data_3MWI # _model_server_result.job_id ztYws7QAbjT3e8ROv2c5pA _model_server_result.datetime_utc '2024-10-22 03:26:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mwi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1244}' # _entry.id 3MWI # _exptl.entry_id 3MWI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 204.185 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-nitro-1H-indole-2-carboximidamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3MWI _cell.length_a 121.465 _cell.length_b 121.465 _cell.length_c 43.097 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MWI _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 31 U CYS 42 1_555 A SG CYS 47 U CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? disulf ? disulf2 A SG CYS 39 U CYS 50 1_555 A SG CYS 110 U CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf3 A SG CYS 135 U CYS 136 1_555 A SG CYS 204 U CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? disulf ? disulf4 A SG CYS 167 U CYS 168 1_555 A SG CYS 183 U CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.018 ? disulf ? disulf5 A SG CYS 194 U CYS 191 1_555 A SG CYS 222 U CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? # _chem_comp.formula 'C9 H8 N4 O2' _chem_comp.formula_weight 204.185 _chem_comp.id B25 _chem_comp.mon_nstd_flag . _chem_comp.name 5-nitro-1H-indole-2-carboximidamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 5-nitro-1H-indole-2-amidine # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C9 B25 doub 70 n n N4 C8 B25 sing 71 n y N4 C1 B25 sing 72 n y C9 C8 B25 sing 73 n n C9 N2 B25 sing 74 n n C2 C1 B25 doub 75 n y C2 C3 B25 sing 76 n y C8 C7 B25 doub 77 n y C1 C6 B25 sing 78 n y C3 C4 B25 doub 79 n y C7 C6 B25 sing 80 n y C6 C5 B25 doub 81 n y C4 C5 B25 sing 82 n y C4 N1 B25 sing 83 n n N1 O2 B25 sing 84 n n N1 O1 B25 doub 85 n n C2 H2 B25 sing 86 n n N2 H1N2 B25 sing 87 n n N2 H2N2 B25 sing 88 n n C3 H3 B25 sing 89 n n N3 H1N3 B25 sing 90 n n N4 HN4 B25 sing 91 n n C5 H5 B25 sing 92 n n C7 H7 B25 sing 93 n n # _atom_sites.entry_id 3MWI _atom_sites.fract_transf_matrix[1][1] 0.008233 _atom_sites.fract_transf_matrix[1][2] 0.004753 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009506 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.023203 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 B25 U 1 1244 1244 B25 B25 . C 3 SO4 U 1 1 1 SO4 SO4 . D 3 SO4 U 1 2 2 SO4 SO4 . E 4 HOH U 1 3 3 HOH HOH . E 4 HOH U 2 4 4 HOH HOH . E 4 HOH U 3 5 5 HOH HOH . E 4 HOH U 4 6 6 HOH HOH . E 4 HOH U 5 7 7 HOH HOH . E 4 HOH U 6 8 8 HOH HOH . E 4 HOH U 7 9 9 HOH HOH . E 4 HOH U 8 10 10 HOH HOH . E 4 HOH U 9 11 11 HOH HOH . E 4 HOH U 10 12 12 HOH HOH . E 4 HOH U 11 13 13 HOH HOH . E 4 HOH U 12 14 14 HOH HOH . E 4 HOH U 13 15 15 HOH HOH . E 4 HOH U 14 251 251 HOH HOH . E 4 HOH U 15 252 252 HOH HOH . E 4 HOH U 16 253 253 HOH HOH . E 4 HOH U 17 254 254 HOH HOH . E 4 HOH U 18 255 255 HOH HOH . E 4 HOH U 19 256 256 HOH HOH . E 4 HOH U 20 257 257 HOH HOH . E 4 HOH U 21 258 258 HOH HOH . E 4 HOH U 22 259 259 HOH HOH . E 4 HOH U 23 260 260 HOH HOH . E 4 HOH U 24 261 261 HOH HOH . E 4 HOH U 25 262 262 HOH HOH . E 4 HOH U 26 263 263 HOH HOH . E 4 HOH U 27 264 264 HOH HOH . E 4 HOH U 28 265 265 HOH HOH . E 4 HOH U 29 266 266 HOH HOH . E 4 HOH U 30 267 267 HOH HOH . E 4 HOH U 31 268 268 HOH HOH . E 4 HOH U 32 269 269 HOH HOH . E 4 HOH U 33 270 270 HOH HOH . E 4 HOH U 34 271 271 HOH HOH . E 4 HOH U 35 272 272 HOH HOH . E 4 HOH U 36 273 273 HOH HOH . E 4 HOH U 37 274 274 HOH HOH . E 4 HOH U 38 275 275 HOH HOH . E 4 HOH U 39 276 276 HOH HOH . E 4 HOH U 40 277 277 HOH HOH . E 4 HOH U 41 278 278 HOH HOH . E 4 HOH U 42 279 279 HOH HOH . E 4 HOH U 43 280 280 HOH HOH . E 4 HOH U 44 281 281 HOH HOH . E 4 HOH U 45 282 282 HOH HOH . E 4 HOH U 46 283 283 HOH HOH . E 4 HOH U 47 284 284 HOH HOH . E 4 HOH U 48 285 285 HOH HOH . E 4 HOH U 49 286 286 HOH HOH . E 4 HOH U 50 287 287 HOH HOH . E 4 HOH U 51 288 288 HOH HOH . E 4 HOH U 52 289 289 HOH HOH . E 4 HOH U 53 290 290 HOH HOH . E 4 HOH U 54 291 291 HOH HOH . E 4 HOH U 55 292 292 HOH HOH . E 4 HOH U 56 293 293 HOH HOH . E 4 HOH U 57 294 294 HOH HOH . E 4 HOH U 58 295 295 HOH HOH . E 4 HOH U 59 296 296 HOH HOH . E 4 HOH U 60 297 297 HOH HOH . E 4 HOH U 61 298 298 HOH HOH . E 4 HOH U 62 299 299 HOH HOH . E 4 HOH U 63 300 300 HOH HOH . E 4 HOH U 64 301 301 HOH HOH . E 4 HOH U 65 302 302 HOH HOH . E 4 HOH U 66 303 303 HOH HOH . E 4 HOH U 67 304 304 HOH HOH . E 4 HOH U 68 305 305 HOH HOH . E 4 HOH U 69 306 306 HOH HOH . E 4 HOH U 70 307 307 HOH HOH . E 4 HOH U 71 308 308 HOH HOH . E 4 HOH U 72 309 309 HOH HOH . E 4 HOH U 73 310 310 HOH HOH . E 4 HOH U 74 311 311 HOH HOH . E 4 HOH U 75 312 312 HOH HOH . E 4 HOH U 76 313 313 HOH HOH . E 4 HOH U 77 314 314 HOH HOH . E 4 HOH U 78 315 315 HOH HOH . E 4 HOH U 79 316 316 HOH HOH . E 4 HOH U 80 317 317 HOH HOH . E 4 HOH U 81 318 318 HOH HOH . E 4 HOH U 82 319 319 HOH HOH . E 4 HOH U 83 320 320 HOH HOH . E 4 HOH U 84 321 321 HOH HOH . E 4 HOH U 85 322 322 HOH HOH . E 4 HOH U 86 323 323 HOH HOH . E 4 HOH U 87 324 324 HOH HOH . E 4 HOH U 88 325 325 HOH HOH . E 4 HOH U 89 326 326 HOH HOH . E 4 HOH U 90 327 327 HOH HOH . E 4 HOH U 91 328 328 HOH HOH . E 4 HOH U 92 329 329 HOH HOH . E 4 HOH U 93 330 330 HOH HOH . E 4 HOH U 94 331 331 HOH HOH . E 4 HOH U 95 332 332 HOH HOH . E 4 HOH U 96 333 333 HOH HOH . E 4 HOH U 97 334 334 HOH HOH . E 4 HOH U 98 335 335 HOH HOH . E 4 HOH U 99 336 336 HOH HOH . E 4 HOH U 100 337 337 HOH HOH . E 4 HOH U 101 338 338 HOH HOH . E 4 HOH U 102 339 339 HOH HOH . E 4 HOH U 103 340 340 HOH HOH . E 4 HOH U 104 341 341 HOH HOH . E 4 HOH U 105 342 342 HOH HOH . E 4 HOH U 106 343 343 HOH HOH . E 4 HOH U 107 344 344 HOH HOH . E 4 HOH U 108 345 345 HOH HOH . E 4 HOH U 109 346 346 HOH HOH . E 4 HOH U 110 347 347 HOH HOH . E 4 HOH U 111 348 348 HOH HOH . E 4 HOH U 112 349 349 HOH HOH . E 4 HOH U 113 350 350 HOH HOH . E 4 HOH U 114 351 351 HOH HOH . E 4 HOH U 115 352 352 HOH HOH . E 4 HOH U 116 353 353 HOH HOH . E 4 HOH U 117 354 354 HOH HOH . E 4 HOH U 118 355 355 HOH HOH . E 4 HOH U 119 356 356 HOH HOH . E 4 HOH U 120 357 357 HOH HOH . E 4 HOH U 121 358 358 HOH HOH . E 4 HOH U 122 359 359 HOH HOH . E 4 HOH U 123 360 360 HOH HOH . E 4 HOH U 124 361 361 HOH HOH . E 4 HOH U 125 362 362 HOH HOH . E 4 HOH U 126 363 363 HOH HOH . E 4 HOH U 127 364 364 HOH HOH . E 4 HOH U 128 365 365 HOH HOH . E 4 HOH U 129 366 366 HOH HOH . E 4 HOH U 130 367 367 HOH HOH . E 4 HOH U 131 368 368 HOH HOH . E 4 HOH U 132 369 369 HOH HOH . E 4 HOH U 133 370 370 HOH HOH . E 4 HOH U 134 371 371 HOH HOH . E 4 HOH U 135 372 372 HOH HOH . E 4 HOH U 136 373 373 HOH HOH . E 4 HOH U 137 374 374 HOH HOH . E 4 HOH U 138 375 375 HOH HOH . E 4 HOH U 139 376 376 HOH HOH . E 4 HOH U 140 377 377 HOH HOH . E 4 HOH U 141 378 378 HOH HOH . E 4 HOH U 142 379 379 HOH HOH . E 4 HOH U 143 380 380 HOH HOH . E 4 HOH U 144 381 381 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 B25 . . . B 2 -29.347 -17.303 9.417 1 35.82 ? C1 B25 1244 U 1 HETATM 2 N N1 B25 . . . B 2 -26.887 -16.393 12.582 1 40.45 ? N1 B25 1244 U 1 HETATM 3 O O1 B25 . . . B 2 -26.338 -17.256 13.242 1 41.2 ? O1 B25 1244 U 1 HETATM 4 C C2 B25 . . . B 2 -28.259 -16.624 9.286 1 37.6 ? C2 B25 1244 U 1 HETATM 5 N N2 B25 . . . B 2 -33.268 -19.612 9.708 1 35.3 ? N2 B25 1244 U 1 HETATM 6 O O2 B25 . . . B 2 -26.705 -15.264 12.872 1 39.93 ? O2 B25 1244 U 1 HETATM 7 C C3 B25 . . . B 2 -27.442 -16.304 10.291 1 38.3 ? C3 B25 1244 U 1 HETATM 8 N N3 B25 . . . B 2 -32.869 -18.839 7.589 1 31.53 ? N3 B25 1244 U 1 HETATM 9 C C4 B25 . . . B 2 -27.765 -16.697 11.519 1 39.43 ? C4 B25 1244 U 1 HETATM 10 N N4 B25 . . . B 2 -30.283 -17.696 8.626 1 35.6 ? N4 B25 1244 U 1 HETATM 11 C C5 B25 . . . B 2 -28.926 -17.428 11.646 1 38.28 ? C5 B25 1244 U 1 HETATM 12 C C6 B25 . . . B 2 -29.691 -17.695 10.598 1 36.42 ? C6 B25 1244 U 1 HETATM 13 C C7 B25 . . . B 2 -30.887 -18.388 10.585 1 36.26 ? C7 B25 1244 U 1 HETATM 14 C C8 B25 . . . B 2 -31.249 -18.343 9.306 1 35.15 ? C8 B25 1244 U 1 HETATM 15 C C9 B25 . . . B 2 -32.489 -18.976 8.813 1 34.53 ? C9 B25 1244 U 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 220 _model_server_stats.encode_time_ms 14 _model_server_stats.element_count 15 #