HOH . D 3 HOH A 24 491 45 HOH HOH . D 3 HOH A 25 492 46 HOH HOH . D 3 HOH A 26 493 48 HOH HOH . D 3 HOH A 27 494 51 HOH HOH . D 3 HOH A 28 495 52 HOH HOH . D 3 HOH A 29 496 53 HOH HOH . D 3 HOH A 30 497 56 HOH HOH . D 3 HOH A 31 498 58 HOH HOH . D 3 HOH A 32 499 59 HOH HOH . D 3 HOH A 33 500 62 HOH HOH . D 3 HOH A 34 503 66 HOH HOH . D 3 HOH A 35 504 504 HOH HOH . D 3 HOH A 36 505 68 HOH HOH . D 3 HOH A 37 506 72 HOH HOH . D 3 HOH A 38 507 74 HOH HOH . D 3 HOH A 39 508 75 HOH HOH . D 3 HOH A 40 509 77 HOH HOH . D 3 HOH A 41 510 80 HOH HOH . D 3 HOH A 42 511 81 HOH HOH . D 3 HOH A 43 512 84 HOH HOH . D 3 HOH A 44 513 88 HOH HOH . D 3 HOH A 45 514 89 HOH HOH . D 3 HOH A 46 515 92 HOH HOH . D 3 HOH A 47 516 98 HOH HOH . D 3 HOH A 48 517 99 HOH HOH . D 3 HOH A 49 518 108 HOH HOH . D 3 HOH A 50 519 114 HOH HOH . D 3 HOH A 51 520 117 HOH HOH . D 3 HOH A 52 521 120 HOH HOH . D 3 HOH A 53 522 127 HOH HOH . D 3 HOH A 54 523 130 HOH HOH . D 3 HOH A 55 524 131 HOH HOH . D 3 HOH A 56 525 525 HOH HOH . D 3 HOH A 57 526 133 HOH HOH . D 3 HOH A 58 527 138 HOH HOH . D 3 HOH A 59 528 141 HOH HOH . D 3 HOH A 60 529 143 HOH HOH . D 3 HOH A 61 530 144 HOH HOH . D 3 HOH A 62 531 150 HOH HOH . D 3 HOH A 63 532 153 HOH HOH . D 3 HOH A 64 533 156 HOH HOH . D 3 HOH A 65 534 159 HOH HOH . D 3 HOH A 66 535 165 HOH HOH . D 3 HOH A 67 536 168 HOH HOH . D 3 HOH A 68 537 184 HOH HOH . D 3 HOH A 69 538 188 HOH HOH . D 3 HOH A 70 539 197 HOH HOH . D 3 HOH A 71 540 213 HOH HOH . D 3 HOH A 72 541 218 HOH HOH . D 3 HOH A 73 542 230 HOH HOH . D 3 HOH A 74 543 235 HOH HOH . D 3 HOH A 75 544 251 HOH HOH . D 3 HOH A 76 545 259 HOH HOH . D 3 HOH A 77 546 265 HOH HOH . D 3 HOH A 78 547 266 HOH HOH . D 3 HOH A 79 548 267 HOH HOH . D 3 HOH A 80 549 268 HOH HOH . D 3 HOH A 81 550 269 HOH HOH . D 3 HOH A 82 551 270 HOH HOH . D 3 HOH A 83 552 271 HOH HOH . D 3 HOH A 84 553 280 HOH HOH . D 3 HOH A 85 554 554 HOH HOH . D 3 HOH A 86 555 329 HOH HOH . D 3 HOH A 87 556 331 HOH HOH . D 3 HOH A 88 557 391 HOH HOH . D 3 HOH A 89 558 399 HOH HOH . D 3 HOH A 90 559 400 HOH HOH . D 3 HOH A 91 560 401 HOH HOH . D 3 HOH A 92 561 403 HOH HOH . D 3 HOH A 93 562 420 HOH HOH . D 3 HOH A 94 563 460 HOH HOH . D 3 HOH A 95 569 569 HOH HOH . D 3 HOH A 96 593 593 HOH HOH . D 3 HOH A 97 614 614 HOH HOH . D 3 HOH A 98 697 697 HOH HOH . D 3 HOH A 99 723 723 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MN _atom_site.label_atom_id MN _atom_site.label_comp_id MN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 31.245 _atom_site.Cartn_y 18.298 _atom_site.Cartn_z 62.313 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.93 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MN _atom_site.auth_comp_id MN _atom_site.auth_seq_id 502 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 27 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #