data_3MXE # _model_server_result.job_id 1ODlAKoDq8tMv0OLUdbjdA _model_server_result.datetime_utc '2025-01-10 09:07:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mxe # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":200}' # _entry.id 3MXE # _exptl.entry_id 3MXE _exptl.method 'X-RAY DIFFRACTION' # _entity.details 'Synthesized in the laboratory' _entity.formula_weight 690.753 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5S)-N-{(1S,2R)-3-[(1,3-benzothiazol-6-ylsulfonyl)(2-methylpropyl)amino]-1-benzyl-2-hydroxypropyl}-2-oxo-3-[2-(trifluoromethyl)phenyl]-1,3-oxazolidine-5-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MXE _cell.length_a 50.79 _cell.length_b 58.245 _cell.length_c 62.014 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MXE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C32 H33 F3 N4 O6 S2' _chem_comp.formula_weight 690.753 _chem_comp.id K54 _chem_comp.mon_nstd_flag . _chem_comp.name (5S)-N-{(1S,2R)-3-[(1,3-benzothiazol-6-ylsulfonyl)(2-methylpropyl)amino]-1-benzyl-2-hydroxypropyl}-2-oxo-3-[2-(trifluoromethyl)phenyl]-1,3-oxazolidine-5-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms (5S)-N-[(1S,2R)-3-[(6-Benzothiazolylsulfonyl)(2-methylpropyl)amino]-2-hydroxy-1-(phenylmethyl)propyl]-2-oxo-3-[2-(trifluoromethyl)phenyl]oxazolidine-5-carboxamide # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 N1 K54 doub 179 n y C1 S1 K54 sing 180 n y F1 C46 K54 sing 181 n n N1 C2 K54 sing 182 n y S1 C3 K54 sing 183 n y C2 C3 K54 doub 184 n y C2 C7 K54 sing 185 n y F2 C46 K54 sing 186 n n C3 C4 K54 sing 187 n y F3 C46 K54 sing 188 n n C4 C5 K54 doub 189 n y C5 C6 K54 sing 190 n y C5 S8 K54 sing 191 n n C6 C7 K54 doub 192 n y S8 O9 K54 doub 193 n n S8 O10 K54 doub 194 n n S8 N11 K54 sing 195 n n N11 C12 K54 sing 196 n n N11 C16 K54 sing 197 n n C12 C13 K54 sing 198 n n C13 C14 K54 sing 199 n n C13 C15 K54 sing 200 n n C16 C17 K54 sing 201 n n C17 O18 K54 sing 202 n n C17 C19 K54 sing 203 n n C19 N20 K54 sing 204 n n C19 C32 K54 sing 205 n n N20 C21 K54 sing 206 n n C21 O22 K54 doub 207 n n C21 C29 K54 sing 208 n n N24 C25 K54 sing 209 n n N24 C26 K54 sing 210 n n N24 C43 K54 sing 211 n n C25 C29 K54 sing 212 n n C26 O27 K54 doub 213 n n C26 O28 K54 sing 214 n n O28 C29 K54 sing 215 n n C32 C38 K54 sing 216 n n C33 C34 K54 doub 217 n y C33 C38 K54 sing 218 n y C34 C35 K54 sing 219 n y C35 C36 K54 doub 220 n y C36 C37 K54 sing 221 n y C37 C38 K54 doub 222 n y C40 C41 K54 doub 223 n y C40 C45 K54 sing 224 n y C41 C42 K54 sing 225 n y C42 C43 K54 doub 226 n y C42 C46 K54 sing 227 n n C43 C44 K54 sing 228 n y C44 C45 K54 doub 229 n y C1 H1 K54 sing 230 n n C4 H4 K54 sing 231 n n C6 H6 K54 sing 232 n n C7 H7 K54 sing 233 n n C12 H12 K54 sing 234 n n C12 H12A K54 sing 235 n n C13 H13 K54 sing 236 n n C14 H14 K54 sing 237 n n C14 H14A K54 sing 238 n n C14 H14B K54 sing 239 n n C15 H15 K54 sing 240 n n C15 H15A K54 sing 241 n n C15 H15B K54 sing 242 n n C16 H16 K54 sing 243 n n C16 H16A K54 sing 244 n n C17 H17 K54 sing 245 n n O18 HO18 K54 sing 246 n n C19 H19 K54 sing 247 n n N20 HN20 K54 sing 248 n n C25 H25 K54 sing 249 n n C25 H25A K54 sing 250 n n C29 H29 K54 sing 251 n n C32 H32 K54 sing 252 n n C32 H32A K54 sing 253 n n C33 H33 K54 sing 254 n n C34 H34 K54 sing 255 n n C35 H35 K54 sing 256 n n C36 H36 K54 sing 257 n n C37 H37 K54 sing 258 n n C40 H40 K54 sing 259 n n C41 H41 K54 sing 260 n n C44 H44 K54 sing 261 n n C45 H45 K54 sing 262 n n # _atom_sites.entry_id 3MXE _atom_sites.fract_transf_matrix[1][1] 0.019689 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017169 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016125 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K54 A 1 200 200 K54 K54 . D 3 PO4 B 1 501 501 PO4 PO4 . E 4 ACT B 1 502 502 ACT ACT . F 5 HOH A 1 100 100 HOH HOH . F 5 HOH A 2 101 1 HOH HOH . F 5 HOH A 3 102 3 HOH HOH . F 5 HOH A 4 103 4 HOH HOH . F 5 HOH A 5 104 6 HOH HOH . F 5 HOH A 6 105 8 HOH HOH . F 5 HOH A 7 106 106 HOH HOH . F 5 HOH A 8 107 10 HOH HOH . F 5 HOH A 9 108 108 HOH HOH . F 5 HOH A 10 109 109 HOH HOH . F 5 HOH A 11 110 110 HOH HOH . F 5 HOH A 12 111 111 HOH HOH . F 5 HOH A 13 112 14 HOH HOH . F 5 HOH A 14 113 113 HOH HOH . F 5 HOH A 15 114 17 HOH HOH . F 5 HOH A 16 115 115 HOH HOH . F 5 HOH A 17 116 19 HOH HOH . F 5 HOH A 18 117 21 HOH HOH . F 5 HOH A 19 118 22 HOH HOH . F 5 HOH A 20 119 119 HOH HOH . F 5 HOH A 21 120 120 HOH HOH . F 5 HOH A 22 121 121 HOH HOH . F 5 HOH A 23 122 27 HOH HOH . F 5 HOH A 24 123 29 HOH HOH . F 5 HOH A 25 124 30 HOH HOH . F 5 HOH A 26 125 33 HOH HOH . F 5 HOH A 27 126 34 HOH HOH . F 5 HOH A 28 127 35 HOH HOH . F 5 HOH A 29 128 36 HOH HOH . F 5 HOH A 30 129 37 HOH HOH . F 5 HOH A 31 130 39 HOH HOH . F 5 HOH A 32 131 40 HOH HOH . F 5 HOH A 33 132 41 HOH HOH . F 5 HOH A 34 133 42 HOH HOH . F 5 HOH A 35 134 46 HOH HOH . F 5 HOH A 36 135 49 HOH HOH . F 5 HOH A 37 136 50 HOH HOH . F 5 HOH A 38 137 51 HOH HOH . F 5 HOH A 39 138 54 HOH HOH . F 5 HOH A 40 139 57 HOH HOH . F 5 HOH A 41 140 62 HOH HOH . F 5 HOH A 42 141 63 HOH HOH . F 5 HOH A 43 142 64 HOH HOH . F 5 HOH A 44 143 65 HOH HOH . F 5 HOH A 45 144 66 HOH HOH . F 5 HOH A 46 145 70 HOH HOH . F 5 HOH A 47 146 71 HOH HOH . F 5 HOH A 48 147 72 HOH HOH . F 5 HOH A 49 148 73 HOH HOH . F 5 HOH A 50 149 74 HOH HOH . F 5 HOH A 51 150 75 HOH HOH . F 5 HOH A 52 151 76 HOH HOH . F 5 HOH A 53 152 77 HOH HOH . F 5 HOH A 54 153 79 HOH HOH . F 5 HOH A 55 154 80 HOH HOH . F 5 HOH A 56 155 86 HOH HOH . F 5 HOH A 57 156 88 HOH HOH . F 5 HOH