data_3MXU # _model_server_result.job_id 3LcBNOPdVzKJu3WviyX2NA _model_server_result.datetime_utc '2024-12-26 11:51:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3mxu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":123}' # _entry.id 3MXU # _exptl.entry_id 3MXU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3MXU _cell.length_a 98.91 _cell.length_b 98.91 _cell.length_c 131.54 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MXU _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 PISA trimeric 3 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E,F 1 1 A,B,C,D,E,F 2 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5 -0.866025 0 0.866025 -0.5 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5 0.866025 0 -0.866025 -0.5 0 0 0 1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 3MXU _atom_sites.fract_transf_matrix[1][1] 0.01011 _atom_sites.fract_transf_matrix[1][2] 0.005837 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011674 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007602 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 123 123 CIT CIT . C 3 SO4 A 1 124 124 SO4 SO4 . D 3 SO4 A 1 125 125 SO4 SO4 . E 4 EDO A 1 126 126 EDO EDO . F 5 HOH A 1 127 127 HOH HOH . F 5 HOH A 2 128 128 HOH HOH . F 5 HOH A 3 129 129 HOH HOH . F 5 HOH A 4 130 130 HOH HOH . F 5 HOH A 5 131 131 HOH HOH . F 5 HOH A 6 132 132 HOH HOH . F 5 HOH A 7 133 133 HOH HOH . F 5 HOH A 8 134 134 HOH HOH . F 5 HOH A 9 135 135 HOH HOH . F 5 HOH A 10 136 136 HOH HOH . F 5 HOH A 11 137 137 HOH HOH . F 5 HOH A 12 138 138 HOH HOH . F 5 HOH A 13 139 139 HOH HOH . F 5 HOH A 14 140 140 HOH HOH . F 5 HOH A 15 141 141 HOH HOH . F 5 HOH A 16 142 142 HOH HOH . F 5 HOH A 17 143 143 HOH HOH . F 5 HOH A 18 144 144 HOH HOH . F 5 HOH A 19 145 145 HOH HOH . F 5 HOH A 20 146 146 HOH HOH . F 5 HOH A 21 147 147 HOH HOH . F 5 HOH A 22 148 148 HOH HOH . F 5 HOH A 23 149 149 HOH HOH . F 5 HOH A 24 150 150 HOH HOH . F 5 HOH A 25 151 151 HOH HOH . F 5 HOH A 26 152 152 HOH HOH . F 5 HOH A 27 153 153 HOH HOH . F 5 HOH A 28 154 154 HOH HOH . F 5 HOH A 29 155 155 HOH HOH . F 5 HOH A 30 156 1 HOH HOH . F 5 HOH A 31 157 157 HOH HOH . F 5 HOH A 32 158 2 HOH HOH . F 5 HOH A 33 159 3 HOH HOH . F 5 HOH A 34 160 4 HOH HOH . F 5 HOH A 35 161 5 HOH HOH . F 5 HOH A 36 162 6 HOH HOH . F 5 HOH A 37 163 7 HOH HOH . F 5 HOH A 38 164 8 HOH HOH . F 5 HOH A 39 165 9 HOH HOH . F 5 HOH A 40 166 10 HOH HOH . F 5 HOH A 41 167 11 HOH HOH . F 5 HOH A 42 168 12 HOH HOH . F 5 HOH A 43 169 13 HOH HOH . F 5 HOH A 44 170 14 HOH HOH . F 5 HOH A 45 171 15 HOH HOH . F 5 HOH A 46 172 16 HOH HOH . F 5 HOH A 47 173 17 HOH HOH . F 5 HOH A 48 174 18 HOH HOH . F 5 HOH A 49 175 19 HOH HOH . F 5 HOH A 50 176 20 HOH HOH . F 5 HOH A 51 177 21 HOH HOH . F 5 HOH A 52 178 22 HOH HOH . F 5 HOH A 53 179 23 HOH HOH . F 5 HOH A 54 180 24 HOH HOH . F 5 HOH A 55 181 25 HOH HOH . F 5 HOH A 56 182 26 HOH HOH . F 5 HOH A 57 183 27 HOH HOH . F 5 HOH A 58 184 28 HOH HOH . F 5 HOH A 59 185 29 HOH HOH . F 5 HOH A 60 186 30 HOH HOH . F 5 HOH A 61 187 31 HOH HOH . F 5 HOH A 62 188 32 HOH HOH . F 5 HOH A 63 189 33 HOH HOH . F 5 HOH A 64 190 34 HOH HOH . F 5 HOH A 65 191 35 HOH HOH . F 5 HOH A 66 192 36 HOH HOH . F 5 HOH A 67 193 37 HOH HOH . F 5 HOH A 68 194 38 HOH HOH . F 5 HOH A 69 195 39 HOH HOH . F 5 HOH A 70 196 40 HOH HOH . F 5 HOH A 71 197 41 HOH HOH . F 5 HOH A 72 198 42 HOH HOH . F 5 HOH A 73 199 43 HOH HOH . F 5 HOH A 74 200 44 HOH HOH . F 5 HOH A 75 201 45 HOH HOH . F 5 HOH A 76 202 46 HOH HOH . F 5 HOH A 77 203 47 HOH HOH . F 5 HOH A 78 204 48 HOH HOH . F 5 HOH A 79 205 49 HOH HOH . F 5 HOH A 80 206 50 HOH HOH . F 5 HOH A 81 207 51 HOH HOH . F 5 HOH A 82 208 52 HOH HOH . F 5 HOH A 83 209 53 HOH HOH . F 5 HOH A 84 210 54 HOH HOH . F 5 HOH A 85 211 55 HOH HOH . F 5 HOH A 86 212 56 HOH HOH . F 5 HOH A 87 213 57 HOH HOH . F 5 HOH A 88 214 58 HOH HOH . F 5 HOH A 89 215 59 HOH HOH . F 5 HOH A 90 216 60 HOH HOH . F 5 HOH A 91 217 61 HOH HOH . F 5 HOH A 92 218 62 HOH HOH . F 5 HOH A 93 219 63 HOH HOH . F 5 HOH A 94 220 64 HOH HOH . F 5 HOH A 95 221 65 HOH HOH . F 5 HOH A 96 222 66 HOH HOH . F 5 HOH A 97 223 67 HOH HOH . F 5 HOH A 98 224 68 HOH HOH . F 5 HOH A 99 225 69 HOH HOH . F 5 HOH A 100 226 70 HOH HOH . F 5 HOH A 101 227 71 HOH HOH . F 5 HOH A 102 228 72 HOH HOH . F 5 HOH A 103 229 73 HOH HOH . F 5 HOH A 104 230 74 HOH HOH . F 5 HOH A 105 231 75 HOH HOH . F 5 HOH A 106 232 76 HOH HOH . F 5 HOH A 107 233 77 HOH HOH . F 5 HOH A 108 234 78 HOH HOH . F 5 HOH A 109 235 79 HOH HOH . F 5 HOH A 110 236 80 HOH HOH . F 5 HOH A 111 237 81 HOH HOH . F 5 HOH A 112 238 82 HOH HOH . F 5 HOH A 113 239 83 HOH HOH . F 5 HOH A 114 240 84 HOH HOH . F 5 HOH A 115 241 85 HOH HOH . F 5 HOH A 116 242 86 HOH HOH . F 5 HOH A 117 243 87 HOH HOH . F 5 HOH A 118 244 88 HOH HOH . F 5 HOH A 119 245 89 HOH HOH . F 5 HOH A 120 246 90 HOH HOH . F 5 HOH A 121 247 91 HOH HOH . F 5 HOH A 122 248 92 HOH HOH . F 5 HOH A 123 249 93 HOH HOH . F 5 HOH A 124 250 94 HOH HOH . F 5 HOH A 125 251 95 HOH HOH . F 5 HOH A 126 252 96 HOH HOH . F 5 HOH A 127 253 97 HOH HOH . F 5 HOH A 128 254 98 HOH HOH . F 5 HOH A 129 255 99 HOH HOH . F 5 HOH A 130 256 100 HOH HOH . F 5 HOH A 131 257 101 HOH HOH . F 5 HOH A 132 258 102 HOH HOH . F 5 HOH A 133 259 103 HOH HOH . F 5 HOH A 134 260 104 HOH HOH . F 5 HOH A 135 261 105 HOH HOH . F 5 HOH A 136 262 106 HOH HOH . F 5 HOH A 137 263 107 HOH HOH . F 5 HOH A 138 264 108 HOH HOH . F 5 HOH A 139 265 109 HOH HOH . F 5 HOH A 140 266 110 HOH HOH . F 5 HOH A 141 267 111 HOH HOH . F 5 HOH A 142 268 112 HOH HOH . F 5 HOH A 143 269 113 HOH HOH . F 5 HOH A 144 270 114 HOH HOH . F 5 HOH A 145 271 115 HOH HOH . F 5 HOH A 146 272 116 HOH HOH . F 5 HOH A 147 273 117 HOH HOH . F 5 HOH A 148 274 118 HOH HOH . F 5 HOH A 149 275 119 HOH HOH . F 5 HOH A 150 276 120 HOH HOH . F 5 HOH A 151 277 121 HOH HOH . F 5 HOH A 152 278 122 HOH HOH . F 5 HOH A 153 279 123 HOH HOH . F 5 HOH A 154 280 124 HOH HOH . F 5 HOH A 155 281 125 HOH HOH . F 5 HOH A 156 282 126 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . B 2 -7.573 5.217 44.388 1 14.51 ? C1 CIT 123 A 1 HETATM 2 O O1 CIT . . . B 2 -6.843 5.853 45.163 1 11.78 ? O1 CIT 123 A 1 HETATM 3 O O2 CIT . . . B 2 -8.047 4.147 44.805 1 13.58 ? O2 CIT 123 A 1 HETATM 4 C C2 CIT . . . B 2 -7.821 5.755 42.992 1 13.28 ? C2 CIT 123 A 1 HETATM 5 C C3 CIT . . . B 2 -9.317 5.887 42.71 1 13.65 ? C3 CIT 123 A 1 HETATM 6 O O7 CIT . . . B 2 -10.046 4.715 43.189 1 13.77 ? O7 CIT 123 A 1 HETATM 7 C C4 CIT . . . B 2 -9.476 5.972 41.188 1 13.34 ? C4 CIT 123 A 1 HETATM 8 C C5 CIT . . . B 2 -10.888 6.257 40.728 1 16.12 ? C5 CIT 123 A 1 HETATM 9 O O3 CIT . . . B 2 -11.811 6.561 41.52 1 16.53 ? O3 CIT 123 A 1 HETATM 10 O O4 CIT . . . B 2 -11.153 6.203 39.498 1 16.65 ? O4 CIT 123 A 1 HETATM 11 C C6 CIT . . . B 2 -9.786 7.165 43.387 1 14.47 ? C6 CIT 123 A 1 HETATM 12 O O5 CIT . . . B 2 -9.552 8.279 42.859 1 13.25 ? O5 CIT 123 A 1 HETATM 13 O O6 CIT . . . B 2 -10.39 7.144 44.478 1 13.79 ? O6 CIT 123 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 13 #