data_3MYZ # _model_server_result.job_id C3AqyRerBVt3B9ILKPea1w _model_server_result.datetime_utc '2024-11-19 10:23:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3myz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":100}' # _entry.id 3MYZ # _exptl.entry_id 3MYZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 200.59 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MERCURY (II) ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.42 _cell.angle_gamma 90 _cell.entry_id 3MYZ _cell.length_a 48.349 _cell.length_b 28.467 _cell.length_c 74.983 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3MYZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,K 1 1 B,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 26 A CYS 25 1_555 A SG CYS 81 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? metalc ? metalc1 A NE2 HIS 52 A HIS 51 1_555 C HG HG . A HG 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? # _chem_comp.formula 'Hg 2' _chem_comp.formula_weight 200.59 _chem_comp.id HG _chem_comp.mon_nstd_flag . _chem_comp.name 'MERCURY (II) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3MYZ _atom_sites.fract_transf_matrix[1][1] 0.020683 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000513 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.035128 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01334 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HG A 1 100 100 HG HG . D 3 TFX A 1 101 101 TFX TFX . E 3 TFX A 1 102 102 TFX TFX . F 4 TLA A 1 501 501 TLA TLA . G 5 ACT A 1 1428 1428 ACT ACT . H 5 ACT A 1 103 103 ACT ACT . I 3 TFX B 1 101 101 TFX TFX . J 5 ACT B 1 1428 1428 ACT ACT . K 6 HOH A 1 104 104 HOH HOH . K 6 HOH A 2 105 105 HOH HOH . K 6 HOH A 3 106 106 HOH HOH . K 6 HOH A 4 107 107 HOH HOH . K 6 HOH A 5 108 108 HOH HOH . K 6 HOH A 6 109 109 HOH HOH . K 6 HOH A 7 110 110 HOH HOH . K 6 HOH A 8 111 111 HOH HOH . K 6 HOH A 9 112 112 HOH HOH . K 6 HOH A 10 113 113 HOH HOH . K 6 HOH A 11 114 114 HOH HOH . K 6 HOH A 12 115 115 HOH HOH . K 6 HOH A 13 116 116 HOH HOH . K 6 HOH A 14 117 117 HOH HOH . K 6 HOH A 15 118 118 HOH HOH . K 6 HOH A 16 119 119 HOH HOH . K 6 HOH A 17 120 120 HOH HOH . K 6 HOH A 18 121 121 HOH HOH . K 6 HOH A 19 122 122 HOH HOH . K 6 HOH A 20 123 123 HOH HOH . K 6 HOH A 21 124 124 HOH HOH . K 6 HOH A 22 125 125 HOH HOH . K 6 HOH A 23 126 126 HOH HOH . K 6 HOH A 24 127 127 HOH HOH . K 6 HOH A 25 128 128 HOH HOH . K 6 HOH A 26 129 129 HOH HOH . K 6 HOH A 27 130 130 HOH HOH . K 6 HOH A 28 131 131 HOH HOH . K 6 HOH A 29 132 132 HOH HOH . K 6 HOH A 30 133 133 HOH HOH . K 6 HOH A 31 134 134 HOH HOH . K 6 HOH A 32 135 135 HOH HOH . K 6 HOH A 33 136 136 HOH HOH . K 6 HOH A 34 137 137 HOH HOH . K 6 HOH A 35 138 138 HOH HOH . K 6 HOH A 36 139 139 HOH HOH . K 6 HOH A 37 140 140 HOH HOH . K 6 HOH A 38 141 141 HOH HOH . K 6 HOH A 39 142 142 HOH HOH . K 6 HOH A 40 143 143 HOH HOH . K 6 HOH A 41 144 144 HOH HOH . K 6 HOH A 42 145 145 HOH HOH . K 6 HOH A 43 146 146 HOH HOH . K 6 HOH A 44 147 147 HOH HOH . K 6 HOH A 45 148 148 HOH HOH . K 6 HOH A 46 149 149 HOH HOH . K 6 HOH A 47 150 150 HOH HOH . K 6 HOH A 48 151 151 HOH HOH . K 6 HOH A 49 152 152 HOH HOH . K 6 HOH A 50 153 153 HOH HOH . K 6 HOH A 51 154 154 HOH HOH . K 6 HOH A 52 155 155 HOH HOH . K 6 HOH A 53 156 156 HOH HOH . K 6 HOH A 54 157 157 HOH HOH . K 6 HOH A 55 158 158 HOH HOH . K 6 HOH A 56 159 159 HOH HOH . K 6 HOH A 57 160 160 HOH HOH . K 6 HOH A 58 161 161 HOH HOH . K 6 HOH A 59 162 162 HOH HOH . K 6 HOH A 60 163 163 HOH HOH . K 6 HOH A 61 164 164 HOH HOH . K 6 HOH A 62 165 