A 58 157 89 HOH HOH . F 5 HOH A 59 158 90 HOH HOH . G 5 HOH B 1 100 2 HOH HOH . G 5 HOH B 2 101 101 HOH HOH . G 5 HOH B 3 102 102 HOH HOH . G 5 HOH B 4 103 103 HOH HOH . G 5 HOH B 5 104 104 HOH HOH . G 5 HOH B 6 105 105 HOH HOH . G 5 HOH B 7 106 5 HOH HOH . G 5 HOH B 8 107 107 HOH HOH . G 5 HOH B 9 108 7 HOH HOH . G 5 HOH B 10 109 11 HOH HOH . G 5 HOH B 11 110 12 HOH HOH . G 5 HOH B 12 111 13 HOH HOH . G 5 HOH B 13 112 15 HOH HOH . G 5 HOH B 14 113 16 HOH HOH . G 5 HOH B 15 114 114 HOH HOH . G 5 HOH B 16 115 18 HOH HOH . G 5 HOH B 17 116 116 HOH HOH . G 5 HOH B 18 117 117 HOH HOH . G 5 HOH B 19 118 118 HOH HOH . G 5 HOH B 20 119 20 HOH HOH . G 5 HOH B 21 120 23 HOH HOH . G 5 HOH B 22 121 24 HOH HOH . G 5 HOH B 23 122 26 HOH HOH . G 5 HOH B 24 123 28 HOH HOH . G 5 HOH B 25 124 31 HOH HOH . G 5 HOH B 26 125 32 HOH HOH . G 5 HOH B 27 126 38 HOH HOH . G 5 HOH B 28 127 43 HOH HOH . G 5 HOH B 29 128 44 HOH HOH . G 5 HOH B 30 129 45 HOH HOH . G 5 HOH B 31 130 48 HOH HOH . G 5 HOH B 32 131 52 HOH HOH . G 5 HOH B 33 132 55 HOH HOH . G 5 HOH B 34 133 56 HOH HOH . G 5 HOH B 35 134 58 HOH HOH . G 5 HOH B 36 135 59 HOH HOH . G 5 HOH B 37 136 60 HOH HOH . G 5 HOH B 38 137 61 HOH HOH . G 5 HOH B 39 138 67 HOH HOH . G 5 HOH B 40 139 68 HOH HOH . G 5 HOH B 41 140 69 HOH HOH . G 5 HOH B 42 141 78 HOH HOH . G 5 HOH B 43 142 81 HOH HOH . G 5 HOH B 44 143 82 HOH HOH . G 5 HOH B 45 144 83 HOH HOH . G 5 HOH B 46 145 84 HOH HOH . G 5 HOH B 47 146 85 HOH HOH . G 5 HOH B 48 147 87 HOH HOH . G 5 HOH B 49 148 91 HOH HOH . G 5 HOH B 50 149 92 HOH HOH . G 5 HOH B 51 150 93 HOH HOH . G 5 HOH B 52 151 94 HOH HOH . G 5 HOH B 53 152 95 HOH HOH . G 5 HOH B 54 153 96 HOH HOH . G 5 HOH B 55 154 97 HOH HOH . G 5 HOH B 56 155 98 HOH HOH . G 5 HOH B 57 156 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 K54 . . . C 2 15.49 36.759 18.347 1 12.16 ? C1 K54 200 A 1 HETATM 2 F F1 K54 . . . C 2 24.543 26.489 8.997 1 26.59 ? F1 K54 200 A 1 HETATM 3 N N1 K54 . . . C 2 15.03 35.496 18.429 1 11.55 ? N1 K54 200 A 1 HETATM 4 S S1 K54 . . . C 2 16.783 37.02 17.227 1 12.6 ? S1 K54 200 A 1 HETATM 5 C C2 K54 . . . C 2 15.665 34.652 17.571 1 12.09 ? C2 K54 200 A 1 HETATM 6 F F2 K54 . . . C 2 24.722 24.658 10.102 1 24.97 ? F2 K54 200 A 1 HETATM 7 C C3 K54 . . . C 2 16.641 35.345 16.859 1 11.88 ? C3 K54 200 A 1 HETATM 8 F F3 K54 . . . C 2 25.493 24.81 8.068 1 27.31 ? F3 K54 200 A 1 HETATM 9 C C4 K54 . . . C 2 17.429 34.635 15.92 1 11.51 ? C4 K54 200 A 1 HETATM 10 C C5 K54 . . . C 2 17.252 33.241 15.679 1 11.77 ? C5 K54 200 A 1 HETATM 11 C C6 K54 . . . C 2 16.255 32.591 16.399 1 12.15 ? C6 K54 200 A 1 HETATM 12 C C7 K54 . . . C 2 15.48 33.292 17.333 1 12.98 ? C7 K54 200 A 1 HETATM 13 S S8 K54 . . . C 2 18.146 32.367 14.623 1 12.31 ? S8 K54 200 A 1 HETATM 14 O O9 K54 . . . C 2 17.39 31.278 14.062 1 9.86 ? O9 K54 200 A 1 HETATM 15 O O10 K54 . . . C 2 18.656 33.23 13.608 1 10.56 ? O10 K54 200 A 1 HETATM 16 N N11 K54 . . . C 2 19.447 31.72 15.343 1 11.51 ? N11 K54 200 A 1 HETATM 17 C C12 K54 . . . C 2 20.236 32.712 16.107 1 11.7 ? C12 K54 200 A 1 HETATM 18 C C13 K54 . . . C 2 21.72 32.339 16.158 1 11.82 ? C13 K54 200 A 1 HETATM 19 C C14 K54 . . . C 2 22.341 32.306 14.76 1 11.41 ? C14 K54 200 A 1 HETATM 20 C C15 K54 . . . C 2 22.486 33.339 17.023 1 13.32 ? C15 K54 200 A 1 HETATM 21 C C16 K54 . . . C 2 19.171 30.461 16.082 1 11.38 ? C16 K54 200 A 1 HETATM 22 C C17 K54 . . . C 2 20.028 29.332 15.491 1 11.77 ? C17 K54 200 A 1 HETATM 23 O O18 K54 . . . C 2 19.919 28.147 16.292 1 9.46 ? O18 K54 200 A 1 HETATM 24 C C19 K54 . . . C 2 19.638 29.026 14.052 1 11.87 ? C19 K54 200 A 1 HETATM 25 N N20 K54 . . . C 2 20.642 28.169 13.427 1 11.16 ? N20 K54 200 A 1 HETATM 26 C C21 K54 . . . C 2 21.363 28.592 12.378 1 13.77 ? C21 K54 200 A 1 HETATM 27 O O22 K54 . . . C 2 21.325 29.719 11.912 1 11.56 ? O22 K54 200 A 1 HETATM 28 N N24 K54 . . . C 2 22.205 26.016 10.057 1 19.84 ? N24 K54 200 A 1 HETATM 29 C C25 K54 . . . C 2 21.899 27.44 10.256 1 17.58 ? C25 K54 200 A 1 HETATM 30 C C26 K54 . . . C 2 22.173 25.343 11.287 1 16.34 ? C26 K54 200 A 1 HETATM 31 O O27 K54 . . . C 2 22.19 24.132 11.44 1 14.87 ? O27 K54 200 A 1 HETATM 32 O O28 K54 . . . C 2 22.156 26.315 12.356 1 16.19 ? O28 K54 200 A 1 HETATM 33 C C29 K54 . . . C 2 22.283 27.61 11.743 1 15.23 ? C29 K54 200 A 1 HETATM 34 C C32 K54 . . . C 2 18.325 28.229 13.915 1 12.71 ? C32 K54 200 A 1 HETATM 35 C C33 K54 . . . C 2 18.274 26.518 12.056 1 12.36 ? C33 K54 200 A 1 HETATM 36 C C34 K54 . . . C 2 18.072 26.171 10.722 1 13.61 ? C34 K54 200 A 1 HETATM 37 C C35 K54 . . . C 2 17.691 27.126 9.791 1 13 ? C35 K54 200 A 1 HETATM 38 C C36 K54 . . . C 2 17.507 28.441 10.2 1 14.46 ? C36 K54 200 A 1 HETATM 39 C C37 K54 . . . C 2 17.705 28.794 11.538 1 12.39 ? C37 K54 200 A 1 HETATM 40 C C38 K54 . . . C 2 18.088 27.838 12.466 1 12.04 ? C38 K54 200 A 1 HETATM 41 C C40 K54 . . . C 2 21.872 23.604 6.657 1 21.29 ? C40 K54 200 A 1 HETATM 42 C C41 K54 . . . C 2 23.114 23.96 7.176 1 22.5 ? C41 K54 200 A 1 HETATM 43 C C42 K54 . . . C 2 23.202 24.772 8.313 1 22.38 ? C42 K54 200 A 1 HETATM 44 C C43 K54 . . . C 2 22.038 25.216 8.914 1 20.89 ? C43 K54 200 A 1 HETATM 45 C C44 K54 . . . C 2 20.792 24.862 8.402 1 22.42 ? C44 K54 200 A 1 HETATM 46 C C45 K54 . . . C 2 20.702 24.054 7.262 1 23.26 ? C45 K54 200 A 1 HETATM 47 C C46 K54 . . . C 2 24.526 25.175 8.891 1 23.96 ? C46 K54 200 A 1 # _model_server_stats.io_time_ms 102 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 296 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 47 #