data_3MVE # _model_server_result.job_id u6h163x-gFRorIiDj-jlKQ _model_server_result.datetime_utc '2024-11-24 11:05:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mve # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":423}' # _entry.id 3MVE # _exptl.entry_id 3MVE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 106.62 _cell.angle_gamma 90 _cell.entry_id 3MVE _cell.length_a 60.834 _cell.length_b 88.201 _cell.length_c 79.629 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MVE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 P N N ? 3 Q N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3MVE _atom_sites.fract_transf_matrix[1][1] 0.016438 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004906 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011338 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013106 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 A 1 416 2 SO4 SO4 . D 3 EDO A 1 417 1 EDO EDO . E 3 EDO A 1 418 2 EDO EDO . F 3 EDO A 1 419 3 EDO EDO . G 3 EDO A 1 420 4 EDO EDO . H 3 EDO A 1 421 5 EDO EDO . I 3 EDO A 1 422 6 EDO EDO . J 3 EDO A 1 423 7 EDO EDO . K 3 EDO A 1 424 9 EDO EDO . L 2 SO4 B 1 416 1 SO4 SO4 . M 2 SO4 B 1 417 3 SO4 SO4 . N 2 SO4 B 1 418 4 SO4 SO4 . O 2 SO4 B 1 419 5 SO4 SO4 . P 3 EDO B 1 420 8 EDO EDO . Q 3 EDO B 1 421 10 EDO EDO . R 4 HOH A 1 425 1 HOH HOH . R 4 HOH A 2 426 2 HOH HOH . R 4 HOH A 3 427 3 HOH HOH . R 4 HOH A 4 428 4 HOH HOH . R 4 HOH A 5 429 5 HOH HOH . R 4 HOH A 6 430 6 HOH HOH . R 4 HOH A 7 431 7 HOH HOH . R 4 HOH A 8 432 8 HOH HOH . R 4 HOH A 9 433 9 HOH HOH . R 4 HOH A 10 434 10 HOH HOH . R 4 HOH A 11 435 11 HOH HOH . R 4 HOH A 12 436 12 HOH HOH . R 4 HOH A 13 437 29 HOH HOH . R 4 HOH A 14 438 30 HOH HOH . R 4 HOH A 15 439 31 HOH HOH . R 4 HOH A 16 440 32 HOH HOH . R 4 HOH A 17 441 33 HOH HOH . R 4 HOH A 18 442 34 HOH HOH . R 4 HOH A 19 443 35 HOH HOH . R 4 HOH A 20 444 36 HOH HOH . R 4 HOH A 21 445 37 HOH HOH . R 4 HOH A 22 446 38 HOH HOH . R 4 HOH A 23 447 39 HOH HOH . R 4 HOH A 24 448 40 HOH HOH . R 4 HOH A 25 449 41 HOH HOH . R 4 HOH A 26 450 42 HOH HOH . R 4 HOH A 27 451 43 HOH HOH . R 4 HOH A 28 452 44 HOH HOH . R 4 HOH A 29 453 45 HOH HOH . R 4 HOH A 30 454 46 HOH HOH . R 4 HOH A 31 455 47 HOH HOH . R 4 HOH A 32 456 48 HOH HOH . R 4 HOH A 33 457 49 HOH HOH . R 4 HOH A 34 458 50 HOH HOH . R 4 HOH A 35 459 51 HOH HOH . R 4 HOH A 36 460 52 HOH HOH . R 4 HOH A 37 461 53 HOH HOH . R 4 HOH A 38 462 54 HOH HOH . R 4 HOH A 39 463 55 HOH HOH . R 4 HOH A 40 464 56 HOH HOH . R 4 HOH A 41 465 57 HOH HOH . R 4 HOH A 42 466 58 HOH HOH . R 4 HOH A 43 467 59 HOH HOH . R 4 HOH A 44 468 60 HOH HOH . R 4 HOH A 45 469 61 HOH HOH . R 4 HOH A 46 470 62 HOH HOH . R 4 HOH A 47 471 63 HOH HOH . R 4 HOH A 48 472 64 HOH HOH . R 4 HOH A 49 473 65 HOH HOH . R 4 HOH A 50 474 66 HOH HOH . R 4 HOH A 51 475 120 HOH HOH . R 4 HOH A 52 476 121 HOH HOH . R 4 HOH A 53 477 122 HOH HOH . R 4 HOH A 54 478 123 HOH HOH . R 4 HOH A 55 479 124 HOH HOH . R 4 HOH A 56 480 125 HOH HOH . R 4 HOH A 57 481 126 HOH HOH . R 4 HOH A 58 482 127 HOH HOH . R 4 HOH A 59 483 128 HOH HOH . R 4 HOH A 60 484 129 HOH HOH . R 4 HOH A 61 485 130 HOH HOH . R 4 HOH A 62 486 131 HOH HOH . R 4 HOH A 63 487 132 HOH HOH . R 4 HOH A 64 488 133 HOH HOH . R 4 HOH A 65 489 134 HOH HOH . R 4 HOH A 66 490 135 HOH HOH . R 4 HOH A 67 491 136 HOH HOH . R 4 HOH A 68 492 137 HOH HOH . R 4 HOH A 69 493 156 HOH HOH . R 4 HOH A 70 494 157 HOH HOH . R 4 HOH A 71 495 158 HOH HOH . R 4 HOH A 72 496 159 HOH HOH . R 4 HOH A 73 497 161 HOH HOH . R 4 HOH A 74 498 162 HOH HOH . R 4 HOH A 75 499 163 HOH HOH . R 4 HOH A 76 500 172 HOH HOH . R 4 HOH A 77 501 173 HOH HOH . R 4 HOH A 78 502 174 HOH HOH . R 4 HOH A 79 503 175 HOH HOH . R 4 HOH A 80 504 176 HOH HOH . R 4 HOH A 81 505 177 HOH HOH . R 4 HOH A 82 506 178 HOH HOH . R 4 HOH A 83 507 179 HOH HOH . R 4 HOH A 84 508 182 HOH HOH . R 4 HOH A 85 509 183 HOH HOH . R 4 HOH A 86 510 187 HOH HOH . R 4 HOH A 87 511 188 HOH HOH . R 4 HOH A 88 512 189 HOH HOH . R 4 HOH A 89 513 190 HOH HOH . R 4 HOH A 90 514 191 HOH HOH . R 4 HOH A 91 515 192 HOH HOH . R 4 HOH A 92 516 193 HOH HOH . R 4 HOH A 93 517 195 HOH HOH . R 4 HOH A 94 518 196 HOH HOH . R 4 HOH A 95 519 197 HOH HOH . R 4 HOH A 96 520 198 HOH HOH . R 4 HOH A 97 521 201 HOH HOH . R 4 HOH A 98 522 202 HOH HOH . R 4 HOH A 99 523 207 HOH HOH . R 4 HOH A 100 524 208 HOH HOH . R 4 HOH A 101 525 209 HOH HOH . R 4 HOH A 102 526 210 HOH HOH . R 4 HOH A 103 527 211 HOH HOH . R 4 HOH A 104 528 212 HOH HOH . R 4 HOH A 105 529 214 HOH HOH . R 4 HOH A 106 530 215 HOH HOH . R 4 HOH A 107 531 216 HOH HOH . R 4 HOH A 108 532 217 HOH HOH . R 4 HOH A 109 533 219 HOH HOH . R 4 HOH A 110 534 220 HOH HOH . R 4 HOH A 111 535 222 HOH HOH . R 4 HOH A 112 536 223 HOH HOH . R 4 HOH A 113 537 224 HOH HOH . R 4 HOH A 114 538 225 HOH HOH . R 4 HOH A 115 539 226 HOH HOH . R 4 HOH A 116 540 227 HOH HOH . R 4 HOH A 117 541 230 HOH HOH . R 4 HOH A 118 542 244 HOH HOH . R 4 HOH A 119 543 248 HOH HOH . R 4 HOH A 120 544 249 HOH HOH . R 4 HOH A 121 545 250 HOH HOH . R 4 HOH A 122 546 251 HOH HOH . R 4 HOH A 123 547 252 HOH HOH . R 4 HOH A 124 548 253 HOH HOH . R 4 HOH A 125 549 254 HOH HOH . R 4 HOH A 126 550 255 HOH HOH . R 4 HOH A 127 551 256 HOH HOH . R 4 HOH A 128 552 258 HOH HOH . R 4 HOH A 129 553 260 HOH HOH . R 4 HOH A 130 554 261 HOH HOH . R 4 HOH A 131 555 263 HOH HOH . R 4 HOH A 132 556 264 HOH HOH . R 4 HOH A 133 557 265 HOH HOH . R 4 HOH A 134 558 266 HOH HOH . R 4 HOH A 135 559 267 HOH HOH . R 4 HOH A 136 560 268 HOH HOH . R 4 HOH A 137 561 269 HOH HOH . R 4 HOH A 138 562 262 HOH HOH . R 4 HOH A 139 564 276 HOH HOH . R 4 HOH A 140 565 277 HOH HOH . R 4 HOH A 141 566 278 HOH HOH . R 4 HOH A 142 567 280 HOH HOH . R 4 HOH A 143 568 281 HOH HOH . R 4 HOH A 144 569 283 HOH HOH . R 4 HOH A 145 571 290 HOH HOH . R 4 HOH A 146 572 291 HOH HOH . R 4 HOH A 147 573 294 HOH HOH . R 4 HOH A 148 574 301 HOH HOH . R 4 HOH A 149 575 302 HOH HOH . R 4 HOH A 150 576 303 HOH HOH . S 4 HOH B 1 422 13 HOH HOH . S 4 HOH B 2 423 14 HOH HOH . S 4 HOH B 3 424 15 HOH HOH . S 4 HOH B 4 425 16 HOH HOH . S 4 HOH B 5 426 17 HOH HOH . S 4 HOH B 6 427 18 HOH HOH . S 4 HOH B 7 428 19 HOH HOH . S 4 HOH B 8 429 20 HOH HOH . S 4 HOH B 9 430 21 HOH HOH . S 4 HOH B 10 431 22 HOH HOH . S 4 HOH B 11 432 23 HOH HOH . S 4 HOH B 12 433 24 HOH HOH . S 4 HOH B 13 434 25 HOH HOH . S 4 HOH B 14 435 26 HOH HOH . S 4 HOH B 15 436 27 HOH HOH . S 4 HOH B 16 437 28 HOH HOH . S 4 HOH B 17 438 67 HOH HOH . S 4 HOH B 18 439 68 HOH HOH . S 4 HOH B 19 440 69 HOH HOH . S 4 HOH B 20 441 70 HOH HOH . S 4 HOH B 21 442 71 HOH HOH . S 4 HOH B 22 443 72 HOH HOH . S 4 HOH B 23 444 73 HOH HOH . S 4 HOH B 24 445 74 HOH HOH . S 4 HOH B 25 446 75 HOH HOH . S 4 HOH B 26 447 76 HOH HOH . S 4 HOH B 27 448 77 HOH HOH . S 4 HOH B 28 449 78 HOH HOH . S 4 HOH B 29 450 79 HOH HOH . S 4 HOH B 30 451 80 HOH HOH . S 4 HOH B 31 452 81 HOH HOH . S 4 HOH B 32 453 82 HOH HOH . S 4 HOH B 33 454 83 HOH HOH . S 4 HOH B 34 455 84 HOH HOH . S 4 HOH B 35 456 85 HOH HOH . S 4 HOH B 36 457 86 HOH HOH . S 4 HOH B 37 458 87 HOH HOH . S 4 HOH B 38 459 88 HOH HOH . S 4 HOH B 39 460 89 HOH HOH . S 4 HOH B 40 461 90 HOH HOH . S 4 HOH B 41 462 91 HOH HOH . S 4 HOH B 42 463 92 HOH HOH . S 4 HOH B 43 464 93 HOH HOH . S 4 HOH B 44 465 94 HOH HOH . S 4 HOH B 45 466 95 HOH HOH . S 4 HOH B 46 467 96 HOH HOH . S 4 HOH B 47 468 97 HOH HOH . S 4 HOH B 48 469 98 HOH HOH . S 4 HOH B 49 470 99 HOH HOH . S 4 HOH B 50 471 100 HOH HOH . S 4 HOH B 51 472 101 HOH HOH . S 4 HOH B 52 473 102 HOH HOH . S 4 HOH B 53 474 103 HOH HOH . S 4 HOH B 54 475 104 HOH HOH . S 4 HOH B 55 476 105 HOH HOH . S 4 HOH B 56 477 106 HOH HOH . S 4 HOH B 57 478 107 HOH HOH . S 4 HOH B 58 479 108 HOH HOH . S 4 HOH B 59 480 109 HOH HOH . S 4 HOH B 60 481 110 HOH HOH . S 4 HOH B 61 482 111 HOH HOH . S 4 HOH B 62 483 112 HOH HOH . S 4 HOH B 63 484 113 HOH HOH . S 4 HOH B 64 485 114 HOH HOH . S 4 HOH B 65 486 115 HOH HOH . S 4 HOH B 66 487 116 HOH HOH . S 4 HOH B 67 488 117 HOH HOH . S 4 HOH B 68 489 118 HOH HOH . S 4 HOH B 69 490 119 HOH HOH . S 4 HOH B 70 491 138 HOH HOH . S 4 HOH B 71 492 139 HOH HOH . S 4 HOH B 72 493 140 HOH HOH . S 4 HOH B 73 494 141 HOH HOH . S 4 HOH B 74 495 142 HOH HOH . S 4 HOH B 75 496 143 HOH HOH . S 4 HOH B 76 497 144 HOH HOH . S 4 HOH B 77 498 145 HOH HOH . S 4 HOH B 78 499 146 HOH HOH . S 4 HOH B 79 500 147 HOH HOH . S 4 HOH B 80 501 148 HOH HOH . S 4 HOH B 81 502 149 HOH HOH . S 4 HOH B 82 503 150 HOH HOH . S 4 HOH B 83 504 151 HOH HOH . S 4 HOH B 84 505 152 HOH HOH . S 4 HOH B 85 506 153 HOH HOH . S 4 HOH B 86 507 154 HOH HOH . S 4 HOH B 87 508 155 HOH HOH . S 4 HOH B 88 509 160 HOH HOH . S 4 HOH B 89 510 164 HOH HOH . S 4 HOH B 90 511 165 HOH HOH . S 4 HOH B 91 512 166 HOH HOH . S 4 HOH B 92 513 167 HOH HOH . S 4 HOH B 93 514 168 HOH HOH . S 4 HOH B 94 515 169 HOH HOH . S 4 HOH B 95 516 170 HOH HOH . S 4 HOH B 96 517 171 HOH HOH . S 4 HOH B 97 518 180 HOH HOH . S 4 HOH B 98 519 181 HOH HOH . S 4 HOH B 99 520 184 HOH HOH . S 4 HOH B 100 521 185 HOH HOH . S 4 HOH B 101 522 186 HOH HOH . S 4 HOH B 102 523 194 HOH HOH . S 4 HOH B 103 524 199 HOH HOH . S 4 HOH B 104 525 200 HOH HOH . S 4 HOH B 105 526 203 HOH HOH . S 4 HOH B 106 527 204 HOH HOH . S 4 HOH B 107 528 205 HOH HOH . S 4 HOH B 108 529 206 HOH HOH . S 4 HOH B 109 530 213 HOH HOH . S 4 HOH B 110 531 218 HOH HOH . S 4 HOH B 111 532 221 HOH HOH . S 4 HOH B 112 533 228 HOH HOH . S 4 HOH B 113 534 229 HOH HOH . S 4 HOH B 114 535 231 HOH HOH . S 4 HOH B 115 536 232 HOH HOH . S 4 HOH B 116 537 233 HOH HOH . S 4 HOH B 117 538 234 HOH HOH . S 4 HOH B 118 539 235 HOH HOH . S 4 HOH B 119 540 236 HOH HOH . S 4 HOH B 120 541 237 HOH HOH . S 4 HOH B 121 542 238 HOH HOH . S 4 HOH B 122 543 239 HOH HOH . S 4 HOH B 123 544 240 HOH HOH . S 4 HOH B 124 545 241 HOH HOH . S 4 HOH B 125 546 242 HOH HOH . S 4 HOH B 126 547 243 HOH HOH . S 4 HOH B 127 548 245 HOH HOH . S 4 HOH B 128 549 246 HOH HOH . S 4 HOH B 129 550 247 HOH HOH . S 4 HOH B 130 551 257 HOH HOH . S 4 HOH B 131 552 259 HOH HOH . S 4 HOH B 132 554 270 HOH HOH . S 4 HOH B 133 555 271 HOH HOH . S 4 HOH B 134 556 272 HOH HOH . S 4 HOH B 135 557 273 HOH HOH . S 4 HOH B 136 558 279 HOH HOH . S 4 HOH B 137 559 282 HOH HOH . S 4 HOH B 138 560 284 HOH HOH . S 4 HOH B 139 561 285 HOH HOH . S 4 HOH B 140 562 274 HOH HOH . S 4 HOH B 141 563 275 HOH HOH . S 4 HOH B 142 564 289 HOH HOH . S 4 HOH B 143 565 292 HOH HOH . S 4 HOH B 144 566 293 HOH HOH . S 4 HOH B 145 567 295 HOH HOH . S 4 HOH B 146 568 296 HOH HOH . S 4 HOH B 147 569 297 HOH HOH . S 4 HOH B 148 570 287 HOH HOH . S 4 HOH B 149 571 299 HOH HOH . S 4 HOH B 150 572 300 HOH HOH . S 4 HOH B 151 573 304 HOH HOH . S 4 HOH B 152 574 286 HOH HOH . S 4 HOH B 153 575 288 HOH HOH . S 4 HOH B 154 576 298 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . J 3 32.825 -14.992 37.394 1 41.09 ? C1 EDO 423 A 1 HETATM 2 O O1 EDO . . . J 3 32.234 -14.554 36.174 1 38.85 ? O1 EDO 423 A 1 HETATM 3 C C2 EDO . . . J 3 34.294 -14.595 37.399 1 40.38 ? C2 EDO 423 A 1 HETATM 4 O O2 EDO . . . J 3 34.931 -15.102 38.562 1 43.98 ? O2 EDO 423 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 333 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #