data_3MUF # _model_server_result.job_id bxDcjveM3N-q3Tf7lwyp9A _model_server_result.datetime_utc '2025-02-27 23:19:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3muf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 3MUF # _exptl.entry_id 3MUF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 254.131 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description SHIKIMATE-3-PHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3MUF _cell.length_a 98.816 _cell.length_b 98.816 _cell.length_c 42.129 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MUF _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C7 H11 O8 P' _chem_comp.formula_weight 254.131 _chem_comp.id S3P _chem_comp.mon_nstd_flag . _chem_comp.name SHIKIMATE-3-PHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 S3P doub 308 n n C1 C6 S3P sing 309 n n C1 C7 S3P sing 310 n n C2 C3 S3P sing 311 n n C2 H2 S3P sing 312 n n C3 C4 S3P sing 313 n n C3 O1 S3P sing 314 n n C3 H3 S3P sing 315 n n C4 C5 S3P sing 316 n n C4 O2 S3P sing 317 n n C4 H4 S3P sing 318 n n C5 C6 S3P sing 319 n n C5 O3 S3P sing 320 n n C5 H5 S3P sing 321 n n C6 H61 S3P sing 322 n n C6 H62 S3P sing 323 n n C7 O4 S3P sing 324 n n C7 O5 S3P doub 325 n n O1 P1 S3P sing 326 n n O2 HO2 S3P sing 327 n n O3 HO3 S3P sing 328 n n O4 HO4 S3P sing 329 n n P1 O6 S3P doub 330 n n P1 O7 S3P sing 331 n n P1 O8 S3P sing 332 n n O7 HO7 S3P sing 333 n n O8 HO8 S3P sing 334 n n # _atom_sites.entry_id 3MUF _atom_sites.fract_transf_matrix[1][1] 0.01012 _atom_sites.fract_transf_matrix[1][2] 0.005843 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011685 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023737 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ADP A 1 202 202 ADP ADP . C 3 S3P A 1 201 201 S3P S3P . D 4 HOH A 1 163 1 HOH HOH . D 4 HOH A 2 164 2 HOH HOH . D 4 HOH A 3 165 3 HOH HOH . D 4 HOH A 4 166 4 HOH HOH . D 4 HOH A 5 167 5 HOH HOH . D 4 HOH A 6 168 6 HOH HOH . D 4 HOH A 7 169 7 HOH HOH . D 4 HOH A 8 170 8 HOH HOH . D 4 HOH A 9 171 9 HOH HOH . D 4 HOH A 10 172 10 HOH HOH . D 4 HOH A 11 173 11 HOH HOH . D 4 HOH A 12 174 12 HOH HOH . D 4 HOH A 13 175 13 HOH HOH . D 4 HOH A 14 176 14 HOH HOH . D 4 HOH A 15 177 15 HOH HOH . D 4 HOH A 16 178 16 HOH HOH . D 4 HOH A 17 179 17 HOH HOH . D 4 HOH A 18 180 18 HOH HOH . D 4 HOH A 19 181 19 HOH HOH . D 4 HOH A 20 182 20 HOH HOH . D 4 HOH A 21 183 21 HOH HOH . D 4 HOH A 22 184 22 HOH HOH . D 4 HOH A 23 185 23 HOH HOH . D 4 HOH A 24 186 24 HOH HOH . D 4 HOH A 25 187 25 HOH HOH . D 4 HOH A 26 188 26 HOH HOH . D 4 HOH A 27 189 27 HOH HOH . D 4 HOH A 28 190 28 HOH HOH . D 4 HOH A 29 191 29 HOH HOH . D 4 HOH A 30 192 30 HOH HOH . D 4 HOH A 31 193 32 HOH HOH . D 4 HOH A 32 194 34 HOH HOH . D 4 HOH A 33 195 36 HOH HOH . D 4 HOH A 34 196 37 HOH HOH . D 4 HOH A 35 197 39 HOH HOH . D 4 HOH A 36 198 42 HOH HOH . D 4 HOH A 37 199 44 HOH HOH . D 4 HOH A 38 200 45 HOH HOH . D 4 HOH A 39 203 47 HOH HOH . D 4 HOH A 40 204 50 HOH HOH . D 4 HOH A 41 205 51 HOH HOH . D 4 HOH A 42 206 52 HOH HOH . D 4 HOH A 43 207 54 HOH HOH . D 4 HOH A 44 208 55 HOH HOH . D 4 HOH A 45 209 57 HOH HOH . D 4 HOH A 46 210 58 HOH HOH . D 4 HOH A 47 211 59 HOH HOH . D 4 HOH A 48 212 60 HOH HOH . D 4 HOH A 49 213 61 HOH HOH . D 4 HOH A 50 214 62 HOH HOH . D 4 HOH A 51 215 63 HOH HOH . D 4 HOH A 52 216 64 HOH HOH . D 4 HOH A 53 217 65 HOH HOH . D 4 HOH A 54 218 66 HOH HOH . D 4 HOH A 55 219 68 HOH HOH . D 4 HOH A 56 220 70 HOH HOH . D 4 HOH A 57 221 72 HOH HOH . D 4 HOH A 58 222 74 HOH HOH . D 4 HOH A 59 223 75 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 S3P . . . C 3 27.275 33.415 0.54 1 45.85 ? C1 S3P 201 A 1 HETATM 2 C C2 S3P . . . C 3 27.707 32.475 -0.421 1 45.51 ? C2 S3P 201 A 1 HETATM 3 C C3 S3P . . . C 3 26.764 31.829 -1.463 1 46.63 ? C3 S3P 201 A 1 HETATM 4 C C4 S3P . . . C 3 25.313 32.036 -0.976 1 45.47 ? C4 S3P 201 A 1 HETATM 5 C C5 S3P . . . C 3 25.018 33.519 -0.688 1 46.36 ? C5 S3P 201 A 1 HETATM 6 C C6 S3P . . . C 3 25.835 33.978 0.555 1 42.91 ? C6 S3P 201 A 1 HETATM 7 C C7 S3P . . . C 3 28.252 33.946 1.598 1 47.99 ? C7 S3P 201 A 1 HETATM 8 O O1 S3P . . . C 3 27.004 30.381 -1.552 1 51.6 ? O1 S3P 201 A 1 HETATM 9 O O2 S3P . . . C 3 25.126 31.294 0.262 1 45.69 ? O2 S3P 201 A 1 HETATM 10 O O3 S3P . . . C 3 25.283 34.365 -1.862 1 44.66 ? O3 S3P 201 A 1 HETATM 11 O O4 S3P . . . C 3 27.789 34.791 2.403 1 47.16 ? O4 S3P 201 A 1 HETATM 12 O O5 S3P . . . C 3 29.447 33.54 1.602 1 50.48 ? O5 S3P 201 A 1 HETATM 13 P P1 S3P . . . C 3 27.984 29.592 -2.675 1 58.16 ? P1 S3P 201 A 1 HETATM 14 O O6 S3P . . . C 3 27.291 28.47 -3.351 1 58.17 ? O6 S3P 201 A 1 HETATM 15 O O7 S3P . . . C 3 28.414 30.61 -3.902 1 51.28 ? O7 S3P 201 A 1 HETATM 16 O O8 S3P . . . C 3 29.284 29.194 -1.688 1 47.21 ? O8 S3P 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 305 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 16 #