165 HOH HOH . K 6 HOH A 63 166 166 HOH HOH . K 6 HOH A 64 167 167 HOH HOH . K 6 HOH A 65 168 168 HOH HOH . K 6 HOH A 66 169 169 HOH HOH . K 6 HOH A 67 170 170 HOH HOH . K 6 HOH A 68 171 171 HOH HOH . K 6 HOH A 69 172 172 HOH HOH . K 6 HOH A 70 173 173 HOH HOH . K 6 HOH A 71 174 174 HOH HOH . K 6 HOH A 72 175 175 HOH HOH . L 6 HOH B 1 100 100 HOH HOH . L 6 HOH B 2 102 102 HOH HOH . L 6 HOH B 3 103 103 HOH HOH . L 6 HOH B 4 104 104 HOH HOH . L 6 HOH B 5 105 105 HOH HOH . L 6 HOH B 6 106 106 HOH HOH . L 6 HOH B 7 107 107 HOH HOH . L 6 HOH B 8 108 108 HOH HOH . L 6 HOH B 9 109 109 HOH HOH . L 6 HOH B 10 110 110 HOH HOH . L 6 HOH B 11 111 111 HOH HOH . L 6 HOH B 12 112 112 HOH HOH . L 6 HOH B 13 113 113 HOH HOH . L 6 HOH B 14 114 114 HOH HOH . L 6 HOH B 15 115 115 HOH HOH . L 6 HOH B 16 116 116 HOH HOH . L 6 HOH B 17 117 117 HOH HOH . L 6 HOH B 18 118 118 HOH HOH . L 6 HOH B 19 119 119 HOH HOH . L 6 HOH B 20 120 120 HOH HOH . L 6 HOH B 21 121 121 HOH HOH . L 6 HOH B 22 122 122 HOH HOH . L 6 HOH B 23 123 123 HOH HOH . L 6 HOH B 24 124 124 HOH HOH . L 6 HOH B 25 125 125 HOH HOH . L 6 HOH B 26 126 126 HOH HOH . L 6 HOH B 27 127 127 HOH HOH . L 6 HOH B 28 128 128 HOH HOH . L 6 HOH B 29 129 129 HOH HOH . L 6 HOH B 30 130 130 HOH HOH . L 6 HOH B 31 131 131 HOH HOH . L 6 HOH B 32 132 132 HOH HOH . L 6 HOH B 33 133 133 HOH HOH . L 6 HOH B 34 134 134 HOH HOH . L 6 HOH B 35 135 135 HOH HOH . L 6 HOH B 36 136 136 HOH HOH . L 6 HOH B 37 137 137 HOH HOH . L 6 HOH B 38 138 138 HOH HOH . L 6 HOH B 39 139 139 HOH HOH . L 6 HOH B 40 140 140 HOH HOH . L 6 HOH B 41 141 141 HOH HOH . L 6 HOH B 42 142 142 HOH HOH . L 6 HOH B 43 143 143 HOH HOH . L 6 HOH B 44 144 144 HOH HOH . L 6 HOH B 45 145 145 HOH HOH . L 6 HOH B 46 146 146 HOH HOH . L 6 HOH B 47 147 147 HOH HOH . L 6 HOH B 48 148 148 HOH HOH . L 6 HOH B 49 149 149 HOH HOH . L 6 HOH B 50 150 150 HOH HOH . L 6 HOH B 51 151 151 HOH HOH . L 6 HOH B 52 152 152 HOH HOH . L 6 HOH B 53 153 153 HOH HOH . L 6 HOH B 54 154 154 HOH HOH . L 6 HOH B 55 155 155 HOH HOH . L 6 HOH B 56 156 156 HOH HOH . L 6 HOH B 57 157 157 HOH HOH . L 6 HOH B 58 158 158 HOH HOH . L 6 HOH B 59 159 159 HOH HOH . L 6 HOH B 60 160 160 HOH HOH . L 6 HOH B 61 161 161 HOH HOH . L 6 HOH B 62 162 162 HOH HOH . L 6 HOH B 63 163 163 HOH HOH . L 6 HOH B 64 164 164 HOH HOH . L 6 HOH B 65 165 165 HOH HOH . L 6 HOH B 66 166 166 HOH HOH . L 6 HOH B 67 167 167 HOH HOH . L 6 HOH B 68 168 168 HOH HOH . L 6 HOH B 69 169 169 HOH HOH . L 6 HOH B 70 170 170 HOH HOH . L 6 HOH B 71 171 171 HOH HOH . L 6 HOH B 72 172 172 HOH HOH . L 6 HOH B 73 173 173 HOH HOH . L 6 HOH B 74 174 174 HOH HOH . L 6 HOH B 75 175 175 HOH HOH . L 6 HOH B 76 176 176 HOH HOH . L 6 HOH B 77 177 177 HOH HOH . L 6 HOH B 78 178 178 HOH HOH . L 6 HOH B 79 179 179 HOH HOH . L 6 HOH B 80 180 180 HOH HOH . L 6 HOH B 81 181 181 HOH HOH . L 6 HOH B 82 182 182 HOH HOH . L 6 HOH B 83 183 183 HOH HOH . L 6 HOH B 84 184 184 HOH HOH . L 6 HOH B 85 185 185 HOH HOH . L 6 HOH B 86 186 186 HOH HOH . L 6 HOH B 87 187 187 HOH HOH . L 6 HOH B 88 188 188 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol HG _atom_site.label_atom_id HG _atom_site.label_comp_id HG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x 22.739 _atom_site.Cartn_y -14.825 _atom_site.Cartn_z 8.908 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 278.26 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id HG _atom_site.auth_comp_id HG _atom_site.auth_seq_id 100 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 280 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #