data_3MVT # _model_server_result.job_id -lGYOCD4AsIUb9OWK7bVLw _model_server_result.datetime_utc '2024-11-22 09:27:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mvt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":902}' # _entry.id 3MVT # _exptl.entry_id 3MVT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.76 _cell.angle_gamma 90 _cell.entry_id 3MVT _cell.length_a 98.833 _cell.length_b 93.827 _cell.length_c 86.18 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MVT _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,F 1 1 B,D,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 129 n n C1 C2 GOL sing 130 n n C1 H11 GOL sing 131 n n C1 H12 GOL sing 132 n n O1 HO1 GOL sing 133 n n C2 O2 GOL sing 134 n n C2 C3 GOL sing 135 n n C2 H2 GOL sing 136 n n O2 HO2 GOL sing 137 n n C3 O3 GOL sing 138 n n C3 H31 GOL sing 139 n n C3 H32 GOL sing 140 n n O3 HO3 GOL sing 141 n n # _atom_sites.entry_id 3MVT _atom_sites.fract_transf_matrix[1][1] 0.010118 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.0012 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010658 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011685 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL A 1 902 902 GOL GOL . D 2 GOL C 1 902 902 GOL GOL . E 3 CL C 1 401 401 CL CL . F 4 HOH A 1 1 1 HOH HOH . F 4 HOH A 2 3 3 HOH HOH . F 4 HOH A 3 353 4 HOH HOH . F 4 HOH A 4 354 6 HOH HOH . F 4 HOH A 5 355 10 HOH HOH . F 4 HOH A 6 356 13 HOH HOH . F 4 HOH A 7 357 15 HOH HOH . F 4 HOH A 8 358 17 HOH HOH . F 4 HOH A 9 359 21 HOH HOH . F 4 HOH A 10 360 23 HOH HOH . F 4 HOH A 11 361 24 HOH HOH . F 4 HOH A 12 362 25 HOH HOH . F 4 HOH A 13 363 27 HOH HOH . F 4 HOH A 14 364 30 HOH HOH . F 4 HOH A 15 365 34 HOH HOH . F 4 HOH A 16 366 37 HOH HOH . F 4 HOH A 17 367 39 HOH HOH . F 4 HOH A 18 368 40 HOH HOH . F 4 HOH A 19 369 41 HOH HOH . F 4 HOH A 20 370 42 HOH HOH . F 4 HOH A 21 371 46 HOH HOH . F 4 HOH A 22 372 48 HOH HOH . F 4 HOH A 23 373 51 HOH HOH . F 4 HOH A 24 374 52 HOH HOH . F 4 HOH A 25 375 53 HOH HOH . F 4 HOH A 26 376 55 HOH HOH . F 4 HOH A 27 377 56 HOH HOH . F 4 HOH A 28 378 58 HOH HOH . F 4 HOH A 29 379 60 HOH HOH . F 4 HOH A 30 380 65 HOH HOH . F 4 HOH A 31 381 68 HOH HOH . F 4 HOH A 32 382 71 HOH HOH . F 4 HOH A 33 383 73 HOH HOH . F 4 HOH A 34 384 76 HOH HOH . F 4 HOH A 35 385 79 HOH HOH . F 4 HOH A 36 386 82 HOH HOH . F 4 HOH A 37 387 83 HOH HOH . F 4 HOH A 38 388 86 HOH HOH . F 4 HOH A 39 389 88 HOH HOH . F 4 HOH A 40 390 89 HOH HOH . F 4 HOH A 41 391 90 HOH HOH . F 4 HOH A 42 392 92 HOH HOH . F 4 HOH A 43 393 93 HOH HOH . F 4 HOH A 44 394 97 HOH HOH . F 4 HOH A 45 395 98 HOH HOH . F 4 HOH A 46 396 99 HOH HOH . F 4 HOH A 47 397 100 HOH HOH . F 4 HOH A 48 398 102 HOH HOH . F 4 HOH A 49 399 103 HOH HOH . F 4 HOH A 50 400 104 HOH HOH . F 4 HOH A 51 401 106 HOH HOH . F 4 HOH A 52 402 107 HOH HOH . F 4 HOH A 53 403 113 HOH HOH . F 4 HOH A 54 404 114 HOH HOH . F 4 HOH A 55 405 123 HOH HOH . F 4 HOH A 56 406 124 HOH HOH . F 4 HOH A 57 407 125 HOH HOH . F 4 HOH A 58 408 130 HOH HOH . F 4 HOH A 59 409 132 HOH HOH . F 4 HOH A 60 410 134 HOH HOH . F 4 HOH A 61 411 138 HOH HOH . F 4 HOH A 62 412 139 HOH HOH . F 4 HOH A 63 413 140 HOH HOH . F 4 HOH A 64 414 141 HOH HOH . F 4 HOH A 65 415 143 HOH HOH . F 4 HOH A 66 416 144 HOH HOH . F 4 HOH A 67 417 145 HOH HOH . F 4 HOH A 68 418 148 HOH HOH . F 4 HOH A 69 419 151 HOH HOH . F 4 HOH A 70 420 152 HOH HOH . F 4 HOH A 71 421 157 HOH HOH . F 4 HOH A 72 422 158 HOH HOH . F 4 HOH A 73 423 159 HOH HOH . F 4 HOH A 74 424 160 HOH HOH . F 4 HOH A 75 425 163 HOH HOH . F 4 HOH A 76 426 165 HOH HOH . F 4 HOH A 77 427 166 HOH HOH . F 4 HOH A 78 428 167 HOH HOH . F 4 HOH A 79 429 168 HOH HOH . F 4 HOH A 80 430 169 HOH HOH . F 4 HOH A 81 431 173 HOH HOH . F 4 HOH A 82 432 175 HOH HOH . F 4 HOH A 83 433 177 HOH HOH . F 4 HOH A 84 434 183 HOH HOH . F 4 HOH A 85 435 185 HOH HOH . F 4 HOH A 86 436 186 HOH HOH . F 4 HOH A 87 437 187 HOH HOH . F 4 HOH A 88 438 188 HOH HOH . F 4 HOH A 89 439 189 HOH HOH . F 4 HOH A 90 440 194 HOH HOH . F 4 HOH A 91 441 197 HOH HOH . F 4 HOH A 92 442 198 HOH HOH . F 4 HOH A 93 443 199 HOH HOH . F 4 HOH A 94 444 200 HOH HOH . F 4 HOH A 95 445 201 HOH HOH . F 4 HOH A 96 446 202 HOH HOH . F 4 HOH A 97 447 203 HOH HOH . F 4 HOH A 98 448 204 HOH HOH . F 4 HOH A 99 449 205 HOH HOH . F 4 HOH A 100 450 214 HOH HOH . F 4 HOH A 101 451 215 HOH HOH . F 4 HOH A 102 452 219 HOH HOH . F 4 HOH A 103 453 220 HOH HOH . F 4 HOH A 104 454 221 HOH HOH . F 4 HOH A 105 455 223 HOH HOH . F 4 HOH A 106 456 224 HOH HOH . F 4 HOH A 107 457 225 HOH HOH . F 4 HOH A 108 458 226 HOH HOH . F 4 HOH A 109 459 229 HOH HOH . F 4 HOH A 110 460 231 HOH HOH . F 4 HOH A 111 461 236 HOH HOH . F 4 HOH A 112 462 237 HOH HOH . F 4 HOH A 113 463 238 HOH HOH . F 4 HOH A 114 464 239 HOH HOH . F 4 HOH A 115 465 240 HOH HOH . F 4 HOH A 116 466 241 HOH HOH . F 4 HOH A 117 467 242 HOH HOH . F 4 HOH A 118 468 244 HOH HOH . F 4 HOH A 119 469 249 HOH HOH . F 4 HOH A 120 470 250 HOH HOH . F 4 HOH A 121 471 251 HOH HOH . F 4 HOH A 122 472 253 HOH HOH . F 4 HOH A 123 473 254 HOH HOH . F 4 HOH A 124 474 255 HOH HOH . F 4 HOH A 125 475 256 HOH HOH . F 4 HOH A 126 476 257 HOH HOH . G 4 HOH C 1 2 2 HOH HOH . G 4 HOH C 2 353 5 HOH HOH . G 4 HOH C 3 354 7 HOH HOH . G 4 HOH C 4 355 8 HOH HOH . G 4 HOH C 5 356 9 HOH HOH . G 4 HOH C 6 357 11 HOH HOH . G 4 HOH C 7 358 12 HOH HOH . G 4 HOH C 8 359 14 HOH HOH . G 4 HOH C 9 360 16 HOH HOH . G 4 HOH C 10 361 18 HOH HOH . G 4 HOH C 11 362 19 HOH HOH . G 4 HOH C 12 363 20 HOH HOH . G 4 HOH C 13 364 22 HOH HOH . G 4 HOH C 14 365 26 HOH HOH . G 4 HOH C 15 366 28 HOH HOH . G 4 HOH C 16 367 29 HOH HOH . G 4 HOH C 17 368 31 HOH HOH . G 4 HOH C 18 369 32 HOH HOH . G 4 HOH C 19 370 33 HOH HOH . G 4 HOH C 20 371 35 HOH HOH . G 4 HOH C 21 372 36 HOH HOH . G 4 HOH C 22 373 38 HOH HOH . G 4 HOH C 23 374 43 HOH HOH . G 4 HOH C 24 375 44 HOH HOH . G 4 HOH C 25 376 45 HOH HOH . G 4 HOH C 26 377 47 HOH HOH . G 4 HOH C 27 378 49 HOH HOH . G 4 HOH C 28 379 50 HOH HOH . G 4 HOH C 29 380 54 HOH HOH . G 4 HOH C 30 381 57 HOH HOH . G 4 HOH C 31 382 59 HOH HOH . G 4 HOH C 32 383 61 HOH HOH . G 4 HOH C 33 384 62 HOH HOH . G 4 HOH C 34 385 63 HOH HOH . G 4 HOH C 35 386 64 HOH HOH . G 4 HOH C 36 387 66 HOH HOH . G 4 HOH C 37 388 67 HOH HOH . G 4 HOH C 38 389 69 HOH HOH . G 4 HOH C 39 390 70 HOH HOH . G 4 HOH C 40 391 72 HOH HOH . G 4 HOH C 41 392 74 HOH HOH . G 4 HOH C 42 393 75 HOH HOH . G 4 HOH C 43 394 77 HOH HOH . G 4 HOH C 44 395 78 HOH HOH . G 4 HOH C 45 396 80 HOH HOH . G 4 HOH C 46 397 81 HOH HOH . G 4 HOH C 47 398 84 HOH HOH . G 4 HOH C 48 399 85 HOH HOH . G 4 HOH C 49 400 87 HOH HOH . G 4 HOH C 50 402 91 HOH HOH . G 4 HOH C 51 403 94 HOH HOH . G 4 HOH C 52 404 95 HOH HOH . G 4 HOH C 53 405 96 HOH HOH . G 4 HOH C 54 406 101 HOH HOH . G 4 HOH C 55 407 105 HOH HOH . G 4 HOH C 56 408 108 HOH HOH . G 4 HOH C 57 409 109 HOH HOH . G 4 HOH C 58 410 110 HOH HOH . G 4 HOH C 59 411 111 HOH HOH . G 4 HOH C 60 412 112 HOH HOH . G 4 HOH C 61 413 115 HOH HOH . G 4 HOH C 62 414 116 HOH HOH . G 4 HOH C 63 415 117 HOH HOH . G 4 HOH C 64 416 118 HOH HOH . G 4 HOH C 65 417 119 HOH HOH . G 4 HOH C 66 418 120 HOH HOH . G 4 HOH C 67 419 121 HOH HOH . G 4 HOH C 68 420 122 HOH HOH . G 4 HOH C 69 421 126 HOH HOH . G 4 HOH C 70 422 127 HOH HOH . G 4 HOH C 71 423 128 HOH HOH . G 4 HOH C 72 424 129 HOH HOH . G 4 HOH C 73 425 131 HOH HOH . G 4 HOH C 74 426 133 HOH HOH . G 4 HOH C 75 427 135 HOH HOH . G 4 HOH C 76 428 136 HOH HOH . G 4 HOH C 77 429 137 HOH HOH . G 4 HOH C 78 430 142 HOH