data_3MTG # _model_server_result.job_id GsYImi8mXLlLNu6yfcKPVQ _model_server_result.datetime_utc '2024-11-22 21:24:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mtg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3MTG # _exptl.entry_id 3MTG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 663.425 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description NICOTINAMIDE-ADENINE-DINUCLEOTIDE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 115.27 _cell.angle_gamma 90 _cell.entry_id 3MTG _cell.length_a 186.24 _cell.length_b 68.6 _cell.length_c 90.37 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MTG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 38.577546 0 -81.72215 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C21 H27 N7 O14 P2' _chem_comp.formula_weight 663.425 _chem_comp.id NAD _chem_comp.mon_nstd_flag . _chem_comp.name NICOTINAMIDE-ADENINE-DINUCLEOTIDE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAD doub 237 n n PA O2A NAD sing 238 n n PA O5B NAD sing 239 n n PA O3 NAD sing 240 n n O2A HOA2 NAD sing 241 n n O5B C5B NAD sing 242 n n C5B C4B NAD sing 243 n n C5B H51A NAD sing 244 n n C5B H52A NAD sing 245 n n C4B O4B NAD sing 246 n n C4B C3B NAD sing 247 n n C4B H4B NAD sing 248 n n O4B C1B NAD sing 249 n n C3B O3B NAD sing 250 n n C3B C2B NAD sing 251 n n C3B H3B NAD sing 252 n n O3B HO3A NAD sing 253 n n C2B O2B NAD sing 254 n n C2B C1B NAD sing 255 n n C2B H2B NAD sing 256 n n O2B HO2A NAD sing 257 n n C1B N9A NAD sing 258 n n C1B H1B NAD sing 259 n n N9A C8A NAD sing 260 n y N9A C4A NAD sing 261 n y C8A N7A NAD doub 262 n y C8A H8A NAD sing 263 n n N7A C5A NAD sing 264 n y C5A C6A NAD sing 265 n y C5A C4A NAD doub 266 n y C6A N6A NAD sing 267 n n C6A N1A NAD doub 268 n y N6A H61A NAD sing 269 n n N6A H62A NAD sing 270 n n N1A C2A NAD sing 271 n y C2A N3A NAD doub 272 n y C2A H2A NAD sing 273 n n N3A C4A NAD sing 274 n y O3 PN NAD sing 275 n n PN O1N NAD doub 276 n n PN O2N NAD sing 277 n n PN O5D NAD sing 278 n n O5D C5D NAD sing 279 n n C5D C4D NAD sing 280 n n C5D H51N NAD sing 281 n n C5D H52N NAD sing 282 n n C4D O4D NAD sing 283 n n C4D C3D NAD sing 284 n n C4D H4D NAD sing 285 n n O4D C1D NAD sing 286 n n C3D O3D NAD sing 287 n n C3D C2D NAD sing 288 n n C3D H3D NAD sing 289 n n O3D HO3N NAD sing 290 n n C2D O2D NAD sing 291 n n C2D C1D NAD sing 292 n n C2D H2D NAD sing 293 n n O2D HO2N NAD sing 294 n n C1D N1N NAD sing 295 n n C1D H1D NAD sing 296 n n N1N C2N NAD sing 297 n y N1N C6N NAD doub 298 n y C2N C3N NAD doub 299 n y C2N H2N NAD sing 300 n n C3N C7N NAD sing 301 n n C3N C4N NAD sing 302 n y C7N O7N NAD doub 303 n n C7N N7N NAD sing 304 n n N7N H71N NAD sing 305 n n N7N H72N NAD sing 306 n n C4N C5N NAD doub 307 n y C4N H4N NAD sing 308 n n C5N C6N NAD sing 309 n y C5N H5N NAD sing 310 n n C6N H6N NAD sing 311 n n # _atom_sites.entry_id 3MTG _atom_sites.fract_transf_matrix[1][1] 0.005369 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002535 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014577 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012237 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAD A 1 1 1 NAD NAD . D 2 NAD B 1 1 1 NAD NAD . E 3 HOH A 1 3 3 HOH HOH . E 3 HOH A 2 4 4 HOH HOH . E 3 HOH A 3 6 6 HOH HOH . E 3 HOH A 4 7 7 HOH HOH . E 3 HOH A 5 9 9 HOH HOH . E 3 HOH A 6 11 11 HOH HOH . E 3 HOH A 7 12 12 HOH HOH . E 3 HOH A 8 13 13 HOH HOH . E 3 HOH A 9 14 14 HOH HOH . E 3 HOH A 10 20 20 HOH HOH . E 3 HOH A 11 26 26 HOH HOH . E 3 HOH A 12 29 29 HOH HOH . E 3 HOH A 13 32 32 HOH HOH . E 3 HOH A 14 42 42 HOH HOH . E 3 HOH A 15 45 45 HOH HOH . E 3 HOH A 16 46 46 HOH HOH . E 3 HOH A 17 49 49 HOH HOH . E 3 HOH A 18 53 53 HOH HOH . E 3 HOH A 19 57 57 HOH HOH . E 3 HOH A 20 60 60 HOH HOH . E 3 HOH A 21 61 61 HOH HOH . E 3 HOH A 22 62 62 HOH HOH . E 3 HOH A 23 63 63 HOH HOH . E 3 HOH A 24 65 65 HOH HOH . E 3 HOH A 25 72 72 HOH HOH . E 3 HOH A 26 78 78 HOH HOH . E 3 HOH A 27 80 80 HOH HOH . E 3 HOH A 28 84 84 HOH HOH . E 3 HOH A 29 86 86 HOH HOH . E 3 HOH A 30 531 87 HOH HOH . E 3 HOH A 31 532 88 HOH HOH . E 3 HOH A 32 533 89 HOH HOH . E 3 HOH A 33 534 90 HOH HOH . E 3 HOH A 34 535 92 HOH HOH . E 3 HOH A 35 536 93 HOH HOH . E 3 HOH A 36 537 94 HOH HOH . E 3 HOH A 37 538 96 HOH HOH . E 3 HOH A 38 539 97 HOH HOH . E 3 HOH A 39 540 98 HOH HOH . E 3 HOH A 40 541 100 HOH HOH . E 3 HOH A 41 542 103 HOH HOH . E 3 HOH A 42 543 104 HOH HOH . E 3 HOH A 43 544 107 HOH HOH . E 3 HOH A 44 545 110 HOH HOH . E 3 HOH A 45 546 113 HOH HOH . E 3 HOH A 46 547 116 HOH HOH . E 3 HOH A 47 548 117 HOH HOH . E 3 HOH A 48 549 127 HOH HOH . E 3 HOH A 49 550 128 HOH HOH . E 3 HOH A 50 551 131 HOH HOH . E 3 HOH A 51 552 138 HOH HOH . E 3 HOH A 52 553 139 HOH HOH . E 3 HOH A 53 554 141 HOH HOH . E 3 HOH A 54 555 144 HOH HOH . E 3 HOH A 55 556 147 HOH HOH . F 3 HOH B 1 2 2 HOH HOH . F 3 HOH B 2 5 5 HOH HOH . F 3 HOH B 3 10 10 HOH HOH . F 3 HOH B 4 15 15 HOH HOH . F 3 HOH B 5 16 16 HOH HOH . F 3 HOH B 6 17 17 HOH HOH . F 3 HOH B 7 18 18 HOH HOH . F 3 HOH B 8 21 21 HOH HOH . F 3 HOH B 9 24 24 HOH HOH . F 3 HOH B 10 27 27 HOH HOH . F 3 HOH B 11 28 28 HOH HOH . F 3 HOH B 12 30 30 HOH HOH . F 3 HOH B 13 33 33 HOH HOH . F 3 HOH B 14 34 34 HOH HOH . F 3 HOH B 15 35 35 HOH HOH . F 3 HOH B 16 36 36 HOH HOH . F 3 HOH B 17 37 37 HOH HOH . F 3 HOH B 18 39 39 HOH HOH . F 3 HOH B 19 40 40 HOH HOH . F 3 HOH B 20 41 41 HOH HOH . F 3 HOH B 21 43 43 HOH HOH . F 3 HOH B 22 47 47 HOH HOH . F 3 HOH B 23 48 48 HOH HOH . F 3 HOH B 24 51 51 HOH HOH . F 3 HOH B 25 52 52 HOH HOH . F 3 HOH B 26 54 54 HOH HOH . F 3 HOH B 27 56 56 HOH HOH . F 3 HOH B 28 59 59 HOH HOH . F 3 HOH B 29 67 67 HOH HOH . F 3 HOH B 30 68 68 HOH HOH . F 3 HOH B 31 69 69 HOH HOH . F 3 HOH B 32 70 70 HOH HOH . F 3 HOH B 33 74 74 HOH HOH . F 3 HOH B 34 75 75 HOH HOH . F 3 HOH B 35 76 76 HOH HOH . F 3 HOH B 36 83 83 HOH HOH . F 3 HOH B 37 85 85 HOH HOH . F 3 HOH B 38 531 1 HOH HOH . F 3 HOH B 39 532 102 HOH HOH . F 3 HOH B 40 533 106 HOH HOH . F 3 HOH B 41 534 108 HOH HOH . F 3 HOH B 42 535 111 HOH HOH . F 3 HOH B 43 536 115 HOH HOH . F 3 HOH B 44 537 118 HOH HOH . F 3 HOH B 45 538 119 HOH HOH . F 3 HOH B 46 539 120 HOH HOH . F 3 HOH B 47 540 121 HOH HOH . F 3 HOH B 48 541 124 HOH HOH . F 3 HOH B 49 542 125 HOH HOH . F 3 HOH B 50 543 126 HOH HOH . F 3 HOH B 51 544 129 HOH HOH . F 3 HOH B 52 545 133 HOH HOH . F 3 HOH B 53 546 134 HOH HOH . F 3 HOH B 54 547 135 HOH HOH . F 3 HOH B 55 548 136 HOH HOH . F 3 HOH B 56 549 142 HOH HOH . F 3 HOH B 57 550 143 HOH HOH . F 3 HOH B 58 551 145 HOH HOH . F 3 HOH B 59 552 146 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAD . . . C 2 37.383 43.117 -28.915 1 54.19 ? PA NAD 1 A 1 HETATM 2 O O1A NAD . . . C 2 38.754 43.647 -28.758 1 58.84 ? O1A NAD 1 A 1 HETATM 3 O O2A NAD . . . C 2 37.303 42.081 -29.974 1 57.24 ? O2A NAD 1 A 1 HETATM 4 O O5B NAD . . . C 2 36.428 44.341 -29.245 1 48.28 ? O5B NAD 1 A 1 HETATM 5 C C5B NAD . . . C 2 36.622 45.576 -28.643 1 48.4 ? C5B NAD 1 A 1 HETATM 6 C C4B NAD . . . C 2 36.24 46.576 -29.699 1 50.15 ? C4B NAD 1 A 1 HETATM 7 O O4B NAD . . . C 2 35.927 47.803 -29.088 1 48.74 ? O4B NAD 1 A 1 HETATM 8 C C3B NAD . . . C 2 37.419 46.813 -30.638 1 55.69 ? C3B NAD 1 A 1 HETATM 9 O O3B NAD . . . C 2 37.045 46.444 -31.956 1 58.18 ? O3B NAD 1 A 1 HETATM 10 C C2B NAD . . . C 2 37.68 48.316 -30.515 1 54.34 ? C2B NAD 1 A 1 HETATM 11 O O2B NAD . . . C 2 37.982 48.931 -31.752 1 52.58 ? O2B NAD 1 A 1 HETATM 12 C C1B NAD . . . C 2 36.373 48.844 -29.938 1 51.84 ? C1B NAD 1 A 1 HETATM 13 N N9A NAD . . . C 2 36.546 50.099 -29.182 1 52.62 ? N9A NAD 1 A 1 HETATM 14 C C8A NAD . . . C 2 37.528 50.365 -28.241 1 53.73 ? C8A NAD 1 A 1 HETATM 15 N N7A NAD . . . C 2 37.319 51.616 -27.753 1 52.37 ? N7A NAD 1 A 1 HETATM 16 C C5A NAD . . . C 2 36.223 52.138 -28.362 1 48.94 ? C5A NAD 1 A 1 HETATM 17 C C6A NAD . . . C 2 35.564 53.345 -28.202 1 49.29 ? C6A NAD 1 A 1 HETATM 18 N N6A NAD . . . C 2 35.764 53.991 -27.061 1 53.72 ? N6A NAD 1 A 1 HETATM 19 N N1A NAD . . . C 2 34.426 53.62 -28.946 1 48.48 ? N1A NAD 1 A 1 HETATM 20 C C2A NAD . . . C 2 33.957 52.687 -29.862 1 47.08 ? C2A NAD 1 A 1 HETATM 21 N N3A NAD . . . C 2 34.617 51.476 -29.989 1 47.61 ? N3A NAD 1 A 1 HETATM 22 C C4A NAD . . . C 2 35.71 51.19 -29.239 1 49 ? C4A NAD 1 A 1 HETATM 23 O O3 NAD . . . C 2 36.907 42.48 -27.525 1 54.05 ? O3 NAD 1 A 1 HETATM 24 P PN NAD . . . C 2 35.471 41.817 -27.28 1 55.93 ? PN NAD 1 A 1 HETATM 25 O O1N NAD . . . C 2 35.598 40.337 -27.279 1 54.05 ? O1N NAD 1 A 1 HETATM 26 O O2N NAD . . . C 2 34.472 42.54 -28.112 1 59.03 ? O2N NAD 1 A 1 HETATM 27 O O5D NAD . . . C 2 35.196 42.241 -25.752 1 60.95 ? O5D NAD 1 A 1 HETATM 28 C C5D NAD . . . C 2 35.123 43.6 -25.351 1 63.49 ? C5D NAD 1 A 1 HETATM 29 C C4D NAD . . . C 2 35.287 43.688 -23.831 1 63.77 ? C4D NAD 1 A 1 HETATM 30 O O4D NAD . . . C 2 34.265 42.904 -23.256 1 62.98 ? O4D NAD 1 A 1 HETATM 31 C C3D NAD . . . C 2 36.608 43.082 -23.372 1 64.79 ? C3D NAD 1 A 1 HETATM 32 O O3D NAD . . . C 2 37.076 43.799 -22.248 1 67.57 ? O3D NAD 1 A 1 HETATM 33 C C2D NAD . . . C 2 36.226 41.678 -22.955 1 62.52 ? C2D NAD 1 A 1 HETATM 34 O O2D NAD . . . C 2 37.034 41.169 -21.918 1 61.95 ? O2D NAD 1 A 1 HETATM 35 C C1D NAD . . . C 2 34.808 41.872 -22.466 1 64.05 ? C1D NAD 1 A 1 HETATM 36 N N1N NAD . . . C 2 34.022 40.619 -22.514 1 65.06 ? N1N NAD 1 A 1 HETATM 37 C C2N NAD . . . C 2 32.659 40.645 -22.696 1 63.19 ? C2N NAD 1 A 1 HETATM 38 C C3N NAD . . . C 2 31.943 39.443 -22.705 1 63.08 ? C3N NAD 1 A 1 HETATM 39 C C7N NAD . . . C 2 30.453 39.391 -22.825 1 58.59 ? C7N NAD 1 A 1 HETATM 40 O O7N NAD . . . C 2 29.844 38.14 -22.628 1 58.21 ? O7N NAD 1 A 1 HETATM 41 N N7N NAD . . . C 2 29.747 40.479 -23.128 1 55.92 ? N7N NAD 1 A 1 HETATM 42 C C4N NAD . . . C 2 32.609 38.233 -22.514 1 65.39 ? C4N NAD 1 A 1 HETATM 43 C C5N NAD . . . C 2 33.981 38.223 -22.31 1 67.29 ? C5N NAD 1 A 1 HETATM 44 C C6N NAD . . . C 2 34.672 39.429 -22.294 1 66.64 ? C6N NAD 1 A 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 44 #