data_3MU3 # _model_server_result.job_id DYxo6gWAvyJ6p69-YjUwgw _model_server_result.datetime_utc '2024-11-05 01:52:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mu3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":1}' # _entry.id 3MU3 # _exptl.entry_id 3MU3 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MU3 _cell.length_a 39.465 _cell.length_b 78.15 _cell.length_c 101.236 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MU3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 12 A CYS 28 1_555 A SG CYS 37 A CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 24 A CYS 40 1_555 A SG CYS 133 A CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? disulf ? disulf3 A SG CYS 81 A CYS 97 1_555 A SG CYS 91 A CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.014 ? disulf ? disulf4 B SG CYS 12 B CYS 28 1_555 B SG CYS 37 B CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf5 B SG CYS 24 B CYS 40 1_555 B SG CYS 133 B CYS 149 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? disulf ? disulf6 B SG CYS 81 B CYS 97 1_555 B SG CYS 91 B CYS 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? covale ? covale1 C C1 LP4 . A LP4 300 1_555 D O6 LP5 . A LP5 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale2 F C1 LP4 . B LP4 300 1_555 G O6 LP5 . B LP5 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3MU3 _atom_sites.fract_transf_matrix[1][1] 0.025339 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012796 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009878 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 LP4 A 1 300 300 LP4 LP4 . D 3 LP5 A 1 301 301 LP5 LP5 . E 4 GOL A 1 3 3 GOL GOL . F 2 LP4 B 1 300 300 LP4 LP4 . G 3 LP5 B 1 301 301 LP5 LP5 . H 4 GOL B 1 1 1 GOL GOL . I 4 GOL B 1 2 2 GOL GOL . J 5 HOH A 1 2 2 HOH HOH . J 5 HOH A 2 4 4 HOH HOH . J 5 HOH A 3 5 5 HOH HOH . J 5 HOH A 4 7 7 HOH HOH . J 5 HOH A 5 8 8 HOH HOH . J 5 HOH A 6 11 11 HOH HOH . J 5 HOH A 7 12 12 HOH HOH . J 5 HOH A 8 13 13 HOH HOH . J 5 HOH A 9 15 15 HOH HOH . J 5 HOH A 10 168 17 HOH HOH . J 5 HOH A 11 169 18 HOH HOH . J 5 HOH A 12 170 19 HOH HOH . J 5 HOH A 13 171 21 HOH HOH . J 5 HOH A 14 172 24 HOH HOH . J 5 HOH A 15 173 26 HOH HOH . J 5 HOH A 16 174 27 HOH HOH . J 5 HOH A 17 175 32 HOH HOH . J 5 HOH A 18 176 33 HOH HOH . J 5 HOH A 19 177 34 HOH HOH . J 5 HOH A 20 178 35 HOH HOH . J 5 HOH A 21 179 36 HOH HOH . J 5 HOH A 22 180 37 HOH HOH . J 5 HOH A 23 181 39 HOH HOH . J 5 HOH A 24 182 40 HOH HOH . J 5 HOH A 25 183 43 HOH HOH . J 5 HOH A 26 184 45 HOH HOH . J 5 HOH A 27 185 49 HOH HOH . J 5 HOH A 28 186 53 HOH HOH . J 5 HOH A 29 187 54 HOH HOH . J 5 HOH A 30 188 55 HOH HOH . J 5 HOH A 31 189 64 HOH HOH . J 5 HOH A 32 190 69 HOH HOH . J 5 HOH A 33 191 75 HOH HOH . J 5 HOH A 34 192 76 HOH HOH . J 5 HOH A 35 193 78 HOH HOH . J 5 HOH A 36 194 80 HOH HOH . J 5 HOH A 37 195 81 HOH HOH . J 5 HOH A 38 196 83 HOH HOH . J 5 HOH A 39 197 89 HOH HOH . J 5 HOH A 40 198 92 HOH HOH . J 5 HOH A 41 199 97 HOH HOH . J 5 HOH A 42 200 103 HOH HOH . J 5 HOH A 43 201 104 HOH HOH . J 5 HOH A 44 202 111 HOH HOH . J 5 HOH A 45 203 117 HOH HOH . J 5 HOH A 46 204 120 HOH HOH . J 5 HOH A 47 209 118 HOH HOH . K 5 HOH B 1 3 3 HOH HOH . K 5 HOH B 2 6 6 HOH HOH . K 5 HOH B 3 9 9 HOH HOH . K 5 HOH B 4 10 10 HOH HOH . K 5 HOH B 5 14 14 HOH HOH . K 5 HOH B 6 16 16 HOH HOH . K 5 HOH B 7 168 1 HOH HOH . K 5 HOH B 8 169 20 HOH HOH . K 5 HOH B 9 170 22 HOH HOH . K 5 HOH B 10 171 23 HOH HOH . K 5 HOH B 11 172 25 HOH HOH . K 5 HOH B 12 173 28 HOH HOH . K 5 HOH B 13 174 29 HOH HOH . K 5 HOH B 14 175 31 HOH HOH . K 5 HOH B 15 176 38 HOH HOH . K 5 HOH B 16 177 41 HOH HOH . K 5 HOH B 17 178 42 HOH HOH . K 5 HOH B 18 179 46 HOH HOH . K 5 HOH B 19 180 47 HOH HOH . K 5 HOH B 20 181 48 HOH HOH . K 5 HOH B 21 182 50 HOH HOH . K 5 HOH B 22 183 51 HOH HOH . K 5 HOH B 23 184 56 HOH HOH . K 5 HOH B 24 185 57 HOH HOH . K 5 HOH B 25 186 59 HOH HOH . K 5 HOH B 26 187 62 HOH HOH . K 5 HOH B 27 188 63 HOH HOH . K 5 HOH B 28 189 66 HOH HOH . K 5 HOH B 29 190 68 HOH HOH . K 5 HOH B 30 191 71 HOH HOH . K 5 HOH B 31 192 72 HOH HOH . K 5 HOH B 32 193 73 HOH HOH . K 5 HOH B 33 194 74 HOH HOH . K 5 HOH B 34 195 82 HOH HOH . K 5 HOH B 35 196 85 HOH HOH . K 5 HOH B 36 197 90 HOH HOH . K 5 HOH B 37 198 94 HOH HOH . K 5 HOH B 38 199 96 HOH HOH . K 5 HOH B 39 200 100 HOH HOH . K 5 HOH B 40 201 101 HOH HOH . K 5 HOH B 41 202 102 HOH HOH . K 5 HOH B 42 203 105 HOH HOH . K 5 HOH B 43 204 108 HOH HOH . K 5 HOH B 44 205 109 HOH HOH . K 5 HOH B 45 206 110 HOH HOH . K 5 HOH B 46 207 112 HOH HOH . K 5 HOH B 47 208 113 HOH HOH . K 5 HOH B 48 210 119 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . H 4 22.134 2.216 -18.543 1 39.71 ? C1 GOL 1 B 1 HETATM 2 O O1 GOL . . . H 4 23.183 2.218 -19.473 1 40.03 ? O1 GOL 1 B 1 HETATM 3 C C2 GOL . . . H 4 22.63 2.165 -17.136 1 42.59 ? C2 GOL 1 B 1 HETATM 4 O O2 GOL . . . H 4 21.59 2.585 -16.253 1 31.6 ? O2 GOL 1 B 1 HETATM 5 C C3 GOL . . . H 4 23.777 3.142 -17.149 1 46.66 ? C3 GOL 1 B 1 HETATM 6 O O3 GOL . . . H 4 23.25 4.363 -17.629 1 51.95 ? O3 GOL 1 B 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #