data_3MYU # _model_server_result.job_id yP5-tDENY_CC-4XMqEwX2A _model_server_result.datetime_utc '2024-11-17 13:51:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3myu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2}' # _entry.id 3MYU # _exptl.entry_id 3MYU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3MYU _cell.length_a 49.279 _cell.length_b 90.366 _cell.length_c 175.363 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MYU _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,G 1 1 B,F,H 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3MYU _atom_sites.fract_transf_matrix[1][1] 0.020293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011066 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005702 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 VIB A 1 500 500 VIB VIB . D 3 ACT A 1 1 1 ACT ACT . E 3 ACT A 1 2 2 ACT ACT . F 2 VIB B 1 500 500 VIB VIB . G 4 HOH A 1 7 7 HOH HOH . G 4 HOH A 2 11 11 HOH HOH . G 4 HOH A 3 15 15 HOH HOH . G 4 HOH A 4 16 16 HOH HOH . G 4 HOH A 5 19 19 HOH HOH . G 4 HOH A 6 23 23 HOH HOH . G 4 HOH A 7 369 369 HOH HOH . G 4 HOH A 8 370 370 HOH HOH . G 4 HOH A 9 371 371 HOH HOH . G 4 HOH A 10 372 372 HOH HOH . G 4 HOH A 11 373 373 HOH HOH . G 4 HOH A 12 374 374 HOH HOH . G 4 HOH A 13 375 375 HOH HOH . G 4 HOH A 14 376 376 HOH HOH . G 4 HOH A 15 377 377 HOH HOH . G 4 HOH A 16 378 378 HOH HOH . G 4 HOH A 17 379 379 HOH HOH . G 4 HOH A 18 380 380 HOH HOH . G 4 HOH A 19 381 381 HOH HOH . G 4 HOH A 20 382 382 HOH HOH . G 4 HOH A 21 383 383 HOH HOH . G 4 HOH A 22 384 384 HOH HOH . G 4 HOH A 23 385 385 HOH HOH . G 4 HOH A 24 386 386 HOH HOH . G 4 HOH A 25 387 387 HOH HOH . G 4 HOH A 26 388 388 HOH HOH . G 4 HOH A 27 389 389 HOH HOH . G 4 HOH A 28 390 390 HOH HOH . G 4 HOH A 29 391 391 HOH HOH . G 4 HOH A 30 392 392 HOH HOH . G 4 HOH A 31 393 393 HOH HOH . G 4 HOH A 32 394 394 HOH HOH . G 4 HOH A 33 395 395 HOH HOH . G 4 HOH A 34 396 396 HOH HOH . G 4 HOH A 35 397 397 HOH HOH . G 4 HOH A 36 398 398 HOH HOH . G 4 HOH A 37 399 399 HOH HOH . G 4 HOH A 38 400 400 HOH HOH . G 4 HOH A 39 401 401 HOH HOH . G 4 HOH A 40 402 402 HOH HOH . G 4 HOH A 41 403 403 HOH HOH . G 4 HOH A 42 404 404 HOH HOH . G 4 HOH A 43 405 405 HOH HOH . G 4 HOH A 44 406 406 HOH HOH . G 4 HOH A 45 407 407 HOH HOH . G 4 HOH A 46 408 408 HOH HOH . G 4 HOH A 47 409 409 HOH HOH . G 4 HOH A 48 410 410 HOH HOH . G 4 HOH A 49 411 411 HOH HOH . G 4 HOH A 50 412 412 HOH HOH . G 4 HOH A 51 413 413 HOH HOH . G 4 HOH A 52 414 414 HOH HOH . G 4 HOH A 53 415 415 HOH HOH . G 4 HOH A 54 416 416 HOH HOH . G 4 HOH A 55 417 417 HOH HOH . G 4 HOH A 56 418 418 HOH HOH . G 4 HOH A 57 419 419 HOH HOH . G 4 HOH A 58 420 420 HOH HOH . G 4 HOH A 59 421 421 HOH HOH . G 4 HOH A 60 422 422 HOH HOH . G 4 HOH A 61 423 423 HOH HOH . G 4 HOH A 62 424 424 HOH HOH . G 4 HOH A 63 425 425 HOH HOH . G 4 HOH A 64 426 426 HOH HOH . G 4 HOH A 65 427 427 HOH HOH . G 4 HOH A 66 428 428 HOH HOH . G 4 HOH A 67 429 429 HOH HOH . G 4 HOH A 68 430 430 HOH HOH . G 4 HOH A 69 431 431 HOH HOH . G 4 HOH A 70 432 432 HOH HOH . G 4 HOH A 71 433 433 HOH HOH . G 4 HOH A 72 434 434 HOH HOH . G 4 HOH A 73 435 435 HOH HOH . G 4 HOH A 74 436 436 HOH HOH . G 4 HOH A 75 437 437 HOH HOH . G 4 HOH A 76 438 438 HOH HOH . G 4 HOH A 77 439 439 HOH HOH . H 4 HOH B 1 1 1 HOH HOH . H 4 HOH B 2 2 2 HOH HOH . H 4 HOH B 3 3 3 HOH HOH . H 4 HOH B 4 4 4 HOH HOH . H 4 HOH B 5 5 5 HOH HOH . H 4 HOH B 6 6 6 HOH HOH . H 4 HOH B 7 8 8 HOH HOH . H 4 HOH B 8 9 9 HOH HOH . H 4 HOH B 9 10 10 HOH HOH . H 4 HOH B 10 12 12 HOH HOH . H 4 HOH B 11 13 13 HOH HOH . H 4 HOH B 12 14 14 HOH HOH . H 4 HOH B 13 17 17 HOH HOH . H 4 HOH B 14 18 18 HOH HOH . H 4 HOH B 15 20 20 HOH HOH . H 4 HOH B 16 21 21 HOH HOH . H 4 HOH B 17 22 22 HOH HOH . H 4 HOH B 18 24 24 HOH HOH . H 4 HOH B 19 369 369 HOH HOH . H 4 HOH B 20 370 370 HOH HOH . H 4 HOH B 21 371 371 HOH HOH . H 4 HOH B 22 372 372 HOH HOH . H 4 HOH B 23 373 373 HOH HOH . H 4 HOH B 24 374 374 HOH HOH . H 4 HOH B 25 375 375 HOH HOH . H 4 HOH B 26 376 376 HOH HOH . H 4 HOH B 27 377 377 HOH HOH . H 4 HOH B 28 378 378 HOH HOH . H 4 HOH B 29 379 379 HOH HOH . H 4 HOH B 30 380 380 HOH HOH . H 4 HOH B 31 381 381 HOH HOH . H 4 HOH B 32 382 382 HOH HOH . H 4 HOH B 33 383 383 HOH HOH . H 4 HOH B 34 384 384 HOH HOH . H 4 HOH B 35 385 385 HOH HOH . H 4 HOH B 36 386 386 HOH HOH . H 4 HOH B 37 387 387 HOH HOH . H 4 HOH B 38 388 388 HOH HOH . H 4 HOH B 39 389 389 HOH HOH . H 4 HOH B 40 390 390 HOH HOH . H 4 HOH B 41 391 391 HOH HOH . H 4 HOH B 42 392 392 HOH HOH . H 4 HOH B 43 393 393 HOH HOH . H 4 HOH B 44 394 394 HOH HOH . H 4 HOH B 45 395 395 HOH HOH . H 4 HOH B 46 396 396 HOH HOH . H 4 HOH B 47 397 397 HOH HOH . H 4 HOH B 48 398 398 HOH HOH . H 4 HOH B 49 399 399 HOH HOH . H 4 HOH B 50 400 400 HOH HOH . H 4 HOH B 51 401 401 HOH HOH . H 4 HOH B 52 402 402 HOH HOH . H 4 HOH B 53 403 403 HOH HOH . H 4 HOH B 54 404 404 HOH HOH . H 4 HOH B 55 405 405 HOH HOH . H 4 HOH B 56 406 406 HOH HOH . H 4 HOH B 57 407 407 HOH HOH . H 4 HOH B 58 408 408 HOH HOH . H 4 HOH B 59 409 409 HOH HOH . H 4 HOH B 60 410 410 HOH HOH . H 4 HOH B 61 411 411 HOH HOH . H 4 HOH B 62 412 412 HOH HOH . H 4 HOH B 63 413 413 HOH HOH . H 4 HOH B 64 414 414 HOH HOH . H 4 HOH B 65 415 415 HOH HOH . H 4 HOH B 66 416 416 HOH HOH . H 4 HOH B 67 417 417 HOH HOH . H 4 HOH B 68 418 418 HOH HOH . H 4 HOH B 69 419 419 HOH HOH . H 4 HOH B 70 420 420 HOH HOH . H 4 HOH B 71 421 421 HOH HOH . H 4 HOH B 72 422 422 HOH HOH . H 4 HOH B 73 423 423 HOH HOH . H 4 HOH B 74 424 424 HOH HOH . H 4 HOH B 75 425 425 HOH HOH . H 4 HOH B 76 426 426 HOH HOH . H 4 HOH B 77 427 427 HOH HOH . H 4 HOH B 78 428 428 HOH HOH . H 4 HOH B 79 429 429 HOH HOH . H 4 HOH B 80 430 430 HOH HOH . H 4 HOH B 81 431 431 HOH HOH . H 4 HOH B 82 432 432 HOH HOH . H 4 HOH B 83 433 433 HOH HOH . H 4 HOH B 84 434 434 HOH HOH . H 4 HOH B 85 435 435 HOH HOH . H 4 HOH B 86 436 436 HOH HOH . H 4 HOH B 87 437 437 HOH HOH . H 4 HOH B 88 438 438 HOH HOH . H 4 HOH B 89 439 439 HOH HOH . H 4 HOH B 90 440 440 HOH HOH . H 4 HOH B 91 441 441 HOH HOH . H 4 HOH B 92 442 442 HOH HOH . H 4 HOH B 93 443 443 HOH HOH . H 4 HOH B 94 444 444 HOH HOH . H 4 HOH B 95 445 445 HOH HOH . H 4 HOH B 96 446 446 HOH HOH . H 4 HOH B 97 447 447 HOH HOH . H 4 HOH B 98 448 448 HOH HOH . H 4 HOH B 99 449 449 HOH HOH . H 4 HOH B 100 450 450 HOH HOH . H 4 HOH B 101 451 451 HOH HOH . H 4 HOH B 102 452 452 HOH HOH . H 4 HOH B 103 453 453 HOH HOH . H 4 HOH B 104 454 454 HOH HOH . H 4 HOH B 105 455 455 HOH HOH . H 4 HOH B 106 456 456 HOH HOH . H 4 HOH B 107 457 457 HOH HOH . H 4 HOH B 108 458 458 HOH HOH . H 4 HOH B 109 459 459 HOH HOH . H 4 HOH B 110 460 460 HOH HOH . H 4 HOH B 111 461 461 HOH HOH . H 4 HOH B 112 462 462 HOH HOH . H 4 HOH B 113 463 463 HOH HOH . H 4 HOH B 114 464 464 HOH HOH . H 4 HOH B 115 465 465 HOH HOH . H 4 HOH B 116 466 466 HOH HOH . H 4 HOH B 117 467 467 HOH HOH . H 4 HOH B 118 468 468 HOH HOH . H 4 HOH B 119 469 469 HOH HOH . H 4 HOH B 120 470 470 HOH HOH . H 4 HOH B 121 471 471 HOH HOH . H 4 HOH B 122 472 472 HOH HOH . H 4 HOH B 123 473 473 HOH HOH . H 4 HOH B 124 474 474 HOH HOH . H 4 HOH B 125 475 475 HOH HOH . H 4 HOH B 126 476 476 HOH HOH . H 4 HOH B 127 477 477 HOH HOH . H 4 HOH B 128 478 478 HOH HOH . H 4 HOH B 129 479 479 HOH HOH . H 4 HOH B 130 480 480 HOH HOH . H 4 HOH B 131 481 481 HOH HOH . H 4 HOH B 132 482 482 HOH HOH . H 4 HOH B 133 483 483 HOH HOH . H 4 HOH B 134 484 484 HOH HOH . H 4 HOH B 135 485 485 HOH HOH . H 4 HOH B 136 486 486 HOH HOH . H 4 HOH B 137 487 487 HOH HOH . H 4 HOH B 138 488 488 HOH HOH . H 4 HOH B 139 489 489 HOH HOH . H 4 HOH B 140 490 490 HOH HOH . H 4 HOH B 141 491 491 HOH HOH . H 4 HOH B 142 492 492 HOH HOH . H 4 HOH B 143 493 493 HOH HOH . H 4 HOH B 144 494 494 HOH HOH . H 4 HOH B 145 495 495 HOH HOH . H 4 HOH B 146 496 496 HOH HOH . H 4 HOH B 147 497 497 HOH HOH . H 4 HOH B 148 498 498 HOH HOH . H 4 HOH B 149 499 499 HOH HOH . H 4 HOH B 150 501 501 HOH HOH . H 4 HOH B 151 502 502 HOH HOH . H 4 HOH B 152 503 503 HOH HOH . H 4 HOH B 153 504 504 HOH HOH . H 4 HOH B 154 505 505 HOH HOH . H 4 HOH B 155 506 506 HOH HOH . H 4 HOH B 156 507 507 HOH HOH . H 4 HOH B 157 508 508 HOH HOH . H 4 HOH B 158 509 509 HOH HOH . H 4 HOH B 159 510 510 HOH HOH . H 4 HOH B 160 511 511 HOH HOH . H 4 HOH B 161 512 512 HOH HOH . H 4 HOH B 162 513 513 HOH HOH . H 4 HOH B 163 514 514 HOH HOH . H 4 HOH B 164 515 515 HOH HOH . H 4 HOH B 165 516 516 HOH HOH . H 4 HOH B 166 517 517 HOH HOH . H 4 HOH B 167 518 518 HOH HOH . H 4 HOH B 168 519 519 HOH HOH . H 4 HOH B 169 520 520 HOH HOH . H 4 HOH B 170 521 521 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . E 3 -16.818 30.351 12.79 1 32.04 ? C ACT 2 A 1 HETATM 2 O O ACT . . . E 3 -16.872 30.535 11.594 1 42.9 ? O ACT 2 A 1 HETATM 3 O OXT ACT . . . E 3 -15.773 29.739 13.06 1 44.23 -1 OXT ACT 2 A 1 HETATM 4 C CH3 ACT . . . E 3 -17.888 30.811 13.74 1 46.77 ? CH3 ACT 2 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 4 #