HOH . G 4 HOH C 79 431 146 HOH HOH . G 4 HOH C 80 432 147 HOH HOH . G 4 HOH C 81 433 149 HOH HOH . G 4 HOH C 82 434 150 HOH HOH . G 4 HOH C 83 435 153 HOH HOH . G 4 HOH C 84 436 154 HOH HOH . G 4 HOH C 85 437 155 HOH HOH . G 4 HOH C 86 438 156 HOH HOH . G 4 HOH C 87 439 161 HOH HOH . G 4 HOH C 88 440 162 HOH HOH . G 4 HOH C 89 441 164 HOH HOH . G 4 HOH C 90 442 170 HOH HOH . G 4 HOH C 91 443 171 HOH HOH . G 4 HOH C 92 444 172 HOH HOH . G 4 HOH C 93 445 174 HOH HOH . G 4 HOH C 94 446 176 HOH HOH . G 4 HOH C 95 447 178 HOH HOH . G 4 HOH C 96 448 179 HOH HOH . G 4 HOH C 97 449 180 HOH HOH . G 4 HOH C 98 450 181 HOH HOH . G 4 HOH C 99 451 182 HOH HOH . G 4 HOH C 100 452 184 HOH HOH . G 4 HOH C 101 453 190 HOH HOH . G 4 HOH C 102 454 191 HOH HOH . G 4 HOH C 103 455 192 HOH HOH . G 4 HOH C 104 456 193 HOH HOH . G 4 HOH C 105 457 195 HOH HOH . G 4 HOH C 106 458 196 HOH HOH . G 4 HOH C 107 459 206 HOH HOH . G 4 HOH C 108 460 207 HOH HOH . G 4 HOH C 109 461 208 HOH HOH . G 4 HOH C 110 462 209 HOH HOH . G 4 HOH C 111 463 210 HOH HOH . G 4 HOH C 112 464 211 HOH HOH . G 4 HOH C 113 465 212 HOH HOH . G 4 HOH C 114 466 213 HOH HOH . G 4 HOH C 115 467 216 HOH HOH . G 4 HOH C 116 468 217 HOH HOH . G 4 HOH C 117 469 218 HOH HOH . G 4 HOH C 118 470 222 HOH HOH . G 4 HOH C 119 471 227 HOH HOH . G 4 HOH C 120 472 228 HOH HOH . G 4 HOH C 121 473 230 HOH HOH . G 4 HOH C 122 474 232 HOH HOH . G 4 HOH C 123 475 233 HOH HOH . G 4 HOH C 124 476 234 HOH HOH . G 4 HOH C 125 477 235 HOH HOH . G 4 HOH C 126 478 243 HOH HOH . G 4 HOH C 127 479 245 HOH HOH . G 4 HOH C 128 480 246 HOH HOH . G 4 HOH C 129 481 247 HOH HOH . G 4 HOH C 130 482 248 HOH HOH . G 4 HOH C 131 483 252 HOH HOH . G 4 HOH C 132 484 259 HOH HOH . G 4 HOH C 133 485 260 HOH HOH . G 4 HOH C 134 486 261 HOH HOH . G 4 HOH C 135 487 262 HOH HOH . G 4 HOH C 136 488 263 HOH HOH . G 4 HOH C 137 489 264 HOH HOH . G 4 HOH C 138 490 265 HOH HOH . G 4 HOH C 139 491 266 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 2 72.685 5.867 50.547 1 30.03 ? C1 GOL 902 C 1 HETATM 2 O O1 GOL . . . D 2 73.686 4.87 50.538 1 33.65 ? O1 GOL 902 C 1 HETATM 3 C C2 GOL . . . D 2 73.142 6.868 51.583 1 30.26 ? C2 GOL 902 C 1 HETATM 4 O O2 GOL . . . D 2 72.057 7.712 51.922 1 29.99 ? O2 GOL 902 C 1 HETATM 5 C C3 GOL . . . D 2 74.386 7.594 51.067 1 28.49 ? C3 GOL 902 C 1 HETATM 6 O O3 GOL . . . D 2 74.086 8.195 49.824 1 28.55 ? O3 GOL 902 C 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 255 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #